Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d047538_T004
CDS Infomation

cds chromosome:B73_RefGen_v4:9:134287365:134292209:1 gene:Zm00001d047538 gene_biotype:protein_coding transcript_biotype:protein_coding description:Endo-1%2C4-beta-glucanase

Sequence

ATGAGCATGTACGGGAGGGATCCCTGGGGCGGCCCGCTGGAGATATGCCACGACTCGGCC
ACGGACGACGACCGCAGCCGCAACCTGGACATCGACCGGGCCGCGCTGTCGCGGACGCTC
GACGAGACGCAGCAGAGCTGGCTGCTGGCGGGGACCGCCGACCAGCCCCGCAAGAAGAAC
AAGTACGTCGACATCGGCTGCCTCCTCGTCAGCCGCAAGCTCTTCGTCTGGACGCTCGGC
GTGCTCCTCGCCGCCGCCGTGTTCGCGGGGGCCGTGGCCGGGATCGCCAAGGCCATCCCC
AGGCGGCACCGCCCGCTGCCACCGCCCGACGACTACACCGTCGCGCTGCACAAGGCGCTC
ATGTTCTTCCATGCCCAGAGATCTGGGAAGCTTCCGAAGCACAACAATATACATTGGCGC
GGTAACTCTTGCATGAAGGACGGGCTTTCTGACCCTGCAGTCAGGCGAAGCCTGGTTGGC
GGGTATTATGATGCCGGCGACGCCGTCAAGTTCAATTTCCCAGCTGCCTTCTCCATGACC
CTCCTCAGCTGGAGCGTCATTGAGTACAGTGCCAAGTACGACGCTGTTGGGGAACTTGGC
CATGTCCGTGACATTATCAAGTGGGGGTCAGACTACTTCTTGAAGACCTTTAATTCCACA
GCCGATAGCATTGATCGTGTCATTGCGCAGGTGGGAGGTGGTGCGACGTCGCCTGGTTCG
ACACAGCCCAATGATCGGTATTGTTGGATGAGGCCAGAGGACATTGACTACCCACGTCCA
GTGGTTGAGTGCCACACTTGTTCAGATCTTGCTGCTGAAATGGCTGCAGCATTAGCTGCA
GCGTCGATTGTATTCAAGGACAACAAGGCTTACTCACAGAAGCTTGTACATGGTGCTACC
ACTCTCTTCCAGTTCGCAAGGGACCGGCGTGGGAGGTATAGCGCAGGTGGATCGTATGCT
GCAAAGTTCTACAATTCAACTAGTTACTGGGATGAGTTTCTGTGGGGTAGCTCATGGATG
TACCTTGCAACTGGCAATTCATCATACTTGACTCTAGCCACAAACCCTAAACTTGCGAAG
CATGCTGGCGCTTTCTGGGGTGGACCGGATTATGGTGTGTTCAGCTGGGATAATAAGCTC
ACTGGTGCACAGGTAAATGTTTTGAACTTATCTTTCTTAATTAAATGTTTGGACATTCCT
CACAATGCCAACCCTGATGTGGTATGGGCCTATACATTACTTATCCTTTTTATTTATCTT
ACATTCCAGGTTCTTCTAAGTCGGTTGAGGCTTTTCTTAAGTCCTGGATATCCATACGAA
GAGATCTTGAGGACGTTCCACAATCAAACTAGCATTATCATGTGTTCCTACCTTCCAGTC
TTTAAATCCTTCAACAGAACAAGAGGTGGTCTGATCCAGCTAAATCACGGGAAACCACGG
CCCCTCCAGTATGTGGTCAACGCTGCATTCCTTGCTTCTGTGTTCAGTGACTATCTTGAG
GCTGCGGATACTCCTGGGTGGTATTGTGGCCCCCATTTCTACTCTGTTGAGGTTCTTCGC
AGTTTTGCAAGGACTCAGATCGATTACATCTTAGGAAAGAATCCTTTGAAGATGAGCTAC
GTGGTTGGGTTCGGAAAGCGTTACCCCAGGCATGTTCACCACCGGGGCGCCTCGATCCCT
AAGAACGGTGTTCACTATGGCTGCAAAGGAGGGTGGAAGTGGAGGGACGCCAAGAAGCCA
AACCCTAATACCATAGCAGGTGCCATGGTTGCTGGCCCCGACCGCCATGACGGGTTCAAA
GATGCCCGCAGGAACTACAACTACACTGAAGCAACGCTGGCGGGCAACGCTGGTCTAGTC
GCCGCATTGGTAGCTTTGTCGGGTGACGGCCACGGCGGGGTGGACAAGAACACCATGTTC
TCTGCAGTACCGCCCATGTTCCCTTCGCCTCCGCCGCCGCCGGCTCCATGGAAACCGTGA

