Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d047536_T058
CDS Infomation

cds chromosome:B73_RefGen_v4:9:134143393:134147368:1 gene:Zm00001d047536 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCGGTGTACGTTGTTGATATCGGATTGTAAGCCCTCTGAGCTCCCACTACAGCAGAAT
TCTACAACTGAGAAAGTTGACAAGGATGAGAATGCACATAAACCTTGCATCAGTCCTCAG
ACTAATCTTCAGATGCCCATTGCCAATAATGTATCTCCAGCAAAGCTTGCACAAATTGAG
CGTGAGAGCTCAACAGAAAGTGATGATTCCTCTGAATCCAGTGATGAAGGTGAGGCCATT
GTTGAAAGGAGCCGTCCTCTTGTAAGATCTGCTTCACCTAGAAGATCTGCTTCTCCAATG
CGGAGGGTTCAAATTGGGAGATCAGGATCACGTCGTTCAACAGCAATTGCTATCAAGAGC
CTCAGTTACTTCCCTCCTAGTCAGAGGATTCCTATGGATAAAGATGATGAAAGTAGTACC
TTCAATGGTGAAACTGATCAGCCACCAAAGAAATCTGACACTAACGTTAGAAGGATGAGT
GTTCAGGATGCAATTAACCTTTTTGAGAGCAAGCAGAAGGATCAGAATCCAGATTCACAA
AATAAGAAAGCTGGCTTGTTTGCCACTAAGTCTGTCTTGAGAAGGTGGAGTGCAGGAATG
GGTGATTCTTTGAATGAAAACTCAGAAGGAAAAGTCTCAGATTCCACATCTGAAAGTAAA
TCAAACAACATAGCTTCTGAAACTGAGAAGGTTGAAGCTGAAATGAAGGCTGAACTAGGT
AACATACCAAATTTTTTTGTTACACCTGAGGCTGAAGATTTAACTTTCCATGCTAATTCT
CATGAGATTAGAGTGTCAGAAACGGAGAGTGCTGTTTGTAGTAATGTTTGTGCAGAACAA
GCAAAGCCTGGTCTGGAGGAAAGCAGTGATCGGGCAATGGCCTCCGCTGAGTGGAATCGC
CAGAAGGAAGCCGAGCTTAATCAGATGTTATTGAAAATGATGGAAGTCATGCCTGGGAAA
TTTGCGGGTGCTAATGCCACCGCTACAGGTCTCAGTTCCACCAATCAGCAAAAAGCTGTA
TCTCATGGCCAGCATACAGAGAAGCGAGACACAAAAGTCAGAACTGAGAAAGGCACAAGG
CGACCAGCAAAGGAACCAAGCACCAAGCCCTTGAAGGAAACAGCTGGGAAGAATAAACCA
GCAATGACCTCGAAATCTGGCTCTTCAACAGAGAGACGTATTTCACCAGTTCCACAAAGG
GCGCGGCGAAATTCATCACCTCCAGTCCTACCGAAAGAAGTAGCATCAAAGACACCACCA
GTCAGGAAAAGCTCACCGAAACCATCACCTGCACCTGCATCTGTGCCTACTACACGTAGT
TCATGGTCAGGTGGTTCTTTGACTAAAGCAACTACAACACAAAAAACTAAAAGGTCTCCT
GGGATGGCTTCAACGTCCACACAAACTAGCCGAAGGACTCCAACAACGCCCTCGTCGTCT
CAGCCAGCTTCAAAAGCGGAAAGGGCCATTCAATCAGTGAAGAACAAGAAGGAAACCATT
ACTGCTACCAAGCCAGCTATAAAGGGACAAGAAGAGAAGAAGACCAAAACAGCAACAAAG
ACAAGCAGAATAACTAAAGTTTCACCTTCAGAAGAAAAATCAGGTGTAAAAACGAAGCAA
AGCTTGCAAAAGGTTTCAAATAAAAGCAGTGTTGTACCTCTTGAGTCCAAAACCTTGAAG
AAAACCACTGGAATTAGTCAGAGCATTAGGTCTGGTATGGTGAAGAATAAGGTACCCCAA
CCTAATGACTTCTCAAAAGATACCGGAAGTGTTAACCAAGCTGAAGATAAGGAGCAATCT
CCTGTGACAACCGAGCCAACTACTAAGGTACTGGAGGCTGATCTTGCTCAACCAGCACAT
GATGTTGATGAAAATTTAGAAATTTCGCTCGATAATGACTTGAATATTGAAAAAACAGAG
AAACCGGCCTCGAGTTTAACTGCAACAGAAATGGGCTCCAGTATCCAAGTTGAACCCTCT
ACGGATGAGTTAGATGAGGCCATACAACCTCCTGACGATGACATGGGCATCTCATCATCT
GCGTGGGTAGAAGTAGAGCGTCAAGAACTAGAAGTCACTGTTTCGAGTGAAAATGTAGTT
GTTGAGGATGTAACTTCTCCAGGAATTGCACCATTGCCGTCATCAAGCCCAAGAGTGCGT
CATTCGTTGTCACAAATGCTGCAAGCAGATAGCAATGAACCAGAAATTATTGAGTGGGGA
AATGCTGAAAACCCACCCGCAATAGTTTTTCATAAGGATTCTCCAAAAGGATTCAAGAGG
CTTCTAAAGTTTGCTCGAAAAAACAAGGGAGACAACAATGCTAACGGCTGGGCAAGCCCC
TCGGTAGTTTCAGAAGGAGAAGATGAACTAGAAGAACCAAGAGGCACTAGTGATGGTACA
AATTCAAGCAGGAGAACTTTTGATGGTTCAAAGACTAATAGCATCTTATCAGCTCAATCA
ACTACCGGCAGCTTCAACTCTTTGAACTCGGATAAGCTACGGGAGAGATCAGGTGCTGCC
ACATCAACAAGAGCATCAAGGTCGTTCTTCTCACTCTCAAACTTCCGGAGCAGCAGGTCA
AATGAGTCGAAGCTTCGATAG

