Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d047482_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:9:131693047:131697968:1 gene:Zm00001d047482 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGCTGCGTGCACGGCCGCCCCCCCGCGTCCAGCCCCGACCACCCACCGCAGCTGCCC
GAGCCGCCGGCTCCCGCGGCGACGCAGGAGGCCGCCGGGAAGGCCGAGCAGCCGGCGGCG
CCAGCTGAGAAGCCGGCTTGGCGGGAGAGGCGCTCCCGCTCGTCGCGCAATGCCCCCGCC
CCTAGCTTCGCCAACAGGGCGCGCGGGGAGCAGGTCGCCGCCGGCTGGCCCGCCTGGCTC
TCCGCCGTCGCCGGCGAGGCCATTGACGGATGGACCCCGCGCCGCGCCGACTCCTTCGAG
AAGATTGACAAGATCGGCCAGGGCACGTACAGCAACGTGTACAAGGCGCGCGACACGGTG
AGCGGCAAGATCGTGGCGCTCAAGAAGGTGCGCTTCGACAACCTCGAGCCCGAGAGCGTC
CGCTTCATGGCCCGCGAGATCCTCATCCTCCGACGCCTCGACCACCCTAACGTCGTCAAA
CTCGACGGCCTTGTCACCTCCCGCATGTCCTGCAGCCTCTACCTCGTCTTCGAGTACATG
GAGCACGACCTCGCTGGCCTCGCCGCCAGTCCCGAAATTAAGTTCACCGAACCACAGGTT
AAGTGCTATATGCATCAGCTGCTGTCGGGTCTGGAGCACTGCCACGACCGGGGGGTGCTG
CACCGCGACATCAAGGGCTCGAATCTGCTCCTGGACAACAATGGCATGCTGAAGATTGCA
GATTTTGGTCTCGCGTCGTTCTTCGACCCAGACCGTAAACAGCCGATGACGAGCCGGGTG
GTGACCCTATGGTACCGCCCACCCGAACTGCTTCTCGGCGCAACGGATTACGGGGTGGGT
GTGGACCTGTGGAGTGCAGGGTGTATCCTGGCCGAGTTGCTCGCTGGGAGGCCAATTATG
CCAGGACGAACAGAGGTGGAACAGCTACATAAAATTTTTAAGTTGTGTGGCTCCCCAACA
GAAGAATATTGGAAAAAGTCGAAGCTACCTCATGCTACAATATTTAAGCCTCAGCAGCCG
TACAGAAAGCGAATAAGAGAGACGTTTAAGGATTTTCCACAATCAGCACTGCAGTTGATC
GAGACACTACTTGCAATTGATCCAGCAGATCGCTTAACAGCGTCTTCTGCATTAAGAAGT
GATTTCTTTACAACCGAACCTTTTGCATGCGAACCGTCAAGTCTTCCAAAATATCCTCCA
AGCAAAGAGATAGATGTGAAACGAAGAGACGAAGAAGCCAGACGTTTAAGAGCTGCTGGT
GGTAGAGCTAATGGTGATGGAGCCAAGAAGACGAGAACACGTGATCGACCTAAGGCAGTT
CCAGCTCCAGAGGCAAATGCTGAACTTCAAGTAAATATTGATAAAAGAAGGTTTATTACT
CATGCAAATGCTAAGAGCAAGAGCGAAAAGTTCCCTCCCCCACATCAAGATGGTGCGGTT
GGTGTCCCCTTGGATGCTTCAAATCATATGGATCCACTATACGAACCTCCGGACCCATCT
TCCTTCAGCACTGTGTTCACTTACGAGAAAGGCGCTGTGCCTACTTGGTCTGGACCATTG
GTTGATCCTGCTGCAGTGGTGAACCAAAAGGGCAAGCACAAGTCCGGGCGCTCATCGAAA
CAGCCGGCCACTGCCCGTGCTCGGTAA

Peptide Sequence

PEP ID

Zm00001d047482_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:9:131693047:131697968:1 gene:Zm00001d047482 transcript:Zm00001d047482_T001 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGCVHGRPPASSPDHPPQLPEPPAPAATQEAAGKAEQPAAPAEKPAWRERRSRSSRNAPA
PSFANRARGEQVAAGWPAWLSAVAGEAIDGWTPRRADSFEKIDKIGQGTYSNVYKARDTV
SGKIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLDGLVTSRMSCSLYLVFEYM
EHDLAGLAASPEIKFTEPQVKCYMHQLLSGLEHCHDRGVLHRDIKGSNLLLDNNGMLKIA
DFGLASFFDPDRKQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGRPIM
PGRTEVEQLHKIFKLCGSPTEEYWKKSKLPHATIFKPQQPYRKRIRETFKDFPQSALQLI
ETLLAIDPADRLTASSALRSDFFTTEPFACEPSSLPKYPPSKEIDVKRRDEEARRLRAAG
GRANGDGAKKTRTRDRPKAVPAPEANAELQVNIDKRRFITHANAKSKSEKFPPPHQDGAV
GVPLDASNHMDPLYEPPDPSSFSTVFTYEKGAVPTWSGPLVDPAAVVNQKGKHKSGRSSK
QPATARAR