Peptide Sequence

PEP ID

Zm00001d047538_P004
PEP Infomation

pep chromosome:B73_RefGen_v4:9:134287365:134292209:1 gene:Zm00001d047538 transcript:Zm00001d047538_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:Endo-1%2C4-beta-glucanase

Sequence

MSMYGRDPWGGPLEICHDSATDDDRSRNLDIDRAALSRTLDETQQSWLLAGTADQPRKKN
KYVDIGCLLVSRKLFVWTLGVLLAAAVFAGAVAGIAKAIPRRHRPLPPPDDYTVALHKAL
MFFHAQRSGKLPKHNNIHWRGNSCMKDGLSDPAVRRSLVGGYYDAGDAVKFNFPAAFSMT
LLSWSVIEYSAKYDAVGELGHVRDIIKWGSDYFLKTFNSTADSIDRVIAQVGGGATSPGS
TQPNDRYCWMRPEDIDYPRPVVECHTCSDLAAEMAAALAAASIVFKDNKAYSQKLVHGAT
TLFQFARDRRGRYSAGGSYAAKFYNSTSYWDEFLWGSSWMYLATGNSSYLTLATNPKLAK
HAGAFWGGPDYGVFSWDNKLTGAQVNVLNLSFLIKCLDIPHNANPDVVWAYTLLILFIYL
TFQVLLSRLRLFLSPGYPYEEILRTFHNQTSIIMCSYLPVFKSFNRTRGGLIQLNHGKPR
PLQYVVNAAFLASVFSDYLEAADTPGWYCGPHFYSVEVLRSFARTQIDYILGKNPLKMSY
VVGFGKRYPRHVHHRGASIPKNGVHYGCKGGWKWRDAKKPNPNTIAGAMVAGPDRHDGFK
DARRNYNYTEATLAGNAGLVAALVALSGDGHGGVDKNTMFSAVPPMFPSPPPPPAPWKP

Transcript Sequence

Transcript ID

Zm00001d047538_T004
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:134287365:134292209:1 gene:Zm00001d047538 gene_biotype:protein_coding transcript_biotype:protein_coding description:Endo-1%2C4-beta-glucanase