Peptide Sequence

PEP ID

Zm00001d047536_P058
PEP Infomation

pep chromosome:B73_RefGen_v4:9:134143393:134147368:1 gene:Zm00001d047536 transcript:Zm00001d047536_T058 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MRCTLLISDCKPSELPLQQNSTTEKVDKDENAHKPCISPQTNLQMPIANNVSPAKLAQIE
RESSTESDDSSESSDEGEAIVERSRPLVRSASPRRSASPMRRVQIGRSGSRRSTAIAIKS
LSYFPPSQRIPMDKDDESSTFNGETDQPPKKSDTNVRRMSVQDAINLFESKQKDQNPDSQ
NKKAGLFATKSVLRRWSAGMGDSLNENSEGKVSDSTSESKSNNIASETEKVEAEMKAELG
NIPNFFVTPEAEDLTFHANSHEIRVSETESAVCSNVCAEQAKPGLEESSDRAMASAEWNR
QKEAELNQMLLKMMEVMPGKFAGANATATGLSSTNQQKAVSHGQHTEKRDTKVRTEKGTR
RPAKEPSTKPLKETAGKNKPAMTSKSGSSTERRISPVPQRARRNSSPPVLPKEVASKTPP
VRKSSPKPSPAPASVPTTRSSWSGGSLTKATTTQKTKRSPGMASTSTQTSRRTPTTPSSS
QPASKAERAIQSVKNKKETITATKPAIKGQEEKKTKTATKTSRITKVSPSEEKSGVKTKQ
SLQKVSNKSSVVPLESKTLKKTTGISQSIRSGMVKNKVPQPNDFSKDTGSVNQAEDKEQS
PVTTEPTTKVLEADLAQPAHDVDENLEISLDNDLNIEKTEKPASSLTATEMGSSIQVEPS
TDELDEAIQPPDDDMGISSSAWVEVERQELEVTVSSENVVVEDVTSPGIAPLPSSSPRVR
HSLSQMLQADSNEPEIIEWGNAENPPAIVFHKDSPKGFKRLLKFARKNKGDNNANGWASP
SVVSEGEDELEEPRGTSDGTNSSRRTFDGSKTNSILSAQSTTGSFNSLNSDKLRERSGAA
TSTRASRSFFSLSNFRSSRSNESKLR

