Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d047537_T007
CDS Infomation

cds chromosome:B73_RefGen_v4:9:134253846:134260101:1 gene:Zm00001d047537 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transferase

Sequence

ATGATAGATACCATTGTGAAAAGGCTGAAAGATCAGCTGTTTGTAGCCCGATCTTACTAC
CCAAGCATTGCGAAACTTAAAGGAAAGGAGACATTGACTCGTGAACTGAAGCAAAATATT
CAAGAGCACGAGAGGGTCCTTAGTGAATCCATCGTTGATGCTGATCTACCATCCTTTATA
AAAACGAAGGTCGAGAGGATGGACCAATCAATAGCAAGAGCCAAATCATGCACTGTGGAT
TGCAACAATGTTGACAGAAAGCTTCGTCAAATTCTTCATATGACAGAGGATGAAGCTCAT
TTTCATATGAAGCAGAGCGCATACCTGTACAACCTTGGTGTTCACACCATGCCTAAAAGT
CATCATTGTCTTAATATGAGATTGACAGTAGAGTACTTCAAATCCATGCCATTGGATCCA
AATGACTCTTCTGCCCATACGTTTAACATTCCAGACAATAGGCACTATGTTATATTGTCT
AAAAATGTCCTTGCTGCTTCTGTTGTCATCAACTCAACTGTTAGTAGCTCTGAGGATACT
GAAAATATAGTCTTTCATGTACTAACTGATGCTCAAAATTTTTATGCCATGAAGCACTGG
TTTGCAAGAAACTCCTACAGGGAATCAGCTGTGAATGTCATAAATTATGAACAAATTATT
TTCGAGAATTTCCCTGAGTTTGGAACCCAGCAGTTATATTTGCCTGAGGAATTTCGTGTT
TTCATCAGTAGCCTTGAGCGGCCTACTGAGAAGAGTAGAATGGAGTATTTATCAGTGTTC
AGTCACTCACATTTCTTTCTTGCCGAAATATTCAAAGATTTAAAGAAGGTAATTGTGTTG
GATGATGATTTGGTCGTTCAACATGATCTCTCTTTCTTGTGGAATCTTGATATGGGAGAT
AAGGTCCATGGTGCTGTCAGATTTTGTGGTTTGAAACTTGGCCAACTGAGGAACCTTCTG
GGTAGGACAATGTACGATCAACAGTCATGTGCATGGATGTCGGGGGTTAATGTGATTGAT
TTGGAAAAATGGAGAGATCATAATGTTACAGAGAATTACCTGCAACTCCTGAGAAAGTTT
GGGAACAATGGTGATGAGGCCTCATTGCGATCTTCAGCTTTGCCTATAAGTTTGTTGTTG
TTCCAGCATCTTCTTTATCCCCTTGATGAGAGATTGACTTTATCTGGACTTGGATATGAC
TATGGAATTAAAGAAAAACTTGTTCAGAGTTCTGCATCATTGCATTACAATGGAAATATG
AAACCTTGGCTTGAGTTGGGCATACCAGATTATAGGAAGTACTGGAAGAGGTTTCTTACA
CGAGACGAGAGATTCATGGATGAGTGCAATGTAAGTCCATAG

Peptide Sequence

PEP ID

Zm00001d047537_P007
PEP Infomation

pep chromosome:B73_RefGen_v4:9:134253846:134260101:1 gene:Zm00001d047537 transcript:Zm00001d047537_T007 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transferase

Sequence

MIDTIVKRLKDQLFVARSYYPSIAKLKGKETLTRELKQNIQEHERVLSESIVDADLPSFI
KTKVERMDQSIARAKSCTVDCNNVDRKLRQILHMTEDEAHFHMKQSAYLYNLGVHTMPKS
HHCLNMRLTVEYFKSMPLDPNDSSAHTFNIPDNRHYVILSKNVLAASVVINSTVSSSEDT
ENIVFHVLTDAQNFYAMKHWFARNSYRESAVNVINYEQIIFENFPEFGTQQLYLPEEFRV
FISSLERPTEKSRMEYLSVFSHSHFFLAEIFKDLKKVIVLDDDLVVQHDLSFLWNLDMGD
KVHGAVRFCGLKLGQLRNLLGRTMYDQQSCAWMSGVNVIDLEKWRDHNVTENYLQLLRKF
GNNGDEASLRSSALPISLLLFQHLLYPLDERLTLSGLGYDYGIKEKLVQSSASLHYNGNM
KPWLELGIPDYRKYWKRFLTRDERFMDECNVSP

Transcript Sequence

Transcript ID

Zm00001d047537_T007
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:134253846:134260101:1 gene:Zm00001d047537 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transferase

