Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d047608_T004
CDS Infomation

cds chromosome:B73_RefGen_v4:9:136965576:136979812:-1 gene:Zm00001d047608 gene_biotype:protein_coding transcript_biotype:protein_coding description:Betaine aldehyde dehydrogenase 2 mitochondrial
Sequence

ATGGCTACATGGAAGGTAGCCCCTGCATTGGCTGCTGGTTGTACAGCTGTGCTGAAGCCA
TCTGAACTGGCTTCTGTGACTTGCTTAGAGCTTGCTGATATCTGTAAAGAAGTCGGTCTC
CCTTCTGGTGTCTTGAACATTGTGACAGGATTAGGTCCTGATGCTGGCGCTCCTTTGTCA
GCACACCCAGATGTTGACAAGGTCACTTTTACTGGGAGTTTTGAAACTGGCAAGAAAATT
ATGGCATCGACAGCTCCTATGGTCAAGCCTGTTACACTGGAACTTGGTGGAAAAAGTCCT
ATAGTAGTATTTGATGATGTTGACATTGACAAAGCCGGGTCGTGCGGGGTACGGCTCCTT
GGCCGCGTCCTTCAACGGCGGCCTGCTCGCCGCAGCCAGCCCCGAGCTGTACAGGGGCGC
CGTCGGCTGCGGCGCCTGCTTCCAGGTGCGGTGCAGGGACAGCGAGCTGTGCATGTGACG
GACCAGGCGCGGACGTCAAACCGCACGACCCTGGTGCTGAGCGCCGCGGCGTACGCGGCC
ATGGCCAGCGCCGGCAAGGCCGCACGCCTCAGGGACCGGCGCGTTGTCGATGTCGAGTAC
AAGAGGGTACCTTGCGGGTACATGAAGGACCGCAACCTATCGATACGCGTGGAGGAGAAG
AGCCGGCCGCCAAGCAACCTATCCATCAGGTTCCTGTACCAGGGCGGCCAGACCGACACC
GTCGCCGTCGACATCGCCACTGTGGGGTCGTCCAACTGGCGGTTCATGGCGCGGGACCAT
GGGCCGGCGTGGAGCACGACGCAGGCGCCGCCGGGGCCGCTGCAGTTCCGGCTGGTGGTG
ACAGGTTGCTATGACGGCAAGTGGGTGTGGGCGGAGTTGGAGGTGCTGCCGCGCCGGTGG
GAGGCCGGCCGCGTCTACGACGCCGGGGTGCAGGTCTCCGACGTCTCGCGGGAAGGGTGC
TACCTCTGCGACACGCACAAGTGGCAGTGA

Peptide Sequence

PEP ID

Zm00001d047608_P004
PEP Infomation

pep chromosome:B73_RefGen_v4:9:136965576:136979812:-1 gene:Zm00001d047608 transcript:Zm00001d047608_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:Betaine aldehyde dehydrogenase 2 mitochondrial
Sequence

MATWKVAPALAAGCTAVLKPSELASVTCLELADICKEVGLPSGVLNIVTGLGPDAGAPLS
AHPDVDKVTFTGSFETGKKIMASTAPMVKPVTLELGGKSPIVVFDDVDIDKAGSCGVRLL
GRVLQRRPARRSQPRAVQGRRRLRRLLPGAVQGQRAVHVTDQARTSNRTTLVLSAAAYAA
MASAGKAARLRDRRVVDVEYKRVPCGYMKDRNLSIRVEEKSRPPSNLSIRFLYQGGQTDT
VAVDIATVGSSNWRFMARDHGPAWSTTQAPPGPLQFRLVVTGCYDGKWVWAELEVLPRRW
EAGRVYDAGVQVSDVSREGCYLCDTHKWQ

Transcript Sequence

Transcript ID

Zm00001d047608_T004
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:136965576:136979812:-1 gene:Zm00001d047608 gene_biotype:protein_coding transcript_biotype:protein_coding description:Betaine aldehyde dehydrogenase 2 mitochondrial
Sequence

