Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d047739_T012
CDS Infomation

cds chromosome:B73_RefGen_v4:9:140341364:140351748:1 gene:Zm00001d047739 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phosphoinositide phosphatase SAC8
Sequence

ATGGCGAACGCCGACGCCGACGAAGCGCCGCTGCTCTCTGTGGAACACCTCCGTCCAGGA
TCCTGCAGCCGCGAGCTCGAGCTGCGGGAGTTCCGCGACCGCTACGTGATCCGTTCGCTC
GACGGCGCCGCCGCTTTCGCCGTCCTTCGCTCCGGCGGCTCCATCCGCCCTCTCTCCCCA
GAGGAAGCCGTAGCTGAGAGCGACTGCAAGGTTTCCAGAATATACGGCGTGGTCGGCACC
ATAAGATTGCTCGCTGGAAGCTATGTACTCGTTATCACTTCTCAGAAAGATGCTGGCTCT
TATCTGGGCTCCCCTGTGTACCAAGTGAACTCAATGAAATTCTTATGCTGCAACGAGGCT
ATCAAGCACTTGACTCCACAGGAAAGAAGGGATGAGGCATACTTCATGTCTCTCCTGAGA
ATTGCAGAAACTACTTGTGGATTGTATTATTCATATGACAGGGATTTGACACTAAAGTAA

Peptide Sequence

PEP ID

Zm00001d047739_P012
PEP Infomation

pep chromosome:B73_RefGen_v4:9:140341364:140351748:1 gene:Zm00001d047739 transcript:Zm00001d047739_T012 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phosphoinositide phosphatase SAC8
Sequence

MANADADEAPLLSVEHLRPGSCSRELELREFRDRYVIRSLDGAAAFAVLRSGGSIRPLSP
EEAVAESDCKVSRIYGVVGTIRLLAGSYVLVITSQKDAGSYLGSPVYQVNSMKFLCCNEA
IKHLTPQERRDEAYFMSLLRIAETTCGLYYSYDRDLTLK

Transcript Sequence

Transcript ID

Zm00001d047739_T012
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:140341364:140351748:1 gene:Zm00001d047739 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phosphoinositide phosphatase SAC8
Sequence

