Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d047676_T005
CDS Infomation	cds chromosome:B73_RefGen_v4:9:139046972:139049297:-1 gene:Zm00001d047676 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHD-transcription factor 36 description:RING/U-box protein
Sequence	ATGGGCACTGGAGAGGGGTCGCCGCCGGCGAGGCGGGGCATCAGCGGTAGGCGCCGTCGA TGGCCGGACGAGGACGACGACGAGTATGTGCTGGAGGAGGAAGAAGAAGAGGATTATGTG GAGGAGCTCTCCGCCTCGAGCGCCGGCGAGGAGGGGGTGGATTCAGACGCCGAGTACCAG GAGGCAGAGGAGGAGGACGAGATCGAGAAGCCGCGCCCAAAGCGACCAGCGAAGGGCATC ACATCGAGCGCCGGCGAGAGGGGATTGGATTCAGACGCCGAATACCAGGAGGCAGAGGAG GACGACGAGATCGAGCCGCCGCGCCTGAAGCGACCGGCCAAGGGCAGCACATCGAGCGCG GGTGAGGAGGGGTTGGATTCAGACGCCGAATACCAGGAGGCAGAGGAGGACGAGATGGAG ACGCCGCGCCCAAAGCGACCGGCGAAGGACAGCACATCGAGCGCCGGCGAGGATGGGTTG GATTCAGACGCCGAATACCAGGAGGCAGAGGAGGAGGACGACGACGAAATCGAGACGCCG CGCCCGAAGCGACGGGCAAAGGGCAGCAACAGAGTACGGAAAGGAAAGGTGGATCTGGCC GCCGCACGATCTCGACGCCGGAAGTATGAGGAGGACGAGGACTACGAGGAGGAGGTTGAC GAAGACGACGAGGTGGAGGAGGAGTACCATGATGACCTTGAGGAGGTCGAGGAGGAGGAA GAAGTGGCACCACAGCGGCCGAAGAGCATTGTGAAATGCGGTGCCCGTGGCCGGAATGTG AAGCTGTCTCTGGCAGCGAAGCGATCTCATCAGCGGAAGCAGGAGGATGATGAGGATATG GATTTTGACCCAGAGTTGGATGACGAGGAGGTCGAGATAGATGAGGATATTGATTTTGAT CCCGATGTCGATGGTGACGAGGAGGATGAGTATCAAGACGAGGAGGAAGAGGAACTGGTT CCTGCCCGTGCCAGAAAGGTAACTGTAAAGAATCCGGTGAAGCGAAAGTCCATTTCAAAG AGGCGAACACCAAAGAAGAAGAAGAAAAATAGGGGATCTAAGGTTTCTAGGCGGAAGGGG GCTTCAGCTAAAGTGAAGAAATCAGCACCTGTTAGGAGGCGGAGAAAGCGTTCAGTGATA GATGATTACGAGGATGAGGATGTGGATGATGACGATGACGACGACTTCATTGTCGACGAT GAGGTCATTGTGAATCGGCACCCCAAGAAGAAGGCCAGGATAGGGAGTGGGAGGGAGACA GTGGTGGACCCTCAAGTATCTATTGAGGAAGAGACATGGCCAGACCTTGAGTCAGACTCA TCGGACTTTGAGTTTGCGACGTCCGATGAAGAACCTAACAATGTTGAAACACCTGTAGCT GAGCAGACTACAGTCAGAAAAGGGAGGAAGAAGAGGATATCTGAGTCAGAGTCATCCTCA GATTCTGAATTTGTTGTATCAGGTAAGGAATTGGAAGAATTGAGGGAGCCTGAGCCTCCA AAGGCTGCACCAAATCTGCATGTGTCCTTGAGAAGGATTTGTATTACAAGGCATGGAGAA GGCAAGGGAAAGGAGAAACAGGAACAGGAGGAGGCTGGGAAGCCAATATGCGGGATCTGT