Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d047717_T031
CDS Infomation

cds chromosome:B73_RefGen_v4:9:139871817:139886403:-1 gene:Zm00001d047717 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAAAGATCTTTTCAGTGATGAGACTGGCAACTATATGGAAGCAGAAAACAAGTATAGT
CGTGCTATGCGAGGTGCACCTGCAGATTCACTTTTTGGCCAGTTCTGTTTGCATGCACTG
TGGTTTGGCAACTGCAATATATGCGCAATTGCTACACTATGGATTGATTTTGTGCGGGAA
ATTCGTTGGTGCTGGGAGGAATCAGAAAGATTGCCTAGGATGAAAAGCACTTCAAGCATT
GATCTCTCTTCTTGTCTTATCCACCAAAAGTTACAAATGCTCACGATATGCATTGAGAGG
AAGAGATCACTGAACCGTGAGAAAGGTACTGGCTACAAAGATGAGACTTCAAATAGTACG
GCAGTGAACAAGTCTAGGAAAGGATCAGCTGGTGTTGTGCCTAAAATGATGCTCCTGAAT
ACGTTTCAGGAAATGCATGCTCCATATACTCAGGATGCACCTTTGATGACCGAAGATATG
CATGAAGAAAGGCTCCATGCAGCTGAAGCTTTTGGCAATGCCATTGGTCTATCTGGACAG
CTGGAAAGGGATATATTATGTTCCGATATGTCTGCTTTTAAAGCTGCAAACCCAGATGCT
GTCTTTGAAGATTTTATTCGGTGGCATTCACCTGGTGAATGGTTGAGCGAGGACAAAACA
GATGGTAATGCAGGCTGGCCTCCCAAAGGAAAGCTTTCTCACCGTATGTCCCAACATGGG
AATGTGTGGCGCAAAATCTGGAATGATGCTCTGCCATTGCCTGTTTCTGAACAGAAGTCT
TTGCTTGACCCTGTTCGGGAAGGAGAAAAGGTGCTTCATTACCTTGAAACTTTAAGGCCA
CAGCAGCTCCTTGAACAAATGGTGTGTACAGCTTTCAAATCATCAGCTGATATCCTGAAT
AAGACCATGTATGGTGGCTTCAAGGAAATGAAGACAAAAATGGATCGACTATATGTCACC
ATGGCGTCAACACTGAAATCTTTTCTAGGGAATTCTGATGTCAATGATTTGGTTGGAGGC
CTGAAACGGCTTTGTCAAGTTTTTGAGCACATCGAGAAGTTACTGATTCTTGCTGCTTCC
ATCAATCGGAAGCTTATTGATGCTCCACGACTAGCTCAAGCAATATTTTACGACTACTAC
AACTTCTACCTTCCAAAAATGGGAACTAGCCTGGAAAGCATTTGCTATGAGAAGGAGTTC
ACAACTAAGGAAAAGGTCGGGATGTATGAGAGAGATGCTGTGTCGAACCTGTTTCCTCCC
CCTACTGCTAATCAGTCTTGGAGGAAAGTTTTGAGCATGGGAAATCTTCTGAACGGCCAT
GAACCGATGCAAAGGGAAATCATATTCTCAGTCCAGGAGAGAATAAGCAACGGTCATTAT
TCGAGCCCAACCCCATTATGTACCAACAATGAGAAGATCCAGACACATAGGATGTATATA
TCTGGGACATCTAATGACCTTTGGGTTGCATTGTCTGTAACGTCCTGGGATTGA

