Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d047601_T017
CDS Infomation	cds chromosome:B73_RefGen_v4:9:136758665:136761891:-1 gene:Zm00001d047601 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pre-mRNA-splicing factor ATP-dependent RNA helicase%3B Putative RNA helicase family protein
Sequence	ATGGTTGCCTGCACTCAGCCTCGGAGGGTCGCGGCAATGTCAGTCTCCAGGCGTGTGGCA GAGGAGATGGATGTTACTATTGGGGAAGAAGTGGGTTACAGTATTCGGTTTGAAGATTGC AGCAGCCACAAAACTGTTCTCAAATATTTGACAGATGGTATGCTTCTGAGAGAAGCAATG GCAGACCCACTTTTAGAGAAGTACAAGGTGATTGTTCTTGATGAGGCTCATGAGAGGACT TTGGCAACAGATGTTTTGTTTGGGCTTCTGAAGGAGGTTCTAAAAAATAGACCGGATTTG AAGCTTGTTGTTATGAGTGCTACTCTCGAAGCAGAGAAATTCCAGGGTTACTTTAGTGAT GCACCGTTGATGAAGGTGCCTGGGAGACTTCATCCAGTTGAGATATTTTACACCCAAGAA CCAGAGAGGGACTATCTAGAGGCTGCTATCAGGACAGTTGTGCAAATACATATGTGTGAA CCTGCTGGTGATATCCTTGTATTCCTTACTGGAGAAGAGGAGATTGAGGACGCATGTCGG AAAATCAATAAGGAAATCAATAATATGGGAGATCAGGTTGGCCCAGTTAAAGTCGTGCCT TTATACTCTACACTGCCCCCAGCCATGCAGCAGAAGATTTTTGAACCTGCTCCTGCCCCA TTGAAGGAACGAGGTCCTCCTGGAAGGAAAATTGTTGTGTCCACCAACATTGCTGAAACA TCCTTAACTATAGATGGCATAGTTTATGTGATAGACCCGGGGTTTTCTAAACAGAAAGTT TACAACCCAAGAATAAGGGTGGAATCCCTCCTGGTGTCACCAATTTCTAAGGCAAGTGCT CATCAGAGAGCTGGTCGTGCTGGACGAACGCAACCTGGGAAGTGCTTTAGGCTATACACA GAGAAGAGCTTTAATGAGGATTTGCAACCACAGACATACCCAGAAATTCTTCGGTCGAAC CTGGCAAATACAGTTCTTACCTTGAAGAAACTTGGAATTGATGATTTAGTGCATTTTGAC TTTATGGATCCTCCAGCACCAGAAACTCTAATGAGGGCCTTAGAAGTTTTGAACTATTTG GCTGCACTAGATGATGAAGGTAATCTAACACAGTTAGGTGAGATGATGAGTGAGTTTCCC CTGGATCCACAAATGTCAAAGATGCTTGTCATCAGTCCAAAGTACAACTGTTCGAATGAG ATCTTATCAATATCTGCCATGCTGTCAGCACCCAATTGCTTCCTCCGGCCTAGGGAAGCT CAAAAGGCTGCTGATGAGGCCAAGGCTCGATTTGGCCATATTGATGGGGACCATCTGACG CTTCTGAATGTATACCATGCATACAAGCAAAACAATGAAGATCCCCAGTGGTGTTATGAG AACTTTATCAATTCCAGAGCACTCAAGTCTGCAGACAATGTCAGACAACAGCTTGTTCGC ATCATGACTAGATTCAACCTCAAGATGTGCAGCACGGATTTCAATAGCCGTGAGTACTAC GTCAATATCAGGAAAACCCTGCTTGCAGGGTATTTCATGCAGGTCGCTCACCTGGAACGA ACTGGACATTACCTGACTGTAAAAGATAACCAGGTCGTCCATCTTCATCCCTCCAATTGC ATGGACCATAAGCCAGAGTGGGTCATCTACAATGAATACGTCTTGACTACCAGGAATTTC ATCCGCACAGTCACCGATATCCGTGGGGAATGGCTAATTGATATTGCGCCGCATTACTAT GACCTGAGCAATTTCCCGTCATGTGAGGCCAAGCGTGTTCTTGAGAGGCTGTATAACAAG CGGGAGAGGGAAAGAGCTGCAAATAGAGGCTGA

Peptide Sequence

PEP ID	Zm00001d047601_P017
PEP Infomation	pep chromosome:B73_RefGen_v4:9:136758665:136761891:-1 gene:Zm00001d047601 transcript:Zm00001d047601_T017 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pre-mRNA-splicing factor ATP-dependent RNA helicase%3B Putative RNA helicase family protein
Sequence	MVACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSHKTVLKYLTDGMLLREAM ADPLLEKYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFSD APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPAGDILVFLTGEEEIEDACR KINKEINNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPAPLKERGPPGRKIVVSTNIAET SLTIDGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQRAGRAGRTQPGKCFRLYT EKSFNEDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYL AALDDEGNLTQLGEMMSEFPLDPQMSKMLVISPKYNCSNEILSISAMLSAPNCFLRPREA QKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPQWCYENFINSRALKSADNVRQQLVR IMTRFNLKMCSTDFNSREYYVNIRKTLLAGYFMQVAHLERTGHYLTVKDNQVVHLHPSNC MDHKPEWVIYNEYVLTTRNFIRTVTDIRGEWLIDIAPHYYDLSNFPSCEAKRVLERLYNK RERERAANRG

