Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d047483_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:9:131741799:131744323:1 gene:Zm00001d047483 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative phototropic-resoponsive NPH3 family protein
Sequence	ATGCTGCGCTGCGCCGCGCACTACCTGCAGATCACCGACGACTTCTCCGACAAGAGCCTG GAGCTCCGCGCCGAGGCCTTCCTCCGCGACGCGGTGCTCCCCAGCATCGCCAGCTCCGTC GCCGTGCTCCGCAGCTGCGAGGCGCTGCTCCCGGCCGCCGAGGACGTCGGCCTCGTGCCC CGCCTCATCGCCGCCGTCGCCACCAACGTGTGCAAGGAGCAGCTCACCTCGGGGCTGTCC AAGCTGGACCAGTGCGCGCAGCTCAAGCCCGCGGCGGCGTTCGCCGACCTCGACCCGCCG GCCGACTGGTGGGGCAAGTCCGTGGCCGCGCTCGGCCTCGACTTCTTCCAGCGGCTGCTC TCCGCGGTCAAGGCCAAGGGGCTCAAGCAGGAGACGGTCACCAGGATCCTCATCAACTAC GCGCAGAACGCGCTGCACGGGCTCATGGCCAGGGACGTGCACAGATGCGGCGGCGCGGAC GCCGACGCCGTCAAGAAGCAGCGCGCCGTCGTGGAGGCCATCGTGGGCCTTCTCCCGGCG CAGTCCAGGAAGAGCCCCGTGCCCATGGCCTTCCTCTCGGGGCTCCTCAAGACGTCGATG GCGGTGTCCGCGTCCAGCATCTGCAGGGCCGACCTGGAGAAGCGGATCGGCATGCAGATG GACCAGGCCATCCTGGAGGACATCCTCATCGCCGCGGGCGCCGCCGTGGGCGCGCCGGCC GGTCAGCAGCACGCGCTGTACGACACGGACGTGGTGGCGCGCATCTTCTCGGTGTTCCTC AACCTCGACGACGACCATAACGAGGAGGACGACGGGTTCGACTACGACAGCCCGCGCTCG CCGAAGCAGAGCCTCCTGGTGAAGGCCGCCAAGCTGCTGGACAGCTACCTCGCGGAGGTG GCGCTCGACTCTAACATCCTCCCGTCCAAGTTCATCTCCCTCGCCGAGCTGCTCCCGGAC CACGCTCGCGTCGTCACCGATGGCCTCTACCGCGCCGTCGACATCTTCCTCAAGGTGCAC CCCAACATCAAGGAGGCGGAGCGGTACCGGCTGTGCAAGGCGATCGACTGCCAGCGGCTG ACGCCGGACGCGTGCAGCCACGCGGCGCAGAACGAGCGGCTCCCGGTGCAGATGGCGGTG CAGGTGCTCTACTTCGAGCAGCTGCGGCTGCGGAGCGCGATCCAGGCCGGGGGTGGCAGC AGCATGGGCGGGCACGACGGGGCGGTCTTCTTCGGGTGCGCCGCGGCCGCCGCGTCGGTG CAGGGCAGCGTGAACATGCGCTCCGGCAGCGGCGTGGGCAGCGGCGCCATGTCGCCGCGG GACAACTACGCGTCGGTGCGGCGGGAGAACCGGGAGCTGAAGCTGGAGGTGGCGCGGATG CGGATGCGGCTCACGGACCTGGAGAAGGACCACGTGAGCATGAAGCGGGAGCTGGTGCGC GTCGGCCCCGCCAACCGCCTGCTCCGGGGCTTGGCGCGCAGCCTCGGCAGGCTCTTCCGC ATGCGCCCCGCCGCCGAGCCGGGGCTGCAGCAGCTCGGGGCCAAGGCTACCGCCGACGCC AAGGTGCTCTTCCAGCGCCGCCGCCGCCACTCCATCTCATGA

Peptide Sequence

PEP ID	Zm00001d047483_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:9:131741799:131744323:1 gene:Zm00001d047483 transcript:Zm00001d047483_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative phototropic-resoponsive NPH3 family protein
Sequence	MLRCAAHYLQITDDFSDKSLELRAEAFLRDAVLPSIASSVAVLRSCEALLPAAEDVGLVP RLIAAVATNVCKEQLTSGLSKLDQCAQLKPAAAFADLDPPADWWGKSVAALGLDFFQRLL SAVKAKGLKQETVTRILINYAQNALHGLMARDVHRCGGADADAVKKQRAVVEAIVGLLPA QSRKSPVPMAFLSGLLKTSMAVSASSICRADLEKRIGMQMDQAILEDILIAAGAAVGAPA GQQHALYDTDVVARIFSVFLNLDDDHNEEDDGFDYDSPRSPKQSLLVKAAKLLDSYLAEV ALDSNILPSKFISLAELLPDHARVVTDGLYRAVDIFLKVHPNIKEAERYRLCKAIDCQRL TPDACSHAAQNERLPVQMAVQVLYFEQLRLRSAIQAGGGSSMGGHDGAVFFGCAAAAASV QGSVNMRSGSGVGSGAMSPRDNYASVRRENRELKLEVARMRMRLTDLEKDHVSMKRELVR VGPANRLLRGLARSLGRLFRMRPAAEPGLQQLGAKATADAKVLFQRRRRHSIS