Peptide Sequence

PEP ID

Zm00001d047717_P031
PEP Infomation

pep chromosome:B73_RefGen_v4:9:139871817:139886403:-1 gene:Zm00001d047717 transcript:Zm00001d047717_T031 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MKDLFSDETGNYMEAENKYSRAMRGAPADSLFGQFCLHALWFGNCNICAIATLWIDFVRE
IRWCWEESERLPRMKSTSSIDLSSCLIHQKLQMLTICIERKRSLNREKGTGYKDETSNST
AVNKSRKGSAGVVPKMMLLNTFQEMHAPYTQDAPLMTEDMHEERLHAAEAFGNAIGLSGQ
LERDILCSDMSAFKAANPDAVFEDFIRWHSPGEWLSEDKTDGNAGWPPKGKLSHRMSQHG
NVWRKIWNDALPLPVSEQKSLLDPVREGEKVLHYLETLRPQQLLEQMVCTAFKSSADILN
KTMYGGFKEMKTKMDRLYVTMASTLKSFLGNSDVNDLVGGLKRLCQVFEHIEKLLILAAS
INRKLIDAPRLAQAIFYDYYNFYLPKMGTSLESICYEKEFTTKEKVGMYERDAVSNLFPP
PTANQSWRKVLSMGNLLNGHEPMQREIIFSVQERISNGHYSSPTPLCTNNEKIQTHRMYI
SGTSNDLWVALSVTSWD