GAGTCTCTCCCGGTTCGGATCCAAATTCAGCAATCCGACCTGAGACCAAGACCGCGCACC
ACGCGGCTCGCCGCCGATGGCGAACGCCGACGCCGACGAAGCGCCGCTGCTCTCTGTGGA
ACACCTCCGTCCAGGATCCTGCAGCCGCGAGCTCGAGCTGCGGGAGTTCCGCGACCGCTA
CGTGATCCGTTCGCTCGACGGCGCCGCCGCTTTCGCCGTCCTTCGCTCCGGCGGCTCCAT
CCGCCCTCTCTCCCCAGAGGAAGCCGTAGCTGAGAGCGACTGCAAGGTTTCCAGAATATA
CGGCGTGGTCGGCACCATAAGATTGCTCGCTGGAAGCTATGTACTCGTTATCACTTCTCA
GAAAGATGCTGGCTCTTATCTGGGCTCCCCTGTGTACCAAGTGAACTCAATGAAATTCTT
ATGCTGCAACGAGGCTATCAAGCACTTGACTCCACAGGAAAGAAGGGATGAGGCATACTT
CATGTCTCTCCTGAGAATTGCAGAAACTACTTGTGGATTGTATTATTCATATGACAGGGA
TTTGACACTAAAGTAAGTGCTTTGTCATGCATGTATCTGAATAAGGCAACCAAAAGACAT
TGGCTTAATATTCAGAAAAGGCCAACAACCTTTGTGTAGTGATTATGCACATCCTTAAGA
TATTTTTTTTTCTCAAACAACACATGAGAACTGTGTGCATTTCATTAAGTAGAGAAAAAA
AACCAAAGGAGAAGCAGTGTGTGGCGCTGTTAGCCTTGTACTAGGTGGCCTAGGGAAGTT
GGCCTCCTGGAAAAAAGCCGAAACAGTCAGAGCACCCTGAATGTCCTGGATCCAGAGATT
CTGATCTAAATCCTCCTGTACCGTTCATCTCCTCGTCGACATTTGTAACTAATCGATTGC
CTGTTAGTTCCATTGTTCCTTGCAGATGTGTAGTAGGTTCTTGAAGTATGGATCTATTGA
GCACTTCTTAAGAGGTTCTAGTTGTATGACTGTTATCATGTACTGAATGCCTCTGTGGTG
CATTTATTTTTCTTTTGTTATACTGGATTGTATCTAACTGATGAGATAGAAATAATGCGA
TGATGGAATGCTCCTCAATGTAAAGCTATAAACACTATGATTATGTAGCTTGCAGAGGGC
ATCCAAGTTGGCTGCTGGGAGGGTACATAAACCACTATGGAAGCAGGTTCGTGATTATTT
GTCATTTGATATGTCCCACGGTACTCAAATCTTTGTGGCTTAGTTAGTTTTTTAGCCTGT
TGGCAGTTAGATACACACTTCTACATTGAAATGTGGTCGAATTAGGAGTGACTAAAATGC
ATTTGCAATTTCAAAGACGTGTATTTGTAACTTGAGGAAGGAAAGCTTGAATATAAGCCC
TGGACGGTTTAACGATTTGTGGAATATAAATATAACAGGTAACGTATCACATACTATTAG
ATATTGTGCAGTATTTGTCATCCGCCTTGTTTACTCACCACTAGTTATTTTTGATTGAGC
TTATCGGAGCATGAGTTGGAATGAGTGAAACCCTATTCCTAATCCTACAAAATACAACAT
GTGCTGATGGTGTCTATCCTTTCTACCATGTGTGTTTAATCCTAGAAAAGGATAGGTTGA
ACTTGATTGGGACACGAACCTTGCTTGTAATATATTTATATTTGAATGCAATTTTTTTGT
GCTTACCCTTCAAAGTTTGATGTGCCAAGTCAAGATGTTGGAAGACATGCTAAAAAACTT
CCAAAACAAAACACATATTTTCCTTGTAGTTGTGCACAAATTTCGATCTTTTTTCTTTCC
AGATAAGGGATCATGATATTACCCCCTATTAAGATCTAGTTGCATACCATGGAGAATCTC
GATGGGCACGTGATTGTAGATGGTGGAGGCGGGGCGCCTATTGAGGAGGCAGGTGGCGGT
TGCTATGGCTTCAACCTAATAAGGGGATGACGTGGAGGCATGGAGCAGTGTGCAGATGGA
GTTGTTAAGTGTATGGAGGATACATTCAGTTTTGCCATTGTAAGCGGAGGTGTAAGGGTA
GAATAGGCATAACAGGGTGCTATGAGAAACAAGGAGTTGGTGGCATTATAACAAATTATT
TACCATTATCAACCTGAAACACTTGATGAGCGAGTTGAATTGGGTACGCGCAACTGAAAG
