Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d047526_T006
CDS Infomation

cds chromosome:B73_RefGen_v4:9:133629163:133634028:-1 gene:Zm00001d047526 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lung seven transmembrane receptor family protein
Sequence

ATGCGGCGAGCCACACTCTCGCTCGCGCTCGGGCTCTCCCTCATCGCCCTCCTCGCTGCC
CGGGGCGCCGACGCCTCAATCCACGAGTACGCCGGCGGCGGCTTCGCGCCGCGGGCCAAC
TCCTTCTTCTTCCACGGCGGGAGCGAGGGTCTCTACGCATCCGACCTCTTATCCAACTCC
TCATCCTTCATCAGGTTTGACTCCATTGTATTTCGTCGCACCCTGGAGTCAGCGTCTAGG
CATGAGGAGATGCAGCAAAAGACAGGATTGGTGGAGGCTATAATTGTTGAGATACAGGAC
AGGGACAAAATTGGAGGTTCATATCTACACTCTGATGCAATATGCTGCACGCCTGAGCTT
GATAAAGAGAAATCTTGTAGAGTAGGAGAGGTGATCATACGTCCAAATCCTGAGAACCCT
GACTGGCCTAAGAGGATCCAGACATTCTTTGATGGTAAAAATGAAGAAACCACTATGGTA
ACTCAAATTGTATCAATAAACAAAACAGGGATGTATTACCTCTATTTTATGTTCTGTGAT
CCTCAACTTAAGGGATTGAAGGTTACAGGAAGAACTGTTTGGAGAAATCCACAGGGTTAC
CTCCCTGGTAAAATGGCTCCAATGATGACATTTTATGGTGTCATGTCACTTGCATATCTT
GCACTTGGACTTCTATGGTTCATTCAGTTCGTGCGATGCTGGAAGGACATTTTGCAGCTG
CATTACCATATAACAACTGTTATTGCTCTTGGCATGTGTGAAATGGCTTTCTGGTATTTT
GAGTATGCTAACTTTAATTCAACTGGAACCAGACCTATAGGCATTACCTTGTGGGCAGTT
ACGTTTACAGCTGTGAAGAAGACTGTTTCTCGTTTTCTTCTATTAGTAGTTTCGATGGGC
TATGGTGTTGTTCTACCCACATTGGGTGGCATAACATCAAGAGTTGCTGCTCTTGGTTTC
ATATATTTTGTTGCTTCAGAAGCTCTTGAACTAGTTGAAAATCTGGGAAATATCAATGAC
TTCTCTGGAAAGACAAGGCTATTCCTAGTGCTGCCTGTTGCTGTACTTGATGCTACCTTT
ATCATCTGGATATTTTCATCCCTCTCTAGAACTTTGGAGAAGCTGCAGCTGCGGAGAAGC
ATGGCAAAACTTGAATTATATCGGAAGTTTACAAATTCTCTGGCTGTGTCAGTGCTTATC
TCAATCGCTTGGATTGGCTATGAGCTATATTTCAATGCAACTGACCCATTGAGTGAACTT
TGGCAACGGGCTTGGATCATCCCCTCCTTTTGGAATGTGCTTTCATATGCCCTCCTCGTG
ATCATATGCATCCTTTGGTCACCATCTCGCAATCCAACAGGGTGGTTGCTTTTAGCAATA
GCACAAGCATATATTCTGAAACAGATTTACAATCATATTCTTTACAATATTCATAATGAA
TTTTGCTGTAAAGCAACTTCTATGATCCTTGAAGATGTTCCCTGTTCAACTATATATTAA

Peptide Sequence

PEP ID

Zm00001d047526_P006
PEP Infomation

pep chromosome:B73_RefGen_v4:9:133629163:133634028:-1 gene:Zm00001d047526 transcript:Zm00001d047526_T006 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lung seven transmembrane receptor family protein
Sequence

MRRATLSLALGLSLIALLAARGADASIHEYAGGGFAPRANSFFFHGGSEGLYASDLLSNS
SSFIRFDSIVFRRTLESASRHEEMQQKTGLVEAIIVEIQDRDKIGGSYLHSDAICCTPEL
DKEKSCRVGEVIIRPNPENPDWPKRIQTFFDGKNEETTMVTQIVSINKTGMYYLYFMFCD
PQLKGLKVTGRTVWRNPQGYLPGKMAPMMTFYGVMSLAYLALGLLWFIQFVRCWKDILQL
HYHITTVIALGMCEMAFWYFEYANFNSTGTRPIGITLWAVTFTAVKKTVSRFLLLVVSMG
YGVVLPTLGGITSRVAALGFIYFVASEALELVENLGNINDFSGKTRLFLVLPVAVLDATF
IIWIFSSLSRTLEKLQLRRSMAKLELYRKFTNSLAVSVLISIAWIGYELYFNATDPLSEL
WQRAWIIPSFWNVLSYALLVIICILWSPSRNPTGWLLLAIAQAYILKQIYNHILYNIHNE
FCCKATSMILEDVPCSTIY