CTCTCGGAGGAGCTGAGAGCTACTGTACAAGGTGTCCTCAATTGTTGCTCACACTATTTT TGCTTCGCATGCATCATGGAATGGTCTAGGGTTGAGTCGAGATGCCCATTGTGCAAGCAG CGGTTCACTACAATCACCAAGTCATCAAAGGTAGATCTTGGTCTTGGAGTGAGAAAAGCT GTAGTCAAGGTCGAAGAGCGTGATCAGGTAAAGTTTGGTGTTGTCGTGGTGGTTACATAC TTTCTTCCCTCATTGTCTTTTGGGGTTAGAGACTTCATTTTTAATAAGAGTATAATCCAT TTATATTGT

Peptide Sequence

PEP ID	Zm00001d047676_P005
PEP Infomation	pep chromosome:B73_RefGen_v4:9:139046972:139049297:-1 gene:Zm00001d047676 transcript:Zm00001d047676_T005 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHD-transcription factor 36 description:RING/U-box protein
Sequence	MGTGEGSPPARRGISGRRRRWPDEDDDEYVLEEEEEEDYVEELSASSAGEEGVDSDAEYQ EAEEEDEIEKPRPKRPAKGITSSAGERGLDSDAEYQEAEEDDEIEPPRLKRPAKGSTSSA GEEGLDSDAEYQEAEEDEMETPRPKRPAKDSTSSAGEDGLDSDAEYQEAEEEDDDEIETP RPKRRAKGSNRVRKGKVDLAAARSRRRKYEEDEDYEEEVDEDDEVEEEYHDDLEEVEEEE EVAPQRPKSIVKCGARGRNVKLSLAAKRSHQRKQEDDEDMDFDPELDDEEVEIDEDIDFD PDVDGDEEDEYQDEEEEELVPARARKVTVKNPVKRKSISKRRTPKKKKKNRGSKVSRRKG ASAKVKKSAPVRRRRKRSVIDDYEDEDVDDDDDDDFIVDDEVIVNRHPKKKARIGSGRET VVDPQVSIEEETWPDLESDSSDFEFATSDEEPNNVETPVAEQTTVRKGRKKRISESESSS DSEFVVSGKELEELREPEPPKAAPNLHVSLRRICITRHGEGKGKEKQEQEEAGKPICGIC LSEELRATVQGVLNCCSHYFCFACIMEWSRVESRCPLCKQRFTTITKSSKVDLGLGVRKA VVKVEERDQVKFGVVVVVTYFLPSLSFGVRDFIFNKSIIHLYC

Transcript Sequence

Transcript ID	Zm00001d047676_T005
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:139046972:139049297:-1 gene:Zm00001d047676 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHD-transcription factor 36 description:RING/U-box protein
Sequence	GCGACGATGCTTCCCCACAACTCGAGCCCCTCGTAGCTTCCACCCGGCCCCCATCCGCGG CCTCCCTCCTCCGTTCCCCTTTCCCGTTTTCCTCCTCCGCTTCCCGATTCAACTCGCAAC GCCGCCGCCTTCGCTGACCCATGAGCGGGCGCGAGCCGATTTAGGCCCGCCGCTACAGAG ATTTCGAGAGAATTTTTGGGCTAGCGGGGTGTGAACAGAAACTTGGTGCCCCGCTGCTCT GCCTTTTGTCGTCCACTGTTTCGCGTCAATTCTCGCGCGAAAAGGGATGGGCACTGGAGA GGGGTCGCCGCCGGCGAGGCGGGGCATCAGCGGTAGGCGCCGTCGATGGCCGGACGAGGA