Transcript Sequence

Transcript ID

Zm00001d047482_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:131693047:131697968:1 gene:Zm00001d047482 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CGTACTCTCGTCGGTCCCCTCTCCGGTCCACACTCCCTCGCGCCCGCTCCACTCCACTTC
CCTTCCCCAGTCGGCCAGTCCCCATCCCCACCCCCAGCCCCATGAGCCGCCGCCGGTGAC
CAGCAACATCCCATGGGCTGCGTGCACGGCCGCCCCCCCGCGTCCAGCCCCGACCACCCA
CCGCAGCTGCCCGAGCCGCCGGCTCCCGCGGCGACGCAGGAGGCCGCCGGGAAGGCCGAG
CAGCCGGCGGCGCCAGCTGAGAAGCCGGCTTGGCGGGAGAGGCGCTCCCGCTCGTCGCGC
AATGCCCCCGCCCCTAGCTTCGCCAACAGGGCGCGCGGGGAGCAGGTCGCCGCCGGCTGG
CCCGCCTGGCTCTCCGCCGTCGCCGGCGAGGCCATTGACGGATGGACCCCGCGCCGCGCC
GACTCCTTCGAGAAGATTGACAAGATCGGCCAGGGCACGTACAGCAACGTGTACAAGGCG
CGCGACACGGTGAGCGGCAAGATCGTGGCGCTCAAGAAGGTGCGCTTCGACAACCTCGAG
CCCGAGAGCGTCCGCTTCATGGCCCGCGAGATCCTCATCCTCCGACGCCTCGACCACCCT
AACGTCGTCAAACTCGACGGCCTTGTCACCTCCCGCATGTCCTGCAGCCTCTACCTCGTC
TTCGAGTACATGGAGCACGACCTCGCTGGCCTCGCCGCCAGTCCCGAAATTAAGTTCACC
GAACCACAGGTTAAGTGCTATATGCATCAGCTGCTGTCGGGTCTGGAGCACTGCCACGAC
CGGGGGGTGCTGCACCGCGACATCAAGGGCTCGAATCTGCTCCTGGACAACAATGGCATG
CTGAAGATTGCAGATTTTGGTCTCGCGTCGTTCTTCGACCCAGACCGTAAACAGCCGATG
ACGAGCCGGGTGGTGACCCTATGGTACCGCCCACCCGAACTGCTTCTCGGCGCAACGGAT
TACGGGGTGGGTGTGGACCTGTGGAGTGCAGGGTGTATCCTGGCCGAGTTGCTCGCTGGG
AGGCCAATTATGCCAGGACGAACAGAGGTGGAACAGCTACATAAAATTTTTAAGTTGTGT
GGCTCCCCAACAGAAGAATATTGGAAAAAGTCGAAGCTACCTCATGCTACAATATTTAAG
CCTCAGCAGCCGTACAGAAAGCGAATAAGAGAGACGTTTAAGGATTTTCCACAATCAGCA
CTGCAGTTGATCGAGACACTACTTGCAATTGATCCAGCAGATCGCTTAACAGCGTCTTCT
GCATTAAGAAGTGATTTCTTTACAACCGAACCTTTTGCATGCGAACCGTCAAGTCTTCCA
AAATATCCTCCAAGCAAAGAGATAGATGTGAAACGAAGAGACGAAGAAGCCAGACGTTTA
AGAGCTGCTGGTGGTAGAGCTAATGGTGATGGAGCCAAGAAGACGAGAACACGTGATCGA
CCTAAGGCAGTTCCAGCTCCAGAGGCAAATGCTGAACTTCAAGTAAATATTGATAAAAGA
AGGTTTATTACTCATGCAAATGCTAAGAGCAAGAGCGAAAAGTTCCCTCCCCCACATCAA
GATGGTGCGGTTGGTGTCCCCTTGGATGCTTCAAATCATATGGATCCACTATACGAACCT
CCGGACCCATCTTCCTTCAGCACTGTGTTCACTTACGAGAAAGGCGCTGTGCCTACTTGG
TCTGGACCATTGGTTGATCCTGCTGCAGTGGTGAACCAAAAGGGCAAGCACAAGTCCGGG
CGCTCATCGAAACAGCCGGCCACTGCCCGTGCTCGGTAAGATCCTAAGGATCGATATTTA
CAGGTAAAAAATAAGGAGACTTCAACATGGTGGGAAAATACTCCATGGCGGCACCTGCAC
GCTGTTTTGCAAACGAGGCATGCAATGATAAAGTAGTTTGTTGGTTACCTGTTGTCATGT
GAGTGATTTTTTTTTCTAGACTTCGTGTATAGGCTGGGGAGGGAGTTGAAGTAGTTACTT
CTGTACATTAGGTTTTCTTTCCTGCTCTTTAAGCAGCTGGTGATGTTAGATTCATTTGAA
TGGAAGCTTAGATCTCTAGTGTTCCCGCCACTACACCCCCTTCCATTGTAACAGTGTGTT
CCCTGCATAATCAGTTCTTATCAATTCAATTGAAATCGTAAGTTTTGGTG