Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d047558_T004
CDS Infomation	cds chromosome:B73_RefGen_v4:9:135453764:135457008:1 gene:Zm00001d047558 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING/U-box superfamily protein
Sequence	ATGGATCCTACTGAGCCTCGTTGGCGCATAAACTCGAGCTTCTCTCCCCCAACATCAAGG AGATGGGACTGTCGTTATTCATCAGATGGATTGCCCCACAGAGTTCATGATGCTCCTCAT GATCACCCACCTTATGTTTCATCATTGTCATCCCATAGCAAAGGAAGCAGAAATGCATTT GGCAGTGATCAGTACCTCAGTCACCATCATTCTGTGTCTGATGGAGCACTTTCTTATTTT GGGAGTCCAGCTGACAGCCTTCAGGCTCCACGCTGGACGCCCTCTCTTCAAAGATTTGAT CTTGGTGAATTCTCTACCCCTGCAGGAGGATCAAGGCCAGAAACTTCTGACTATCCTCAG TCAAGTGAGAGGCCACTGACTGCCACAAGCAGTTTCAGTTCTGCATCCCCATTTTCAGAA TCAAGCCAGTTAGCTTCATCTAGTAAACAACCAGCCCCATATCTACCTCGCAACCATATG GGCAGGCGGTCTTTCATGTCTAAACCAGTCTACCCACTTGTCTTCCGGAATCCTGTCTCA GAATCAGAAGCGTGCAGGATGCTTGAGGTTGGTAATGCCGGGCGAGCGACACCAAGTGAT GACAGCCAAGCTTCTCCTCTGTGGCGTCGCAGCTTGGCGAGCCCAGATCTCAAGTTCCAC AATGCACCGAATGAACTTGGGAAGATGGAAACCTCACCCGAACCGAACACAAGCTCAAGA AGGGAAGGGTTCAGATGGAGCAACGCCAGCAGTTATGACTTTGGATACGATGGAGATGCC ATTGACATTTCAGATCATATCAGCATCGAGTCCCAGAGATCTCCCACGAGCTCAGCGAGG TTCCTGAAGTGTGGGCTGTGCGAGAGATTCCTGCACCAGAAATCACCCTGGACCTCGAAC AGGATTGTTCGAAACGCCGACATGCCAGTGGCAGCAGTTCTGCCTTGCCGACATGTCTTC CACGCGGATTGCTTGGAGGAAAGCACTGCCAAGACAGAAGTCCATGAACCACCTTGCCCC CTGTGCGCGCGAGCCACTGACGATGAAGGGCACGTGTCGTTCTCAGAACCTCTGCATGTT GCCCTCCGATCTGCTCGCAGGAACCTTTTGTTGGGCACTGGTGCTGGTGGGAACAGCGGC ATTTCTGACCCTCCTCGCACTGATCGTGGCTTGAAGAGGAACAACTCTGCAGTCATGCCT AGGCGCAGCGGCGGCGCATTGTTCCGCAATCGCTTCAAGAAACAGTTCCCCTTCAAAGCG AGGATCGGGAAGGAGCTCTTTGGCGGTAGGGTTCTCAACAAGGTTGGATTGTCTTTGTCT TCAGGTCAGCATGATGATCATCGACAGCAAGCGCCAAAGCATGACCGGCCCATGAAGTAG

Peptide Sequence

PEP ID	Zm00001d047558_P004
PEP Infomation	pep chromosome:B73_RefGen_v4:9:135453764:135457008:1 gene:Zm00001d047558 transcript:Zm00001d047558_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING/U-box superfamily protein
Sequence	MDPTEPRWRINSSFSPPTSRRWDCRYSSDGLPHRVHDAPHDHPPYVSSLSSHSKGSRNAF GSDQYLSHHHSVSDGALSYFGSPADSLQAPRWTPSLQRFDLGEFSTPAGGSRPETSDYPQ SSERPLTATSSFSSASPFSESSQLASSSKQPAPYLPRNHMGRRSFMSKPVYPLVFRNPVS ESEACRMLEVGNAGRATPSDDSQASPLWRRSLASPDLKFHNAPNELGKMETSPEPNTSSR REGFRWSNASSYDFGYDGDAIDISDHISIESQRSPTSSARFLKCGLCERFLHQKSPWTSN RIVRNADMPVAAVLPCRHVFHADCLEESTAKTEVHEPPCPLCARATDDEGHVSFSEPLHV ALRSARRNLLLGTGAGGNSGISDPPRTDRGLKRNNSAVMPRRSGGALFRNRFKKQFPFKA RIGKELFGGRVLNKVGLSLSSGQHDDHRQQAPKHDRPMK