CGACGACGAGTATGTGCTGGAGGAGGAAGAAGAAGAGGATTATGTGGAGGAGCTCTCCGC CTCGAGCGCCGGCGAGGAGGGGGTGGATTCAGACGCCGAGTACCAGGAGGCAGAGGAGGA GGACGAGATCGAGAAGCCGCGCCCAAAGCGACCAGCGAAGGGCATCACATCGAGCGCCGG CGAGAGGGGATTGGATTCAGACGCCGAATACCAGGAGGCAGAGGAGGACGACGAGATCGA GCCGCCGCGCCTGAAGCGACCGGCCAAGGGCAGCACATCGAGCGCGGGTGAGGAGGGGTT GGATTCAGACGCCGAATACCAGGAGGCAGAGGAGGACGAGATGGAGACGCCGCGCCCAAA GCGACCGGCGAAGGACAGCACATCGAGCGCCGGCGAGGATGGGTTGGATTCAGACGCCGA ATACCAGGAGGCAGAGGAGGAGGACGACGACGAAATCGAGACGCCGCGCCCGAAGCGACG GGCAAAGGGCAGCAACAGAGTACGGAAAGGAAAGGTGGATCTGGCCGCCGCACGATCTCG ACGCCGGAAGTATGAGGAGGACGAGGACTACGAGGAGGAGGTTGACGAAGACGACGAGGT GGAGGAGGAGTACCATGATGACCTTGAGGAGGTCGAGGAGGAGGAAGAAGTGGCACCACA GCGGCCGAAGAGCATTGTGAAATGCGGTGCCCGTGGCCGGAATGTGAAGCTGTCTCTGGC AGCGAAGCGATCTCATCAGCGGAAGCAGGAGGATGATGAGGATATGGATTTTGACCCAGA GTTGGATGACGAGGAGGTCGAGATAGATGAGGATATTGATTTTGATCCCGATGTCGATGG TGACGAGGAGGATGAGTATCAAGACGAGGAGGAAGAGGAACTGGTTCCTGCCCGTGCCAG AAAGGTAACTGTAAAGAATCCGGTGAAGCGAAAGTCCATTTCAAAGAGGCGAACACCAAA GAAGAAGAAGAAAAATAGGGGATCTAAGGTTTCTAGGCGGAAGGGGGCTTCAGCTAAAGT GAAGAAATCAGCACCTGTTAGGAGGCGGAGAAAGCGTTCAGTGATAGATGATTACGAGGA TGAGGATGTGGATGATGACGATGACGACGACTTCATTGTCGACGATGAGGTCATTGTGAA TCGGCACCCCAAGAAGAAGGCCAGGATAGGGAGTGGGAGGGAGACAGTGGTGGACCCTCA AGTATCTATTGAGGAAGAGACATGGCCAGACCTTGAGTCAGACTCATCGGACTTTGAGTT TGCGACGTCCGATGAAGAACCTAACAATGTTGAAACACCTGTAGCTGAGCAGACTACAGT CAGAAAAGGGAGGAAGAAGAGGATATCTGAGTCAGAGTCATCCTCAGATTCTGAATTTGT TGTATCAGGTAAGGAATTGGAAGAATTGAGGGAGCCTGAGCCTCCAAAGGCTGCACCAAA TCTGCATGTGTCCTTGAGAAGGATTTGTATTACAAGGCATGGAGAAGGCAAGGGAAAGGA GAAACAGGAACAGGAGGAGGCTGGGAAGCCAATATGCGGGATCTGTCTCTCGGAGGAGCT GAGAGCTACTGTACAAGGTGTCCTCAATTGTTGCTCACACTATTTTTGCTTCGCATGCAT CATGGAATGGTCTAGGGTTGAGTCGAGATGCCCATTGTGCAAGCAGCGGTTCACTACAAT CACCAAGTCATCAAAGGTAGATCTTGGTCTTGGAGTGAGAAAAGCTGTAGTCAAGGTCGA AGAGCGTGATCAGGTAAAGTTTGGTGTTGTCGTGGTGGTTACATACTTTCTTCCCTCATT GTCTTTTGGGGTTAGAGACTTCATTTTTAATAAGAGTATAATCCATTTATATTGT