Transcript Sequence

Transcript ID

Zm00001d047717_T031
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:139871817:139886403:-1 gene:Zm00001d047717 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATCGACGCAACACTCTCCTCCGCTTCCCTTCTCCTCAGTCGCGGCTCACCCCCTCCCCCT
TGCCGATCTAACGGGAACGCGTCTCACAGCTTCCACGCGACTGCACCGTGCCACCCGAGG
CTCGCCCCCGCTGAGCCAGCGGAGCGAATCTCCATGGCCTCCACATCCTCCTCCAGGTAC
GCGAAACATCGTCGGATCGGAGAGGACGATGAGTTGGAGGAGGTTGAGGAGGAGGCCGAA
GAGGAGGTTGATGCTATCCAAGTTTATTATCCTCATGTTTGGTCAATTTTACTTATGCAT
AAAGGATTGTTAACAGTTTCTTAACATCTAGGTTTATATCTGAGATAGAGGCTATTTGCC
GTCAATGGCTTGCAGATGGCGCAAAGATCTTAATGCAAAAAGGTGCAGAGGGTGTTCCTC
CTTTTGAAAACTTATATATGATCAAGCGTGAATTGAAGCATGGGAAAAGAGTCTATTCTA
TGGAGTACCATTTCATGAAATCTGCAAAAGGTCAAAACTCATATTGGGACGATGACACAC
ATAGCATGCAGCTCTCATTTGGAGTTGATGAGTTTTTGATAATTGCTCCGCTGAGTGCCA
GTGGTGTGATCCTCGATGATCCAGAATCAACTAAGCTTTTGAGTTCTGTAGCAATTGCTC
TTTCTAATTGTGGCAGCAATTGGCCAGCGTTTGTACCAGTTCACGACCCTTCACGGAAAG
CCTATATAGGGATTCAAAATCTGGGAACTGTATTTACTCGAAGATTTGAAGCTGACCGAA
TTGGTAGTCAAGTGCCAATAAGACTCATGCATCTGGAGGGGTTACATGAGCTATTTCTGT
CAAAATTTGTCCTATCCTCGTCAGATTTTCCAGCTAGGGTAAAGGTTCACTTCTCAATGA
AGCTTAGCTACAAGACCCCAGAATATGATCATGATAATGAAACTTTAGATTCTGAAGCTA
CTGAGCCATTGACTGAAAATGAAGTTGTGAACCACCCTAGAAAACTATGGGACGATGATT
GCCCTTGGGCAGAGTGGTACTCTGCTGAGGATCCTGTTAAAGGTTTTGAGTTGACTGCCA
TCTGGGGAGAGAGGACATTTGAAGAGACCCTTGAGATGGCTGAAGTGGAAAATGCCTCGT
CCTTTGATGCTGATAGCTGGTTCCTTCACCCAGTTGTATCTCGATACATGGTAGATGATT
CTATTGGAAAATTTGTTGGGTTTGCATCCCAGCTACATCTTCTAGTAAATGCATATGAAT
CATCAGTGGAGGCACAATTTCTAGAAGACTTTGTTGCAGGATACTTCAGGCCAGGATAAT
GCAAAATCTACTGCTACTGTGCCTCCACCATCAGTTATTGATCGTGTTATGAAAGATCTT
TTCAGTGATGAGACTGGCAACTATATGGAAGCAGAAAACAAGTATAGTCGTGCTATGCGA
GGTGCACCTGCAGATTCACTTTTTGGCCAGTTCTGTTTGCATGCACTGTGGTTTGGCAAC
TGCAATATATGCGCAATTGCTACACTATGGATTGATTTTGTGCGGGAAATTCGTTGGTGC
TGGGAGGAATCAGAAAGATTGCCTAGGATGAAAAGCACTTCAAGCATTGATCTCTCTTCT
TGTCTTATCCACCAAAAGTTACAAATGCTCACGATATGCATTGAGAGGAAGAGATCACTG
AACCGTGAGAAAGGTACTGGCTACAAAGATGAGACTTCAAATAGTACGGCAGTGAACAAG
TCTAGGAAAGGATCAGCTGGTGTTGTGCCTAAAATGATGCTCCTGAATACGTTTCAGGAA
ATGCATGCTCCATATACTCAGGATGCACCTTTGATGACCGAAGATATGCATGAAGAAAGG
CTCCATGCAGCTGAAGCTTTTGGCAATGCCATTGGTCTATCTGGACAGCTGGAAAGGGAT
ATATTATGTTCCGATATGTCTGCTTTTAAAGCTGCAAACCCAGATGCTGTCTTTGAAGAT
TTTATTCGGTGGCATTCACCTGGTGAATGGTTGAGCGAGGACAAAACAGATGGTAATGCA
GGCTGGCCTCCCAAAGGAAAGCTTTCTCACCGTATGTCCCAACATGGGAATGTGTGGCGC
AAAATCTGGAATGATGCTCTGCCATTGCCTGTTTCTGAACAGAAGTCTTTGCTTGACCCT
GTTCGGGAAGGAGAAAAGGTGCTTCATTACCTTGAAACTTTAAGGCCACAGCAGCTCCTT
GAACAAATGGTGTGTACAGCTTTCAAATCATCAGCTGATATCCTGAATAAGACCATGTAT
GGTGGCTTCAAGGAAATGAAGACAAAAATGGATCGACTATATGTCACCATGGCGTCAACA
CTGAAATCTTTTCTAGGGAATTCTGATGTCAATGATTTGGTTGGAGGCCTGAAACGGCTT
TGTCAAGTTTTTGAGCACATCGAGAAGTTACTGATTCTTGCTGCTTCCATCAATCGGAAG
CTTATTGATGCTCCACGACTAGCTCAAGCAATATTTTACGACTACTACAACTTCTACCTT
CCAAAAATGGGAACTAGCCTGGAAAGCATTTGCTATGAGAAGGAGTTCACAACTAAGGAA
AAGGTCGGGATGTATGAGAGAGATGCTGTGTCGAACCTGTTTCCTCCCCCTACTGCTAAT
CAGTCTTGGAGGAAAGTTTTGAGCATGGGAAATCTTCTGAACGGCCATGAACCGATGCAA
AGGGAAATCATATTCTCAGTCCAGGAGAGAATAAGCAACGGTCATTATTCGAGCCCAACC
CCATTATGTACCAACAATGAGAAGATCCAGACACATAGGATGTATATATCTGGGACATCT
AATGACCTTTGGGTTGCATTGTCTGTAACGTCCTGGGATTGAGCTGCACGATGTATGAGA
GGAGCAATTGGTGTTTTAATTAGC