Transcript Sequence

Transcript ID	Zm00001d047601_T017
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:136758665:136761891:-1 gene:Zm00001d047601 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pre-mRNA-splicing factor ATP-dependent RNA helicase%3B Putative RNA helicase family protein
Sequence	CCATGGTTGCCTGCACTCAGCCTCGGAGGGTCGCGGCAATGTCAGTCTCCAGGCGTGTGG CAGAGGAGATGGATGTTACTATTGGGGAAGAAGTGGGTTACAGTATTCGGTTTGAAGATT GCAGCAGCCACAAAACTGTTCTCAAATATTTGACAGATGGTATGCTTCTGAGAGAAGCAA TGGCAGACCCACTTTTAGAGAAGTACAAGGTGATTGTTCTTGATGAGGCTCATGAGAGGA CTTTGGCAACAGATGTTTTGTTTGGGCTTCTGAAGGAGGTTCTAAAAAATAGACCGGATT TGAAGCTTGTTGTTATGAGTGCTACTCTCGAAGCAGAGAAATTCCAGGGTTACTTTAGTG ATGCACCGTTGATGAAGGTGCCTGGGAGACTTCATCCAGTTGAGATATTTTACACCCAAG AACCAGAGAGGGACTATCTAGAGGCTGCTATCAGGACAGTTGTGCAAATACATATGTGTG AACCTGCTGGTGATATCCTTGTATTCCTTACTGGAGAAGAGGAGATTGAGGACGCATGTC GGAAAATCAATAAGGAAATCAATAATATGGGAGATCAGGTTGGCCCAGTTAAAGTCGTGC CTTTATACTCTACACTGCCCCCAGCCATGCAGCAGAAGATTTTTGAACCTGCTCCTGCCC CATTGAAGGAACGAGGTCCTCCTGGAAGGAAAATTGTTGTGTCCACCAACATTGCTGAAA CATCCTTAACTATAGATGGCATAGTTTATGTGATAGACCCGGGGTTTTCTAAACAGAAAG TTTACAACCCAAGAATAAGGGTGGAATCCCTCCTGGTGTCACCAATTTCTAAGGCAAGTG CTCATCAGAGAGCTGGTCGTGCTGGACGAACGCAACCTGGGAAGTGCTTTAGGCTATACA CAGAGAAGAGCTTTAATGAGGATTTGCAACCACAGACATACCCAGAAATTCTTCGGTCGA ACCTGGCAAATACAGTTCTTACCTTGAAGAAACTTGGAATTGATGATTTAGTGCATTTTG ACTTTATGGATCCTCCAGCACCAGAAACTCTAATGAGGGCCTTAGAAGTTTTGAACTATT TGGCTGCACTAGATGATGAAGGTAATCTAACACAGTTAGGTGAGATGATGAGTGAGTTTC CCCTGGATCCACAAATGTCAAAGATGCTTGTCATCAGTCCAAAGTACAACTGTTCGAATG AGATCTTATCAATATCTGCCATGCTGTCAGCACCCAATTGCTTCCTCCGGCCTAGGGAAG CTCAAAAGGCTGCTGATGAGGCCAAGGCTCGATTTGGCCATATTGATGGGGACCATCTGA CGCTTCTGAATGTATACCATGCATACAAGCAAAACAATGAAGATCCCCAGTGGTGTTATG AGAACTTTATCAATTCCAGAGCACTCAAGTCTGCAGACAATGTCAGACAACAGCTTGTTC GCATCATGACTAGATTCAACCTCAAGATGTGCAGCACGGATTTCAATAGCCGTGAGTACT ACGTCAATATCAGGAAAACCCTGCTTGCAGGGTATTTCATGCAGGTCGCTCACCTGGAAC GAACTGGACATTACCTGACTGTAAAAGATAACCAGGTCGTCCATCTTCATCCCTCCAATT GCATGGACCATAAGCCAGAGTGGGTCATCTACAATGAATACGTCTTGACTACCAGGAATT TCATCCGCACAGTCACCGATATCCGTGGGGAATGGCTAATTGATATTGCGCCGCATTACT ATGACCTGAGCAATTTCCCGTCATGTGAGGCCAAGCGTGTTCTTGAGAGGCTGTATAACA AGCGGGAGAGGGAAAGAGCTGCAAATAGAGGCTGAAGTTGATACTTCCACAAACCTGGTG CTTCATAATTCCACAGCAGGTTATCACAGATGGCGGACCCGTTTGTCATATGCATGATGT CTTCCACAGCCTGTTGCCTAGTGTTTCATCAGCATGATCATTATGCAGACAGCCTCGAGA AATCCCTTGGCAGCTCAATTAGTTATGATGCAGATTAATTTTGTGCCATTCTCCTTATTT TTGTATGCGTAAGATATTTATATTTTGCGTTTCTATGTGATTAACTGGTTAT