Sequence

ACCACACCACACTACTCCAAAATCTATCCGTTAACAAAACAAGCCGGCAGCCAAGTACAG
TACAGTACAGCAGACATGCGTCCCCATCCGTGATATCCCGTCCCGTCCCACTACTACTGG
GACCCTTCCTTCCCACCGCCACCGCTCACTACTCCGGCCGCCTCTCTTCCAGCAAATCCC
TCCCACCTCCTCCCCGCCGTCTCACGAGGAGCTAGAGGAAGGGGAGGCTCTGTACCAGCC
TGTTGGAAGGGGGCGAGATGAGCATGTACGGGAGGGATCCCTGGGGCGGCCCGCTGGAGA
TATGCCACGACTCGGCCACGGACGACGACCGCAGCCGCAACCTGGACATCGACCGGGCCG
CGCTGTCGCGGACGCTCGACGAGACGCAGCAGAGCTGGCTGCTGGCGGGGACCGCCGACC
AGCCCCGCAAGAAGAACAAGTACGTCGACATCGGCTGCCTCCTCGTCAGCCGCAAGCTCT
TCGTCTGGACGCTCGGCGTGCTCCTCGCCGCCGCCGTGTTCGCGGGGGCCGTGGCCGGGA
TCGCCAAGGCCATCCCCAGGCGGCACCGCCCGCTGCCACCGCCCGACGACTACACCGTCG
CGCTGCACAAGGCGCTCATGTTCTTCCATGCCCAGAGATCTGGGAAGCTTCCGAAGCACA
ACAATATACATTGGCGCGGTAACTCTTGCATGAAGGACGGGCTTTCTGACCCTGCAGTCA
GGCGAAGCCTGGTTGGCGGGTATTATGATGCCGGCGACGCCGTCAAGTTCAATTTCCCAG
CTGCCTTCTCCATGACCCTCCTCAGCTGGAGCGTCATTGAGTACAGTGCCAAGTACGACG
CTGTTGGGGAACTTGGCCATGTCCGTGACATTATCAAGTGGGGGTCAGACTACTTCTTGA
AGACCTTTAATTCCACAGCCGATAGCATTGATCGTGTCATTGCGCAGGTGGGAGGTGGTG
CGACGTCGCCTGGTTCGACACAGCCCAATGATCGGTATTGTTGGATGAGGCCAGAGGACA
TTGACTACCCACGTCCAGTGGTTGAGTGCCACACTTGTTCAGATCTTGCTGCTGAAATGG
CTGCAGCATTAGCTGCAGCGTCGATTGTATTCAAGGACAACAAGGCTTACTCACAGAAGC
TTGTACATGGTGCTACCACTCTCTTCCAGTTCGCAAGGGACCGGCGTGGGAGGTATAGCG
CAGGTGGATCGTATGCTGCAAAGTTCTACAATTCAACTAGTTACTGGGATGAGTTTCTGT
GGGGTAGCTCATGGATGTACCTTGCAACTGGCAATTCATCATACTTGACTCTAGCCACAA
ACCCTAAACTTGCGAAGCATGCTGGCGCTTTCTGGGGTGGACCGGATTATGGTGTGTTCA
GCTGGGATAATAAGCTCACTGGTGCACAGGTAAATGTTTTGAACTTATCTTTCTTAATTA
AATGTTTGGACATTCCTCACAATGCCAACCCTGATGTGGTATGGGCCTATACATTACTTA
TCCTTTTTATTTATCTTACATTCCAGGTTCTTCTAAGTCGGTTGAGGCTTTTCTTAAGTC
CTGGATATCCATACGAAGAGATCTTGAGGACGTTCCACAATCAAACTAGCATTATCATGT
GTTCCTACCTTCCAGTCTTTAAATCCTTCAACAGAACAAGAGGTGGTCTGATCCAGCTAA
ATCACGGGAAACCACGGCCCCTCCAGTATGTGGTCAACGCTGCATTCCTTGCTTCTGTGT
TCAGTGACTATCTTGAGGCTGCGGATACTCCTGGGTGGTATTGTGGCCCCCATTTCTACT
CTGTTGAGGTTCTTCGCAGTTTTGCAAGGACTCAGATCGATTACATCTTAGGAAAGAATC
CTTTGAAGATGAGCTACGTGGTTGGGTTCGGAAAGCGTTACCCCAGGCATGTTCACCACC
GGGGCGCCTCGATCCCTAAGAACGGTGTTCACTATGGCTGCAAAGGAGGGTGGAAGTGGA
GGGACGCCAAGAAGCCAAACCCTAATACCATAGCAGGTGCCATGGTTGCTGGCCCCGACC
GCCATGACGGGTTCAAAGATGCCCGCAGGAACTACAACTACACTGAAGCAACGCTGGCGG
GCAACGCTGGTCTAGTCGCCGCATTGGTAGCTTTGTCGGGTGACGGCCACGGCGGGGTGG
ACAAGAACACCATGTTCTCTGCAGTACCGCCCATGTTCCCTTCGCCTCCGCCGCCGCCGG
CTCCATGGAAACCGTGACGGCCTGTGGGGGTATGGTATGGTATGGTATCTGATTCTTTTG
TATACTGCTTTATTTATTTAGATTTAGATTAGTGTTCCCTCTCGCCGTACTGCTACCATC
ACAATCATGGAGATCTAACAGTATGTAGCTCCGGTCTTTTTTTTCATTGTTTTTATATTT
TGCCGTGCAATGTAAAGGACTAGTACTACGTTTTGCATGGATCTCGGGGTCAGTAACTGA
TATCCTGGGGATTTGTGGTAACTAAAGCCCATCTCTGTGCTTCCGTGAATGAGTGGAATT
CGAAAATTTCAGCCGC