AAATGGGTGATTAACCAGTGCACTTCAGACTTGCGTTGCATGGGAAACGTCCAACAAACA
CGACTAAAATCATCGAAAAAAACTCGGACGGGGAGGGAAAGACCGCCCTCCCGGTAGTGT
ATTAAGAAGAGATCGAAACATGGTCCCGACCGAGAAAACCCCCGAACCCTGGCCCTCCAT
CACTAACGGGTGCCCACTCTGCAACGGCCCAGTCGGAGGGTGGCGCATAGGATATCGATC
CCCGAGAGCAGACGAGACACATCGAGGGGATTTTTTAACCAAGCCCAAAATTCGCTCTTA
AATGGGGGGGGGGGGTCGAACTCGAGACCTGGAGGTGCTACTTGGAAGCCTTAACCATTA
CGCTAGAGGCCCTTTCACGACTAAAATCATTGAGAATGACAAGATAGTAAAGACAACCCA
AAATACTAGGAACCAGAGAAGTTTAGACATCACAATGAAACTCAACCTGCTGGGGGTAAG
ACAACCCCCGAGTATTGTATTAAGAAAACCTTTTCACACAGGTCGAGAAAACCCCCAAAC
CTCTACCCCACCCATACACAGTGGCATCGAAGCCCATGTGAGAACGGTCGCGATCGAGGC
TGAGCCTTAGACCTGTGCTTTGACGTGGGACAGAGACGAGGGGATTTTTTAACCACAACC
TGAAATTCGCTCCCACGGGGAGTTGAGCCCAGGACCTGAGGAGTGCTACTCAGACCACCT
AACCAACTTGGCTAGAGGCCCTTTCGCAGACATCACAATGAAGAAGCTCGAAAGGAGCAG
AAGTGCATGAAATCGAACTAGCAAAACTGCAAAAGGTAGCTACGAATGTTTGCCAAGGAG
TGTCAAATAGAGCGATCTATTTTATTACAGGAGATGACTTTGGTGAGCAAGACACTGGTG
TCCTGGACTCCTGGTGCCACACGACGAAGGGGACGACGAGGTGGGCATGAGCAGCAACAA
CATCGGGCAAGGTGTAGAGGTTGTCGTCATTAGCGCAGCGAACATCTCTCGTATGGTCTG
AAGATCCTTAATAGAGAAACCAAAGGGTCAAATTTAATGGAGCAAAGGTTGTCGCGATTA
AACTGATGTACGAACAACAAATTACGAACGAGAGAGGGGACAACAAGAACATTACCAAGA
TGAAAAGTAGAGGATGAAGTTGGAAGAAGGGAGTGTCCTTGGGCAAGAACAATAAAGGAA
TTGCTATTGCCAACAATAATGGAAGAGTGGAAGGGAGTAAAGTTGGAGTATACCATCCGA
TGATGACATGTGGGAGGTGGTGCCGGTGTTGAGGACCCAGGGGTTGGATCCCTGGAGTTG
TAGCTGTTGTAGGGCAGCCATCATCATCCCAGATGGGTTCCAGCTGGGGAGGCGCTTGAT
ACTGCCACCTAGGGGCAGGTTGAGACCAGCCCCCAACTTATTGCGGTCATGGCTAGGTGA
TTGAAGGCGCTTAGGAGCCAACAAAGGTGTTGTTGTCTTGAGGATAAGGCCCAGGCAGAC
TTGTAGATGGTGCGCACCAAGTATGACAAGTAGGCGGCATGCTCCACGAGTTGAAATAGA
CCCATGGGCCAAAAGGATAGGGCCCTGCTTGCTCCTCGTCCCCGTGACCTTTGCACCGGT
TGCGGCCACCACCTACAGGTGCAGCGCCCGCACTTGCTTTTGTCAGGGAAGCAGGGCCCT
TGCAGTCGCTAGAACAACCTCCACCACTGTCGGTGCCACTGGTGAGGAGGGCGGTAGCTT
AGGCATTTTTCGCGTAATCGGTGAGGCACGGTTCTTTGAGGACCAATATGTTGTGTGCTT
AGATGAAGGATGACAAGGGTTTGGCATTGGCTATGTTGTTGGCGGTGTTGGTGTAGCAGG
CGTTGAGGCCGCGGAGGAAGTTTAGGACGAGCTGGGGATCGTCGATGACGATGCAAACAT
CACGTAGGGCGTGAACAAGGGTCTTTATCCGTTTGCGATACTCGTTGATGGACAGATCGC
CCTAGGTCATGGAGTGAAACACATGACTTAGAAAGATTGCCTGTGGAGCTTTGTTTTTTT
TACGGCGCAAGGAAGCCCCTACAACACGATTTTATTAAAACAAAGGAAAACAGATTTTAC
AAAGGTGACAAACAAACAT