AACTATCCTCTACTGATGGCTACATGGAAGGTAGCCCCTGCATTGGCTGCTGGTTGTACA
GCTGTGCTGAAGCCATCTGAACTGGCTTCTGTGACTTGCTTAGAGCTTGCTGATATCTGT
AAAGAAGTCGGTCTCCCTTCTGGTGTCTTGAACATTGTGACAGGATTAGGTCCTGATGCT
GGCGCTCCTTTGTCAGCACACCCAGATGTTGACAAGGTCACTTTTACTGGGAGTTTTGAA
ACTGGCAAGAAAATTATGGCATCGACAGCTCCTATGGTCAAGCCTGTTACACTGGAACTT
GGTGGAAAAAGTCCTATAGTAGTATTTGATGATGTTGACATTGACAAAGCCGGGTCGTGC
GGGGTACGGCTCCTTGGCCGCGTCCTTCAACGGCGGCCTGCTCGCCGCAGCCAGCCCCGA
GCTGTACAGGGGCGCCGTCGGCTGCGGCGCCTGCTTCCAGGTGCGGTGCAGGGACAGCGA
GCTGTGCATGTGACGGACCAGGCGCGGACGTCAAACCGCACGACCCTGGTGCTGAGCGCC
GCGGCGTACGCGGCCATGGCCAGCGCCGGCAAGGCCGCACGCCTCAGGGACCGGCGCGTT
GTCGATGTCGAGTACAAGAGGGTACCTTGCGGGTACATGAAGGACCGCAACCTATCGATA
CGCGTGGAGGAGAAGAGCCGGCCGCCAAGCAACCTATCCATCAGGTTCCTGTACCAGGGC
GGCCAGACCGACACCGTCGCCGTCGACATCGCCACTGTGGGGTCGTCCAACTGGCGGTTC
ATGGCGCGGGACCATGGGCCGGCGTGGAGCACGACGCAGGCGCCGCCGGGGCCGCTGCAG
TTCCGGCTGGTGGTGACAGGTTGCTATGACGGCAAGTGGGTGTGGGCGGAGTTGGAGGTG
CTGCCGCGCCGGTGGGAGGCCGGCCGCGTCTACGACGCCGGGGTGCAGGTCTCCGACGTC
TCGCGGGAAGGGTGCTACCTCTGCGACACGCACAAGTGGCAGTGACGCGCGCACGAGCTG
GATTGTACAGTTTTTTGTTTTGGTCGGGAATGGGACGAAAGATATGAAATGATGATGAGC
GGAGCCGGAGAGCCGAATCAAATCTATTAATCGGTGGCGCTGGAAGGGTGCTGCCGTCGA
TTCCTCTACCGGTGGCACTGGAACACAAGTAACCGGCAGTTGCCGACCATTACCAAGATC
TCTAAAGGGCTTAGATTAATTAGATAATCCAGCATAAGCACAAAACGTTAATCTCAAATC
TATTAGCAGATATAATATTGTTTGTGTGACATTGTACTGTTTTGTTTCTTAAACAAACGT
CATTCTACAAATTTTGCATCTGTCCCTGTAGGGCGCCCGTAAGGGCGCCGCCTGTTCTAG
TATGACTAATGGTCGATCCCGTAGTAAAAAGCTGTCTCCAATCCCAGGCTACCTGAACCT
ACGAAGAGCCGACTCAACCGCTAGTACAGTCCACACATGACACAACGACACCAACTGTCC
TCAATCCAGCAGCCCTCGAGTCTCGTCCCCGCACATCAGCAGAGAGACGCCACTACCACC
ACCGCAAGCGACGACGGGGAGATGTTTCTGCGACGGATCCTGACCGGCGGAGGTGGCCTG
GCGGCGCTGAGGGCGGCGCGCGCCGTGAAGGAGACGACGGGGATCGTCGGCCTTGAGGTG
GCGCCCAACGCGCGGGAGGTTCTCATCGGGCTCTACACGCGTACGCTCAAGGAGATCGAG
GCCGTCCCCAAAGACGAGGGCTACCGCAAGGCCGTTGAGTCCTTCACCAATCACCGCCTC
CAGATCTGCCAGGAGGAGGACGACTGGAAGCGCATCGAGGACCGAATCGGATGCGGGCAA
GTCGAGGAGCTCATCGAGGAGGCCGAGGACGAGCTCAAGCTCATCGCCAAAATGATTGAA
TGGGATCCGTGGGGTGTCCCTGATGACTACGAATGTGAGGTGATTGAAGACGACACCCCA
ATTCCTAAGCATGTTCCTCAGCACCGGCCCGTTGCTCTTCCTGAGGAGTTCTTCAAGACA
CTAGATGCCGTCAAATCAGATCCCGCCCTCCAAGGCGATGCTCCTCCTCAAGTGAAGGCG
TAAAGATGAGTCTTCCCGGTTATGTCTTATGTCATTTCACACTTTGCTGCGCTGGGTAGG
GACTAGTTTCTTGTGCCATTTGCCAGCAATGTGCTTGTTCCGAGCAGAATAAATTTCTGG
CGAGTACCATCGAAGAGTGACTTTGAACGAAGTGATTCGACACAGTAAATTTGTTGTTGT
CCATGAATACTTGCTCTGAACATCGCTTGCCGATGAAATATTGAATGCTAGGTAGAGTTC