Sequence

CCGCGCCATTGTCGAACCAGGAGGGTTCGTCCGCCCGCGCCTGCTGCCCCGCACTCCCGC
GCCGTGGCGGTGGCGTTGGCGGTATGTATGATCGCTAGAGGGAGAGGAGGAGGTGGCAGC
ACCGGTGGGGATTAGGGTGGCGGCAGTGCTGGTGCCGGAGGAGGAGGCGTAGCCCATGAA
GGCGACGGCGCCGCCGGCAAAGCGGCGGAGGGGCCCGCGGCTGGCGGTGCTGGCGCTCGT
GTTCTGTTCGCTGCTCGTGCCGATCGCCTTCCTCTTCAACCGCTTCCCCGCCGTGTATGT
GACGGATGAGCGCCCTCAGCAGGAGATTGACTTGCCTTCATTCGATCGCGTGGCATTTGA
AAGTGGTGGATCTGTAAATGAAGTAAGCGGGGCAGTGCTTGTGATGTGTTCAAGAAGACT
TCTGGGAGCAGTAGTGTGTCGCACCATGGTATTGATACTGGCCCTTCCATAGTTAGGACT
GAACCAAAAGTTATAGTTCTCCCGCCTCCAAAAATTGAACTAGTCCTCCCCCCTCCAAAA
GTTGAACCCAAACCAGAAGTGAAGCCAGTACCAGTATCAGTTCCAGTTCATCATAACAAA
AAAATTAACGTTGACAAGATTAGGCCTCCTAGAGTTCAAAGTGCTGATGAGGTGGAAAAG
GCTAAGGCTTGTCAACTTGAGTTTGGGAGTTACTGTCTCTGGTCCATAGAGCACAAAGAA
GTTATGATAGATACCATTGTGAAAAGGCTGAAAGATCAGCTGTTTGTAGCCCGATCTTAC
TACCCAAGCATTGCGAAACTTAAAGGAAAGGAGACATTGACTCGTGAACTGAAGCAAAAT
ATTCAAGAGCACGAGAGGGTCCTTAGTGAATCCATCGTTGATGCTGATCTACCATCCTTT
ATAAAAACGAAGGTCGAGAGGATGGACCAATCAATAGCAAGAGCCAAATCATGCACTGTG
GATTGCAACAATGTTGACAGAAAGCTTCGTCAAATTCTTCATATGACAGAGGATGAAGCT
CATTTTCATATGAAGCAGAGCGCATACCTGTACAACCTTGGTGTTCACACCATGCCTAAA
AGTCATCATTGTCTTAATATGAGATTGACAGTAGAGTACTTCAAATCCATGCCATTGGAT
CCAAATGACTCTTCTGCCCATACGTTTAACATTCCAGACAATAGGCACTATGTTATATTG
TCTAAAAATGTCCTTGCTGCTTCTGTTGTCATCAACTCAACTGTTAGTAGCTCTGAGGAT
ACTGAAAATATAGTCTTTCATGTACTAACTGATGCTCAAAATTTTTATGCCATGAAGCAC
TGGTTTGCAAGAAACTCCTACAGGGAATCAGCTGTGAATGTCATAAATTATGAACAAATT
ATTTTCGAGAATTTCCCTGAGTTTGGAACCCAGCAGTTATATTTGCCTGAGGAATTTCGT
GTTTTCATCAGTAGCCTTGAGCGGCCTACTGAGAAGAGTAGAATGGAGTATTTATCAGTG
TTCAGTCACTCACATTTCTTTCTTGCCGAAATATTCAAAGATTTAAAGAAGGTAATTGTG
TTGGATGATGATTTGGTCGTTCAACATGATCTCTCTTTCTTGTGGAATCTTGATATGGGA
GATAAGGTCCATGGTGCTGTCAGATTTTGTGGTTTGAAACTTGGCCAACTGAGGAACCTT
CTGGGTAGGACAATGTACGATCAACAGTCATGTGCATGGATGTCGGGGGTTAATGTGATT
GATTTGGAAAAATGGAGAGATCATAATGTTACAGAGAATTACCTGCAACTCCTGAGAAAG
TTTGGGAACAATGGTGATGAGGCCTCATTGCGATCTTCAGCTTTGCCTATAAGTTTGTTG
TTGTTCCAGCATCTTCTTTATCCCCTTGATGAGAGATTGACTTTATCTGGACTTGGATAT
GACTATGGAATTAAAGAAAAACTTGTTCAGAGTTCTGCATCATTGCATTACAATGGAAAT
ATGAAACCTTGGCTTGAGTTGGGCATACCAGATTATAGGAAGTACTGGAAGAGGTTTCTT
ACACGAGACGAGAGATTCATGGATGAGTGCAATGTAAGTCCATAGTGCACTTGAGCTTGA
GAGCCGGATCATTTTTGACAGTAGATTTCAGTCTACACTGCTGTAATATATACTAAGAGG
ACCAACACTTCCATTGAGAAAAGACTTGGGAAGCAGTCACTAGCCATCAATTTTGACAGA
GTAGATCCAGCGCCATCTGTTGAGTGAACTTGTGAGCTCGATGGATGGTTTTTTCTGCAG
TTAGAGGACTTTAGTGTTAAGTTTGAAGGATAATGCAGTAGACAACGTTGGTGGTGTGTG
GTGGTGAGGCTCCACGTAAGAGGGAGCATCACACTACGTAACAGGAATGATCTTTGGTGG
ATTGGGGCGTCTTAATTCAAATTGGTGCCTTCCATCTCATCGATTCAGGTTAATTCTTTT
CTTTGTTGATTGATTTGTTGACCCCTCTTGCTTTGTCCTTCTGTCAATAAGGACATACAC
AGGTTAAAATTCAATTTCTTTGCTCGTAGTTGTTGCACATTGATTGTTCTATCATTATTA
TGTTGATGCAAAGTATATTATGATG