Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d047699_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:9:139511447:139519492:1 gene:Zm00001d047699 gene_biotype:protein_coding transcript_biotype:protein_coding description:U2 small nuclear ribonucleoprotein B''
Sequence

ATGCTGTCCGCCGACATCCCCCCAAACCAGACCATCTACCTCAACAACCTCAACGAGAAG
GTCAAGAAAGAAGAGTTGAAGAGATCGCTTTATGCCCTGTGCTCGCAGTATGGAAGGATA
CTGGATGTGGTGGCTCTGAAAACACAGAAACTGAGAGGGCAGGCATGGGTGGTGTTTAGC
GAGATTACAGCTGCTACCAATGCTTTCCGTGGATTGCAAGACTTTGATTTCTACGGCAAA
AAAATGCGAGTACAATATGCAAAAACAAAATCAGACTGTATTGCAAAAGAAGATGGTACT
TATGCACCTAAGGAGAAAAGGAAGAAGCAAGAGGAGAAAGCTGCTGAGAAAAAACGACGA
GCAGAAGAGGCACAGCAAGCTGGCCCCAATGCTGCTGCTGCTCAAAGCAATGGAACTGGC
TATCAAGCGTCTCGTCTGGGCAAGGCTTCGCAGGAGCCACCTGCTCCTCCGAACAACATC
CTCTTCATCCAGAACTTGCCAGACCAGACCACGAGCATGATGCTCCAGATCCTGTTCCAG
CAGTATCCCGGCTTCCGGGAAGTCCGGATGATCGAAGCCAAACCAGGCATTGCCTTTGTG
GAGTTCGAGGACGACGGCCAGTCCATGGTGGCGATGCAGGCTCTCCAGGGCTTCAAGATC
ACCCCGGAGAACCCCATGGCTATATCCTATGCCAAAAAATGA

Peptide Sequence

PEP ID

Zm00001d047699_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:9:139511447:139519492:1 gene:Zm00001d047699 transcript:Zm00001d047699_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:U2 small nuclear ribonucleoprotein B''
Sequence

MLSADIPPNQTIYLNNLNEKVKKEELKRSLYALCSQYGRILDVVALKTQKLRGQAWVVFS
EITAATNAFRGLQDFDFYGKKMRVQYAKTKSDCIAKEDGTYAPKEKRKKQEEKAAEKKRR
AEEAQQAGPNAAAAQSNGTGYQASRLGKASQEPPAPPNNILFIQNLPDQTTSMMLQILFQ
QYPGFREVRMIEAKPGIAFVEFEDDGQSMVAMQALQGFKITPENPMAISYAKK

Transcript Sequence

Transcript ID

Zm00001d047699_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:139511447:139519492:1 gene:Zm00001d047699 gene_biotype:protein_coding transcript_biotype:protein_coding description:U2 small nuclear ribonucleoprotein B''
Sequence

AGCCCCAAATACACAGCCTAGGCCCACCTATTCGGACACACCAGAAAAGAGAGAGAGAGA
GGAAAAGAACCCAACACGCTCTCTCGCGCGGCAAGAGCTTCCCGGCCCGAAACCGAAAGC
ACCACCACCACCACCACCAATCTCTGCGTTTTTCGTCTGCGGCGGCGGCGGCAGCAGCGG
AGGAGGTAGACGAGATGCTGTCCGCCGACATCCCCCCAAACCAGACCATCTACCTCAACA
ACCTCAACGAGAAGGTCAAGAAAGAAGAGTTGAAGAGATCGCTTTATGCCCTGTGCTCGC
AGTATGGAAGGATACTGGATGTGGTGGCTCTGAAAACACAGAAACTGAGAGGGCAGGCAT
GGGTGGTGTTTAGCGAGATTACAGCTGCTACCAATGCTTTCCGTGGATTGCAAGACTTTG
ATTTCTACGGCAAAAAAATGCGAGTACAATATGCAAAAACAAAATCAGACTGTATTGCAA
AAGAAGATGGTACTTATGCACCTAAGGAGAAAAGGAAGAAGCAAGAGGAGAAAGCTGCTG
AGAAAAAACGACGAGCAGAAGAGGCACAGCAAGCTGGCCCCAATGCTGCTGCTGCTCAAA
GCAATGGAACTGGCTATCAAGCGTCTCGTCTGGGCAAGGCTTCGCAGGAGCCACCTGCTC
CTCCGAACAACATCCTCTTCATCCAGAACTTGCCAGACCAGACCACGAGCATGATGCTCC
AGATCCTGTTCCAGCAGTATCCCGGCTTCCGGGAAGTCCGGATGATCGAAGCCAAACCAG
GCATTGCCTTTGTGGAGTTCGAGGACGACGGCCAGTCCATGGTGGCGATGCAGGCTCTCC
AGGGCTTCAAGATCACCCCGGAGAACCCCATGGCTATATCCTATGCCAAAAAATGAGAAC
CCTCGCGGAATCCCTGTACCCAATACCCATAATATTTTCCGTTCCGCCTTCCGGAATCGA
GCCACAGTATCTAGTCTACTTTCCGGCCATGTATTTTTGGAAAGCACTTGCTTAATTTAG
AAGTTAGACTCTTGCCACTTTTAAACCGTGTTTGGTGCTCAGTCTTTATGTTGAGCCTGC
TTTTGCTCTTGTC