Transcript Sequence

Transcript ID

Zm00001d047526_T006
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:133629163:133634028:-1 gene:Zm00001d047526 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lung seven transmembrane receptor family protein
Sequence

GAGCCCCCTCTCCTTCCGGTTCCACTTCCATCCATCCGCTGCCGCCGACTAGCAGACGGC
TACGGCGGCGCCCGCACGCACCCTCGCGACGATGCGGCGAGCCACACTCTCGCTCGCGCT
CGGGCTCTCCCTCATCGCCCTCCTCGCTGCCCGGGGCGCCGACGCCTCAATCCACGAGTA
CGCCGGCGGCGGCTTCGCGCCGCGGGCCAACTCCTTCTTCTTCCACGGCGGGAGCGAGGG
TCTCTACGCATCCGACCTCTTATCCAACTCCTCATCCTTCATCAGGTTTGACTCCATTGT
ATTTCGTCGCACCCTGGAGTCAGCGTCTAGGCATGAGGAGATGCAGCAAAAGACAGGATT
GGTGGAGGCTATAATTGTTGAGATACAGGACAGGGACAAAATTGGAGGTTCATATCTACA
CTCTGATGCAATATGCTGCACGCCTGAGCTTGATAAAGAGAAATCTTGTAGAGTAGGAGA
GGTGATCATACGTCCAAATCCTGAGAACCCTGACTGGCCTAAGAGGATCCAGACATTCTT
TGATGGTAAAAATGAAGAAACCACTATGGTAACTCAAATTGTATCAATAAACAAAACAGG
GATGTATTACCTCTATTTTATGTTCTGTGATCCTCAACTTAAGGGATTGAAGGTTACAGG
AAGAACTGTTTGGAGAAATCCACAGGGTTACCTCCCTGGTAAAATGGCTCCAATGATGAC
ATTTTATGGTGTCATGTCACTTGCATATCTTGCACTTGGACTTCTATGGTTCATTCAGTT
CGTGCGATGCTGGAAGGACATTTTGCAGCTGCATTACCATATAACAACTGTTATTGCTCT
TGGCATGTGTGAAATGGCTTTCTGGTATTTTGAGTATGCTAACTTTAATTCAACTGGAAC
CAGACCTATAGGCATTACCTTGTGGGCAGTTACGTTTACAGCTGTGAAGAAGACTGTTTC
TCGTTTTCTTCTATTAGTAGTTTCGATGGGCTATGGTGTTGTTCTACCCACATTGGGTGG
CATAACATCAAGAGTTGCTGCTCTTGGTTTCATATATTTTGTTGCTTCAGAAGCTCTTGA
ACTAGTTGAAAATCTGGGAAATATCAATGACTTCTCTGGAAAGACAAGGCTATTCCTAGT
GCTGCCTGTTGCTGTACTTGATGCTACCTTTATCATCTGGATATTTTCATCCCTCTCTAG
AACTTTGGAGAAGCTGCAGCTGCGGAGAAGCATGGCAAAACTTGAATTATATCGGAAGTT
TACAAATTCTCTGGCTGTGTCAGTGCTTATCTCAATCGCTTGGATTGGCTATGAGCTATA
TTTCAATGCAACTGACCCATTGAGTGAACTTTGGCAACGGGCTTGGATCATCCCCTCCTT
TTGGAATGTGCTTTCATATGCCCTCCTCGTGATCATATGCATCCTTTGGTCACCATCTCG
CAATCCAACAGGGTGGTTGCTTTTAGCAATAGCACAAGCATATATTCTGAAACAGATTTA
CAATCATATTCTTTACAATATTCATAATGAATTTTGCTGTAAAGCAACTTCTATGATCCT
TGAAGATGTTCCCTGTTCAACTATATATTAATCCATTTAATCTTCGGAGATGAATATTTC
ATGTTGAGAATTAATTTCAGTTTGCCTATTCAGAGGATGCAGGTGAGGGAGCTGATGAGG
AAGGGCTCTCTCTAGTAGGCAGTGCAGTGAAAGGAACTGGGGATATGGTAAACATGCATA
TCTTTCCGGAGGATAAGCGTGCATGATAAATTTTGGTCTGAATTCAGCTGTACTCCTGGC
AGAATGCTATGTGAAGTACCCTTTTCCTCTGGATTCACGACTAGCTGACATCTTCTAAAG
CAGTAAAGCTTGCGTAAGATTCCAGATGTACAGTTGGTGACTTGTGTTGAACGATTTGAC
CAAGAGATTTTTACTTGTCCAGTTGTGACTACTCAAATACAAGGTCGGCACAATAAACTG
TCACTTTGAGAGCATAAGAGATTAGTCTTCATAATCCTTGTGATGGTGATGTAACTCGTA
GGCGGTTGTATGTATCATTACCGGAGCTGAAATGTATCGTGGATCTAATGATTTATTTGC
GATTGATTATGCACT