Transcript Sequence

Transcript ID	Zm00001d047483_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:131741799:131744323:1 gene:Zm00001d047483 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative phototropic-resoponsive NPH3 family protein
Sequence	GCCACGCCAATGAGTGGTAACTCACTCGCGTTCCTGCTTCGTTCCTCGGATCCTGTGCTC CTCTCCTGAACTCGACTCTGCGTTCTGCCAGGCCTCCGACCGACGTCTCCAGCGACCTCA CCGTCGAGGTCGGCACCTCCAGCTTCGCACTCCACAAGTTCCCGCTGGTCTCCCGGAGCG GCAAGATCCGGCGCCTCGTCGCGGAGGCCAAGGACGCCAAGCTGGCGCGGCTCAGCCTGC ACGGCACCCCGGGGGGCGCGCCGGCGTTCGAGCTCGCCGCCAAGTTCTGCTACGGCGTCC ACGTGGACGTCACGGTCGCCAACGTCGCCATGCTGCGCTGCGCCGCGCACTACCTGCAGA TCACCGACGACTTCTCCGACAAGAGCCTGGAGCTCCGCGCCGAGGCCTTCCTCCGCGACG CGGTGCTCCCCAGCATCGCCAGCTCCGTCGCCGTGCTCCGCAGCTGCGAGGCGCTGCTCC CGGCCGCCGAGGACGTCGGCCTCGTGCCCCGCCTCATCGCCGCCGTCGCCACCAACGTGT GCAAGGAGCAGCTCACCTCGGGGCTGTCCAAGCTGGACCAGTGCGCGCAGCTCAAGCCCG CGGCGGCGTTCGCCGACCTCGACCCGCCGGCCGACTGGTGGGGCAAGTCCGTGGCCGCGC TCGGCCTCGACTTCTTCCAGCGGCTGCTCTCCGCGGTCAAGGCCAAGGGGCTCAAGCAGG AGACGGTCACCAGGATCCTCATCAACTACGCGCAGAACGCGCTGCACGGGCTCATGGCCA GGGACGTGCACAGATGCGGCGGCGCGGACGCCGACGCCGTCAAGAAGCAGCGCGCCGTCG TGGAGGCCATCGTGGGCCTTCTCCCGGCGCAGTCCAGGAAGAGCCCCGTGCCCATGGCCT TCCTCTCGGGGCTCCTCAAGACGTCGATGGCGGTGTCCGCGTCCAGCATCTGCAGGGCCG ACCTGGAGAAGCGGATCGGCATGCAGATGGACCAGGCCATCCTGGAGGACATCCTCATCG CCGCGGGCGCCGCCGTGGGCGCGCCGGCCGGTCAGCAGCACGCGCTGTACGACACGGACG TGGTGGCGCGCATCTTCTCGGTGTTCCTCAACCTCGACGACGACCATAACGAGGAGGACG ACGGGTTCGACTACGACAGCCCGCGCTCGCCGAAGCAGAGCCTCCTGGTGAAGGCCGCCA AGCTGCTGGACAGCTACCTCGCGGAGGTGGCGCTCGACTCTAACATCCTCCCGTCCAAGT TCATCTCCCTCGCCGAGCTGCTCCCGGACCACGCTCGCGTCGTCACCGATGGCCTCTACC GCGCCGTCGACATCTTCCTCAAGGTGCACCCCAACATCAAGGAGGCGGAGCGGTACCGGC TGTGCAAGGCGATCGACTGCCAGCGGCTGACGCCGGACGCGTGCAGCCACGCGGCGCAGA ACGAGCGGCTCCCGGTGCAGATGGCGGTGCAGGTGCTCTACTTCGAGCAGCTGCGGCTGC GGAGCGCGATCCAGGCCGGGGGTGGCAGCAGCATGGGCGGGCACGACGGGGCGGTCTTCT TCGGGTGCGCCGCGGCCGCCGCGTCGGTGCAGGGCAGCGTGAACATGCGCTCCGGCAGCG GCGTGGGCAGCGGCGCCATGTCGCCGCGGGACAACTACGCGTCGGTGCGGCGGGAGAACC GGGAGCTGAAGCTGGAGGTGGCGCGGATGCGGATGCGGCTCACGGACCTGGAGAAGGACC ACGTGAGCATGAAGCGGGAGCTGGTGCGCGTCGGCCCCGCCAACCGCCTGCTCCGGGGCT TGGCGCGCAGCCTCGGCAGGCTCTTCCGCATGCGCCCCGCCGCCGAGCCGGGGCTGCAGC AGCTCGGGGCCAAGGCTACCGCCGACGCCAAGGTGCTCTTCCAGCGCCGCCGCCGCCACT CCATCTCATGATCTCGGTTCCTCGAATCGGAGAGGCGACCGGCGGGCACGCTGCCGATCG AGCGTGCTCGCGAGGATGAGTGGCCACGCTACTGTACGTGCGTACAGCAAAGTTTCGCGT GTGCAATTGTGCATAGCATACAAGAAAGGAAGACATGGTTTGAGTGAGTGCACACTGCAG GTTTATTTCTTCCCGGATTTCGTGCGGTGCGGGCATCGCGTGGTCTTCTGCTCATGAAAG TCATGGCGTTCGACACAGCATGCGATGCGATTCATGTATATGGATGGATGGACTATGGAA AGGTTTCGAGGGGTGTATGTATCTTTGGGACCAGTGGACACATGGTTCCTCCTGTTTTCT CTGTAGTTTCCG