Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d047640_T004
CDS Infomation

cds chromosome:B73_RefGen_v4:9:137872918:137874612:1 gene:Zm00001d047640 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:thiaminase3 description: thiaminase3
Sequence

ATGCAGAGCCAGGACTATCTGTTTGTAAGGGAATTTGTTGCATTCATAGCAAGTGTACTG
CTCAAATGCTGCAAGCAAGAAGACAGCTCGGACATGGAAATCATCCTGGGTGGAGTAGCG
TCTATCAGCGACGAGATCTCTTGGTTCAAGAACGAAGCTACTGTATGGGGCGTCGATCTA
GCAAGTGTTTCCCCCTTAAAAGCCAATCTAGAGTACCACAGGTTTCTCCGGAGCTTTACT
GAGCCAGAGATTAGCTATGCTGTTGCTGTAACTACCTTCTGGACGATCGAAACCGTGTAC
CAGGACAGCTTTGGTTTCTGCATACAAGACGGCAACAAGACGCCGCCGGAGCTCCTGGGC
ACCTGCCAGAGATGGGGCAGCGCCGGGTTCAGACAGTACTGCCAGTCTCTGCAGAGCATC
GTGGATCGTTGCTTGGCTAACGCACCGGCTGATGCTGTCCAGAGTGCTGAAGAGGCCTTC
GTCCGGGTACTCGAGCTGGAAATTGGTTTCTGGGATATGAGCTCTTCTCGGTCCTAA

Peptide Sequence

PEP ID

Zm00001d047640_P004
PEP Infomation

pep chromosome:B73_RefGen_v4:9:137872918:137874612:1 gene:Zm00001d047640 transcript:Zm00001d047640_T004 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:thiaminase3 description: thiaminase3
Sequence

MQSQDYLFVREFVAFIASVLLKCCKQEDSSDMEIILGGVASISDEISWFKNEATVWGVDL
ASVSPLKANLEYHRFLRSFTEPEISYAVAVTTFWTIETVYQDSFGFCIQDGNKTPPELLG
TCQRWGSAGFRQYCQSLQSIVDRCLANAPADAVQSAEEAFVRVLELEIGFWDMSSSRS

Transcript Sequence

Transcript ID

Zm00001d047640_T004
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:137872918:137874612:1 gene:Zm00001d047640 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:thiaminase3 description: thiaminase3
Sequence

GTGGTCAATGGTCGTCGCTTCATTGGTCAAACCTTGAGAGCCCCGGTTCAGCAATCGCAG
TTCCACAAGGCGGCGATGGACGGCGGCGGGGTCGATACGGCCACGACGGCGGCCTGGATG
GAGAAGCACCGGCACATGTACGAGCGGGCCACCCGGCACCCGTTCACCGTCTCCATCCGC
GACGGTACCGTCGACATGTCTGCCTTCAAGCGCTGGCTGAAAATTGAAGTGGCTAAGCTT
TGACCTTTTCATGTCTGATTCTTGGTTCGTGGTGTCGGGCATCGAGATCTGTACATCAAT
CTAAATACTACCAAGAAGTCTTGGAGTTGCTACCAAGTTAACAAAAATTAGTGTGCACGG
CTATGAAATTGAGTGACTAGTTGCGTGATTCGAGTCAGAGGTGTTTCTGGGAGAACTGTG
AATTTAAAATTGAACCTGAAAGCGTGAAGGCAAACGATCTTTATCGGCATATACTGATAC
TGCGTCTGTGAAGATCTTGTGTTTCCAGTGGACTAGTCACTCTGAATGTTGTTATTCTGC
TGTTGCTTCCTGTTGACAAAAATAACTCCAGAATAGAATTGGCTCTTAGTTGACACTGTC
CAATTATGATAGTATAAAGTGATGAAGGATCTTGTTCAGAGAACTGTGCAAAAAAGAACT
CAACTGAGTCAACTCCTAGTTGAGCATAGTATTCTGTAATTTTTTTTTAAAAGTTACTCT
ATATGATCTTGGGTTCTTTTTCTAGTTGAAAGCATTTTGGTTGGTCATAATTACAGCTGT
CTACACAATGATCAATATGTGCTGGCTAATTTTCTTTCCGTGATTTTCTTAAATAAATTT
CATTTTGGTTATGAGTACCATGAGGGGAGAAAAAAAATAAACAGACTGGTTTCTTCGTCA
TATGCAGAGCCAGGACTATCTGTTTGTAAGGGAATTTGTTGCATTCATAGCAAGTGTACT
GCTCAAATGCTGCAAGCAAGAAGACAGCTCGGACATGGAAATCATCCTGGGTGGAGTAGC
GTCTATCAGCGACGAGATCTCTTGGTTCAAGAACGAAGCTACTGTATGGGGCGTCGATCT
AGCAAGTGTTTCCCCCTTAAAAGCCAATCTAGAGTACCACAGGTTTCTCCGGAGCTTTAC
TGAGCCAGAGATTAGCTATGCTGTTGCTGTAACTACCTTCTGGACGATCGAAACCGTGTA
CCAGGACAGCTTTGGTTTCTGCATACAAGACGGCAACAAGACGCCGCCGGAGCTCCTGGG
CACCTGCCAGAGATGGGGCAGCGCCGGGTTCAGACAGTACTGCCAGTCTCTGCAGAGCAT
CGTGGATCGTTGCTTGGCTAACGCACCGGCTGATGCTGTCCAGAGTGCTGAAGAGGCCTT
CGTCCGGGTACTCGAGCTGGAAATTGGTTTCTGGGATATGAGCTCTTCTCGGTCCTAATT
ACCAGCGTGTTCTCTGAGTCCAAACATCTACGCAAATAATCGAACGAAATAAATGGTGCT
TCGGGCTCAGACCCAGGTTTTCCC