Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d047472_T005
CDS Infomation	cds chromosome:B73_RefGen_v4:9:131248698:131250809:1 gene:Zm00001d047472 gene_biotype:protein_coding transcript_biotype:protein_coding description:homolog of nucleolar protein NOP56
Sequence	ATGACCGATGAGTTGAGGAGCTTCCTGGAGCTGAACCTGCCGAAGCCTAAGGAGGGGAAG AAGGCCAAATACAGCCTCGGCGTTGTCGAGCCCAAGGTCGGCTCCCACATCTCCGAGGTC ACCGGCATCCCCTGTCAGAGCAACGAGTTCGTCCAGGAGCTGCTCCGCGGTGTCCGCCTC CACTTCGACCGTTTCATCAACGAGCTTAAGGATTCTGACTTGGAGAAGGCCCAACTTGGC CTGGGGCATAGCTACAGCAGGGCTAAGGTGAAGTTCAATGTGAATCGTGTTGATAACATG GTGATCCAAGCAATATTTCTGCTGGATACACTTGACAAGGACATCAATTCCTTCTCCATG AGAGTCAGGGAATGGTTCTCATGGCACTTCCCTGAGCTTGTCAAGATTGTGAATGACAAT TACCTTTATGCCAAGCTTGCTAAGTTTATTGTGAACAAATCTGATTTGGCGGAAAAAGAT ATCCCAGCTTTGGCTGATATAGTTGGTGATGAGGACAAGGCTAAAGAAATTGTTGAAGCA GCAAAGGCTTCAATGGGCCAGGATCTGTCACCAGTTGATTTGATCAATGTCCAGCAATTT GCCCAAAGGGTTATGAATCTCTCTGAGTATCGCAAAAACCTTTATGAATATCTCGTGACT AAGATGAATGATATTGCGCCCAACCTGACATCATTGATTGGTGAAGTAGTTGGAGCTCGC CTAATCTCTCATGCTGGCAGTCTTTCAAACCTTGCCAAGTGTGCAGCTTCCACCCTTCAA ATACTTGGTGCTGAGAAGGCCCTATTCAGAGCACTGAAAACTCGAGGGAATACTCCAAAG TATGGGCTTATATTCCACTCCTCCTTTATTGGCCGTGCTTCAACCAAGAACAAGGGCAGA ATGGCTCGTTACCTGGCAAACAAATGCTCGATTGCTTCACGCATTGACTGCTACTCGGAG GCTAGTACCTCTGTCTTTGGGCAAAAGTTGCGCGAGCAAGTCGAGGAGAGACTGGAATTC TATGACAAGGGTGTTGCGCCTCGTAAAAATCTTGATGTGATGAAAGCTGCTATTGACAGT ATGGTCAATGACACCTTAATGGATGATGATGATAATGAGAAGGCGGACACATCTGCCAAG AAAAGCAAGAAAAAGAAG

Peptide Sequence

PEP ID	Zm00001d047472_P005
PEP Infomation	pep chromosome:B73_RefGen_v4:9:131248698:131250809:1 gene:Zm00001d047472 transcript:Zm00001d047472_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:homolog of nucleolar protein NOP56
Sequence	MTDELRSFLELNLPKPKEGKKAKYSLGVVEPKVGSHISEVTGIPCQSNEFVQELLRGVRL HFDRFINELKDSDLEKAQLGLGHSYSRAKVKFNVNRVDNMVIQAIFLLDTLDKDINSFSM RVREWFSWHFPELVKIVNDNYLYAKLAKFIVNKSDLAEKDIPALADIVGDEDKAKEIVEA AKASMGQDLSPVDLINVQQFAQRVMNLSEYRKNLYEYLVTKMNDIAPNLTSLIGEVVGAR LISHAGSLSNLAKCAASTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASTKNKGR MARYLANKCSIASRIDCYSEASTSVFGQKLREQVEERLEFYDKGVAPRKNLDVMKAAIDS MVNDTLMDDDDNEKADTSAKKSKKKK

Transcript Sequence

Transcript ID	Zm00001d047472_T005
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:131248698:131250809:1 gene:Zm00001d047472 gene_biotype:protein_coding transcript_biotype:protein_coding description:homolog of nucleolar protein NOP56
Sequence	AGGAATCATGACCGATGAGTTGAGGAGCTTCCTGGAGCTGAACCTGCCGAAGCCTAAGGA GGGGAAGAAGGCCAAATACAGCCTCGGCGTTGTCGAGCCCAAGGTCGGCTCCCACATCTC CGAGGTCACCGGCATCCCCTGTCAGAGCAACGAGTTCGTCCAGGAGCTGCTCCGCGGTGT CCGCCTCCACTTCGACCGTTTCATCAACGAGCTTAAGGATTCTGACTTGGAGAAGGCCCA ACTTGGCCTGGGGCATAGCTACAGCAGGGCTAAGGTGAAGTTCAATGTGAATCGTGTTGA TAACATGGTGATCCAAGCAATATTTCTGCTGGATACACTTGACAAGGACATCAATTCCTT CTCCATGAGAGTCAGGGAATGGTTCTCATGGCACTTCCCTGAGCTTGTCAAGATTGTGAA TGACAATTACCTTTATGCCAAGCTTGCTAAGTTTATTGTGAACAAATCTGATTTGGCGGA AAAAGATATCCCAGCTTTGGCTGATATAGTTGGTGATGAGGACAAGGCTAAAGAAATTGT TGAAGCAGCAAAGGCTTCAATGGGCCAGGATCTGTCACCAGTTGATTTGATCAATGTCCA GCAATTTGCCCAAAGGGTTATGAATCTCTCTGAGTATCGCAAAAACCTTTATGAATATCT CGTGACTAAGATGAATGATATTGCGCCCAACCTGACATCATTGATTGGTGAAGTAGTTGG AGCTCGCCTAATCTCTCATGCTGGCAGTCTTTCAAACCTTGCCAAGTGTGCAGCTTCCAC CCTTCAAATACTTGGTGCTGAGAAGGCCCTATTCAGAGCACTGAAAACTCGAGGGAATAC TCCAAAGTATGGGCTTATATTCCACTCCTCCTTTATTGGCCGTGCTTCAACCAAGAACAA GGGCAGAATGGCTCGTTACCTGGCAAACAAATGCTCGATTGCTTCACGCATTGACTGCTA CTCGGAGGCTAGTACCTCTGTCTTTGGGCAAAAGTTGCGCGAGCAAGTCGAGGAGAGACT GGAATTCTATGACAAGGGTGTTGCGCCTCGTAAAAATCTTGATGTGATGAAAGCTGCTAT TGACAGTATGGTCAATGACACCTTAATGGATGATGATGATAATGAGAAGGCGGACACATC TGCCAAGAAAAGCAAGAAAAAGAAG