Transcript Sequence

Transcript ID	Zm00001d047558_T004
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:135453764:135457008:1 gene:Zm00001d047558 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING/U-box superfamily protein
Sequence	AGGTGACCCTATTCCTTTTCTTCACTCGGTGTATAATCCCCCTTTGCTGCAATCAAGCTT CTCAAACATAATAAGCAAATAGTCTCTTCACGTGATTGCCAAAATTAGTCAAGACGGGTG CTCTTTGCTGCGTGGCCGCTAGGCCACATGGGACGAAGTCTGACCCTGCAAGCAGAGATC GTTCTATGGATCCTACTGAGCCTCGTTGGCGCATAAACTCGAGCTTCTCTCCCCCAACAT CAAGGAGATGGGACTGTCGTTATTCATCAGATGGATTGCCCCACAGAGTTCATGATGCTC CTCATGATCACCCACCTTATGTTTCATCATTGTCATCCCATAGCAAAGGAAGCAGAAATG CATTTGGCAGTGATCAGTACCTCAGTCACCATCATTCTGTGTCTGATGGAGCACTTTCTT ATTTTGGGAGTCCAGCTGACAGCCTTCAGGCTCCACGCTGGACGCCCTCTCTTCAAAGAT TTGATCTTGGTGAATTCTCTACCCCTGCAGGAGGATCAAGGCCAGAAACTTCTGACTATC CTCAGTCAAGTGAGAGGCCACTGACTGCCACAAGCAGTTTCAGTTCTGCATCCCCATTTT CAGAATCAAGCCAGTTAGCTTCATCTAGTAAACAACCAGCCCCATATCTACCTCGCAACC ATATGGGCAGGCGGTCTTTCATGTCTAAACCAGTCTACCCACTTGTCTTCCGGAATCCTG TCTCAGAATCAGAAGCGTGCAGGATGCTTGAGGTTGGTAATGCCGGGCGAGCGACACCAA GTGATGACAGCCAAGCTTCTCCTCTGTGGCGTCGCAGCTTGGCGAGCCCAGATCTCAAGT TCCACAATGCACCGAATGAACTTGGGAAGATGGAAACCTCACCCGAACCGAACACAAGCT CAAGAAGGGAAGGGTTCAGATGGAGCAACGCCAGCAGTTATGACTTTGGATACGATGGAG ATGCCATTGACATTTCAGATCATATCAGCATCGAGTCCCAGAGATCTCCCACGAGCTCAG CGAGGTTCCTGAAGTGTGGGCTGTGCGAGAGATTCCTGCACCAGAAATCACCCTGGACCT CGAACAGGATTGTTCGAAACGCCGACATGCCAGTGGCAGCAGTTCTGCCTTGCCGACATG TCTTCCACGCGGATTGCTTGGAGGAAAGCACTGCCAAGACAGAAGTCCATGAACCACCTT GCCCCCTGTGCGCGCGAGCCACTGACGATGAAGGGCACGTGTCGTTCTCAGAACCTCTGC ATGTTGCCCTCCGATCTGCTCGCAGGAACCTTTTGTTGGGCACTGGTGCTGGTGGGAACA GCGGCATTTCTGACCCTCCTCGCACTGATCGTGGCTTGAAGAGGAACAACTCTGCAGTCA TGCCTAGGCGCAGCGGCGGCGCATTGTTCCGCAATCGCTTCAAGAAACAGTTCCCCTTCA AAGCGAGGATCGGGAAGGAGCTCTTTGGCGGTAGGGTTCTCAACAAGGTTGGATTGTCTT TGTCTTCAGGTCAGCATGATGATCATCGACAGCAAGCGCCAAAGCATGACCGGCCCATGA AGTAGCTAGATCTTAGTGGCACAGAGTATAATATGTTGTGTGCCCTCCTGATATTTTATC TATGGCATCTGTTATCGAAACTTGGCATCCATGCGCAGCAGTCGTCCAAGATGGGGGCCC TG