Transcript Sequence

Transcript ID

Zm00001d047536_T058
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:134143393:134147368:1 gene:Zm00001d047536 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGGGAAATGATGGGCCAAATTCATCGGATACGACAAAGAATGAATTGCTTCGAGCACTGG
ATTTGAGATTAACTGCACTGAAGGAAGAGATCTTGGTCGTATTGAACCGAGCAGTTGGAT
CCAATTTATCGGCAAGAGAAATATCTGATTTATCTGCTTTTGTTCAGCGATTTGGAACAT
CAGAGTTTTGTTGGTTGATGCGGTGTACGTTGTTGATATCGGATTGTAAGCCCTCTGAGC
TCCCACTACAGCAGAATTCTACAACTGAGAAAGTTGACAAGGATGAGAATGCACATAAAC
CTTGCATCAGTCCTCAGACTAATCTTCAGATGCCCATTGCCAATAATGTATCTCCAGCAA
AGCTTGCACAAATTGAGCGTGAGAGCTCAACAGAAAGTGATGATTCCTCTGAATCCAGTG
ATGAAGGTGAGGCCATTGTTGAAAGGAGCCGTCCTCTTGTAAGATCTGCTTCACCTAGAA
GATCTGCTTCTCCAATGCGGAGGGTTCAAATTGGGAGATCAGGATCACGTCGTTCAACAG
CAATTGCTATCAAGAGCCTCAGTTACTTCCCTCCTAGTCAGAGGATTCCTATGGATAAAG
ATGATGAAAGTAGTACCTTCAATGGTGAAACTGATCAGCCACCAAAGAAATCTGACACTA
ACGTTAGAAGGATGAGTGTTCAGGATGCAATTAACCTTTTTGAGAGCAAGCAGAAGGATC
AGAATCCAGATTCACAAAATAAGAAAGCTGGCTTGTTTGCCACTAAGTCTGTCTTGAGAA
GGTGGAGTGCAGGAATGGGTGATTCTTTGAATGAAAACTCAGAAGGAAAAGTCTCAGATT
CCACATCTGAAAGTAAATCAAACAACATAGCTTCTGAAACTGAGAAGGTTGAAGCTGAAA
TGAAGGCTGAACTAGGTAACATACCAAATTTTTTTGTTACACCTGAGGCTGAAGATTTAA
CTTTCCATGCTAATTCTCATGAGATTAGAGTGTCAGAAACGGAGAGTGCTGTTTGTAGTA
ATGTTTGTGCAGAACAAGCAAAGCCTGGTCTGGAGGAAAGCAGTGATCGGGCAATGGCCT
CCGCTGAGTGGAATCGCCAGAAGGAAGCCGAGCTTAATCAGATGTTATTGAAAATGATGG
AAGTCATGCCTGGGAAATTTGCGGGTGCTAATGCCACCGCTACAGGTCTCAGTTCCACCA
ATCAGCAAAAAGCTGTATCTCATGGCCAGCATACAGAGAAGCGAGACACAAAAGTCAGAA
CTGAGAAAGGCACAAGGCGACCAGCAAAGGAACCAAGCACCAAGCCCTTGAAGGAAACAG
CTGGGAAGAATAAACCAGCAATGACCTCGAAATCTGGCTCTTCAACAGAGAGACGTATTT
CACCAGTTCCACAAAGGGCGCGGCGAAATTCATCACCTCCAGTCCTACCGAAAGAAGTAG
CATCAAAGACACCACCAGTCAGGAAAAGCTCACCGAAACCATCACCTGCACCTGCATCTG
