Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d047594_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:9:136613133:136620155:1 gene:Zm00001d047594 gene_biotype:protein_coding transcript_biotype:protein_coding description:SNF1 protein kinase regulatory subunit beta-1

Sequence

ATGGGAAACGCCAGCGGCCGCGACGAGGACGCCGCGGCTGTTGACGGCGACGGCGCCGAC
GTGGAGGACGGCGGAGGGGACTCGTCGGAGCGCGACTTCCCATCGTACGGTAGCGGAGGA
GCCAACCACGTGCGGCGCGCGTGCTCAGTGGGCGTCGTAGGGGGCGGCGCCGCCGCCGGA
TCGCCACCCGGGAGCCCCGGTCACTCGCTCTCGCCGCGGATGTTCGTGCCCCAGATATTG
ATGGATGAACAAGAAGAATACGATGGCCCCCCTCAAAAAGAAATTCCTGCTTTAATTGTC
TGGACCCTTGGAGGAAAGAATGTATATGTTGAAGGATCATGGGATAACTGGAAATCAAGA
AAAGCCATGCAAAAATCTGGGAAAGATCATTCTCTTTTGCTGGTACTCCCAGCAGGAGTT
TACCGATACAGATTTGTTGTAGATGGAGAAAGGAGATGTCTTCCTGATCTCCCCTGTGAA
ATCGATGCAATGGGCAATGCGGTTAACCTTCTTGATGTTAATGATTATGTCCCTGAAAGT
GTTGAGAGCGTGGCAGAGTTTGAGCCACCTCCTTCTCCAGACTCTAGCTACAGTTTCCAG
GCACCTGAGGACAAGGACTTCGCCAAGGAGCCTCCTGTTCTTCCATCTCAACTCCATCTC
GGTGTTCTTAACTCACAGAACTCGGAAGAAAGCTGTGCGCGGCCGCAGCACATAGTCCTC
AATCACCTCTTCATAGAGAAGGGCTGGGGCGCCCACCCTCTGGTGTCTCTCGGCCTAACC
CACAGGTTCGAGTCCAAATATGTAACAGTCGTCCTGTACAAACCCATCGAACGATAG

Peptide Sequence

PEP ID

Zm00001d047594_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:9:136613133:136620155:1 gene:Zm00001d047594 transcript:Zm00001d047594_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:SNF1 protein kinase regulatory subunit beta-1

Sequence

MGNASGRDEDAAAVDGDGADVEDGGGDSSERDFPSYGSGGANHVRRACSVGVVGGGAAAG
SPPGSPGHSLSPRMFVPQILMDEQEEYDGPPQKEIPALIVWTLGGKNVYVEGSWDNWKSR
KAMQKSGKDHSLLLVLPAGVYRYRFVVDGERRCLPDLPCEIDAMGNAVNLLDVNDYVPES
VESVAEFEPPPSPDSSYSFQAPEDKDFAKEPPVLPSQLHLGVLNSQNSEESCARPQHIVL
NHLFIEKGWGAHPLVSLGLTHRFESKYVTVVLYKPIER

Transcript Sequence

Transcript ID

Zm00001d047594_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:136613133:136620155:1 gene:Zm00001d047594 gene_biotype:protein_coding transcript_biotype:protein_coding description:SNF1 protein kinase regulatory subunit beta-1

Sequence

CCCGTCCCTCTCTTCTTCTCCCCCGCCCCCTTTTTCCTAGCGGCACGGCACCAGGCCCGC
CCTGGTGGCATCTTCGTAATTTCGCGCCTCTTCTCCGCCACGGCGGCTGGGGGTGAGAGG
AGGTATGGGAAACGCCAGCGGCCGCGACGAGGACGCCGCGGCTGTTGACGGCGACGGCGC
CGACGTGGAGGACGGCGGAGGGGACTCGTCGGAGCGCGACTTCCCATCGTACGGTAGCGG
AGGAGCCAACCACGTGCGGCGCGCGTGCTCAGTGGGCGTCGTAGGGGGCGGCGCCGCCGC
CGGATCGCCACCCGGGAGCCCCGGTCACTCGCTCTCGCCGCGGATGTTCGTGCCCCAGAT
ATTGATGGATGAACAAGAAGAATACGATGGCCCCCCTCAAAAAGAAATTCCTGCTTTAAT
TGTCTGGACCCTTGGAGGAAAGAATGTATATGTTGAAGGATCATGGGATAACTGGAAATC
AAGAAAAGCCATGCAAAAATCTGGGAAAGATCATTCTCTTTTGCTGGTACTCCCAGCAGG
AGTTTACCGATACAGATTTGTTGTAGATGGAGAAAGGAGATGTCTTCCTGATCTCCCCTG
TGAAATCGATGCAATGGGCAATGCGGTTAACCTTCTTGATGTTAATGATTATGTCCCTGA
AAGTGTTGAGAGCGTGGCAGAGTTTGAGCCACCTCCTTCTCCAGACTCTAGCTACAGTTT
CCAGGCACCTGAGGACAAGGACTTCGCCAAGGAGCCTCCTGTTCTTCCATCTCAACTCCA
TCTCGGTGTTCTTAACTCACAGAACTCGGAAGAAAGCTGTGCGCGGCCGCAGCACATAGT
CCTCAATCACCTCTTCATAGAGAAGGGCTGGGGCGCCCACCCTCTGGTGTCTCTCGGCCT
AACCCACAGGTTCGAGTCCAAATATGTAACAGTCGTCCTGTACAAACCCATCGAACGATA
GCAATAGCCCGCGCCTGAAGAGCGGAAGTTGACAACTCACTGTGGGAGCAGCGATGAACA
GCGCCGAAGTGGTACATGCTTGTAAAAGCGGTTGAGGTCCAGGAGTATTTTTTTCCCGTG
CCCTTAGCTTGCACAACCTGTGGTACTCTGGTGGTTAGCTGTACATGCTGCGCTGTCATG
ATGGTTGGTTTGCTGTTACAGAGAGCCAAGGCGTCCTTGATTCCGAAGTACACGTACGTT
TGTCGTCGTCGTTCCTCCCCCCATCCCATCCCAGGAATGAAATGTTTGTAGGTGTCACTG
AAAACCGTGGAAATCCACAGAAATGCTAGGAGACAGAGATTAGACCATGTGATTCCTAGA
TTTTTGTTTGTTTTTTTTTTGGCTGGTCAAGAACTCAAGACGATGTTGTTGTTATGAAAT
GAACTCAAGAAAAAATACAAGTGGGATGCTGTG