TGCCTACTACACGTAGTTCATGGTCAGGTGGTTCTTTGACTAAAGCAACTACAACACAAA
AAACTAAAAGGTCTCCTGGGATGGCTTCAACGTCCACACAAACTAGCCGAAGGACTCCAA
CAACGCCCTCGTCGTCTCAGCCAGCTTCAAAAGCGGAAAGGGCCATTCAATCAGTGAAGA
ACAAGAAGGAAACCATTACTGCTACCAAGCCAGCTATAAAGGGACAAGAAGAGAAGAAGA
CCAAAACAGCAACAAAGACAAGCAGAATAACTAAAGTTTCACCTTCAGAAGAAAAATCAG
GTGTAAAAACGAAGCAAAGCTTGCAAAAGGTTTCAAATAAAAGCAGTGTTGTACCTCTTG
AGTCCAAAACCTTGAAGAAAACCACTGGAATTAGTCAGAGCATTAGGTCTGGTATGGTGA
AGAATAAGGTACCCCAACCTAATGACTTCTCAAAAGATACCGGAAGTGTTAACCAAGCTG
AAGATAAGGAGCAATCTCCTGTGACAACCGAGCCAACTACTAAGGTACTGGAGGCTGATC
TTGCTCAACCAGCACATGATGTTGATGAAAATTTAGAAATTTCGCTCGATAATGACTTGA
ATATTGAAAAAACAGAGAAACCGGCCTCGAGTTTAACTGCAACAGAAATGGGCTCCAGTA
TCCAAGTTGAACCCTCTACGGATGAGTTAGATGAGGCCATACAACCTCCTGACGATGACA
TGGGCATCTCATCATCTGCGTGGGTAGAAGTAGAGCGTCAAGAACTAGAAGTCACTGTTT
CGAGTGAAAATGTAGTTGTTGAGGATGTAACTTCTCCAGGAATTGCACCATTGCCGTCAT
CAAGCCCAAGAGTGCGTCATTCGTTGTCACAAATGCTGCAAGCAGATAGCAATGAACCAG
AAATTATTGAGTGGGGAAATGCTGAAAACCCACCCGCAATAGTTTTTCATAAGGATTCTC
CAAAAGGATTCAAGAGGCTTCTAAAGTTTGCTCGAAAAAACAAGGGAGACAACAATGCTA
ACGGCTGGGCAAGCCCCTCGGTAGTTTCAGAAGGAGAAGATGAACTAGAAGAACCAAGAG
GCACTAGTGATGGTACAAATTCAAGCAGGAGAACTTTTGATGGTTCAAAGACTAATAGCA
TCTTATCAGCTCAATCAACTACCGGCAGCTTCAACTCTTTGAACTCGGATAAGCTACGGG
AGAGATCAGGTGCTGCCACATCAACAAGAGCATCAAGGTCGTTCTTCTCACTCTCAAACT
TCCGGAGCAGCAGGTCAAATGAGTCGAAGCTTCGATAGTGTCTGCCTTGTTTGTCCAGCA
GATACATGGGTAGTTCATCTCCGCTCCCATTCAGGACGTCTAGACTTAAAAATGGTTTGA
GATTTGATTGTTCGGACGGAGCCAGCTTGCTGTGTTTCGCTCTAGTCACCTGACATTTGA
TATATAGATAGCTTCTGCCTATGAGATGCCATACTTCGCTTCTGCCGTCCTGTACATTTC
TATATTTTACTGCATTGGGTGCGAGCTGATTGAGACGACCGATATGTTTGCATGGCTTGC
AAGAGATTTGCTTCGACCAAAAGCCCTTTGCTGTCAATAGTTTGTACCGAAAATTGTCAT
GAGCAACAACATTAGGAATGATGTAAGTTGTCACATTTTTTTTTGACGAGAGGAGGACCC
CATT