Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d047472_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:9:131248332:131251561:1 gene:Zm00001d047472 gene_biotype:protein_coding transcript_biotype:protein_coding description:homolog of nucleolar protein NOP56
Sequence	ATGGCGTTGTACCTGCTGTTCGAGTCGGCCTCCGGCTACGGCCTATTCCATGCGTACGGT ATCGATGAGATCGGGCAGAGCGTTGAGGCCGTGCGCTCCTCCGTGCTGGACCTCGACCGC TTCGGCAAGGCCGTCAAGCTCACTGCCTTCAATCCTTTCTCCTCTGCCGTCGACGCGCTC AACCAGTGCAACGCTATCTCTGAAGGAATCATGACCGATGAGTTGAGGAGCTTCCTGGAG CTGAACCTGCCGAAGCCTAAGGAGGGGAAGAAGGCCAAATACAGCCTCGGCGTTGTCGAG CCCAAGGTCGGCTCCCACATCTCCGAGGTCACCGGCATCCCCTGTCAGAGCAACGAGTTC GTCCAGGAGCTGCTCCGCGGTGTCCGCCTCCACTTCGACCGTTTCATCAACGAGCTTAAG GATTCTGACTTGGAGAAGGCCCAACTTGGCCTGGGGCATAGCTACAGCAGGGCTAAGGTG AAGTTCAATGTGAATCGTGTTGATAACATGGTGATCCAAGCAATATTTCTGCTGGATACA CTTGACAAGGACATCAATTCCTTCTCCATGAGAGTCAGGGAATGGTTCTCATGGCACTTC CCTGAGCTTGTCAAGATTGTGAATGACAATTACCTTTATGCCAAGCTTGCTAAGTTTATT GTGAACAAATCTGATTTGGCGGAAAAAGATATCCCAGCTTTGGCTGATATAGTTGGTGAT GAGGACAAGGCTAAAGAAATTGTTGAAGCAGCAAAGGCTTCAATGGGCCAGGATCTGTCA CCAGTTGATTTGATCAATGTCCAGCAATTTGCCCAAAGGGTTATGAATCTCTCTGAGTAT CGCAAAAACCTTTATGAATATCTCGTGACTAAGATGAATGATATTGCGCCCAACCTGACA TCATTGATTGGTGAAGTAGTTGGAGCTCGCCTAATCTCTCATGCTGGCAGTCTTTCAAAC CTTGCCAAGTGTGCAGCTTCCACCCTTCAAATACTTGGTGCTGAGAAGGCCCTATTCAGA GCACTGAAAACTCGAGGGAATACTCCAAAGTATGGGCTTATATTCCACTCCTCCTTTATT GGCCGTGCTTCAACCAAGAACAAGGGCAGAATGGCTCGTTACCTGGCAAACAAATGCTCG ATTGCTTCACGCATTGACTGCTACTCGGAGGCTAGTACCTCTGTCTTTGGGCAAAAGTTG CGCGAGCAAGTCGAGGAGAGACTGGAATTCTATGACAAGGGTGTTGCGCCTCGTAAAAAT CTTGATGTGATGAAAGCTGCTATTGACAGTATGGTCAATGACACCTTAATGGATGATGAT GGTAAGGCAGATAATGAGAAGGCGGACACATCTGCCAAGAAAAGCAAGAAAAAGAAGACC AAAACCGAGACTGATGGTGATGCAATGGATGTGGATAAGCCCTCCAACGTGGCTGATGGA GAAGCTGAGCTTGGAACCGAGAAGAAGAAAAAGAAAAAGAAGCACAAGCTAGAGGAGGCA CAGGAGGAGAACGGTGCAGCACATGCTAATGGCGACGCTGAAGAGACCCAGACTCCCAAG AAGAAGAAAAAGAAGAGCCGTGAAATTTCGGAGGAAGCTGAACCTAAGACAGCCACTGAG GGGAAGAAGAAGAAAAATGAAGAAGCTGAACCTAAGACAGCCACCGAGGGGAAGAAGAAG AAAAAGAAGGCAGTCAAGGCTGATGAATGA

Peptide Sequence

PEP ID	Zm00001d047472_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:9:131248332:131251561:1 gene:Zm00001d047472 transcript:Zm00001d047472_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:homolog of nucleolar protein NOP56
Sequence	MALYLLFESASGYGLFHAYGIDEIGQSVEAVRSSVLDLDRFGKAVKLTAFNPFSSAVDAL NQCNAISEGIMTDELRSFLELNLPKPKEGKKAKYSLGVVEPKVGSHISEVTGIPCQSNEF VQELLRGVRLHFDRFINELKDSDLEKAQLGLGHSYSRAKVKFNVNRVDNMVIQAIFLLDT LDKDINSFSMRVREWFSWHFPELVKIVNDNYLYAKLAKFIVNKSDLAEKDIPALADIVGD EDKAKEIVEAAKASMGQDLSPVDLINVQQFAQRVMNLSEYRKNLYEYLVTKMNDIAPNLT SLIGEVVGARLISHAGSLSNLAKCAASTLQILGAEKALFRALKTRGNTPKYGLIFHSSFI GRASTKNKGRMARYLANKCSIASRIDCYSEASTSVFGQKLREQVEERLEFYDKGVAPRKN LDVMKAAIDSMVNDTLMDDDGKADNEKADTSAKKSKKKKTKTETDGDAMDVDKPSNVADG EAELGTEKKKKKKKHKLEEAQEENGAAHANGDAEETQTPKKKKKKSREISEEAEPKTATE GKKKKNEEAEPKTATEGKKKKKKAVKADE

Transcript Sequence

Transcript ID	Zm00001d047472_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:131248332:131251561:1 gene:Zm00001d047472 gene_biotype:protein_coding transcript_biotype:protein_coding description:homolog of nucleolar protein NOP56
Sequence	ACCGTCACTCTTGTTGATCCTAAAACCCTAACCCCTAGCCAGCGCTCCGCCGCCATCCGC CGGCGAGATGGCGTTGTACCTGCTGTTCGAGTCGGCCTCCGGCTACGGCCTATTCCATGC GTACGGTATCGATGAGATCGGGCAGAGCGTTGAGGCCGTGCGCTCCTCCGTGCTGGACCT CGACCGCTTCGGCAAGGCCGTCAAGCTCACTGCCTTCAATCCTTTCTCCTCTGCCGTCGA CGCGCTCAACCAGTGCAACGCTATCTCTGAAGGAATCATGACCGATGAGTTGAGGAGCTT CCTGGAGCTGAACCTGCCGAAGCCTAAGGAGGGGAAGAAGGCCAAATACAGCCTCGGCGT TGTCGAGCCCAAGGTCGGCTCCCACATCTCCGAGGTCACCGGCATCCCCTGTCAGAGCAA CGAGTTCGTCCAGGAGCTGCTCCGCGGTGTCCGCCTCCACTTCGACCGTTTCATCAACGA GCTTAAGGATTCTGACTTGGAGAAGGCCCAACTTGGCCTGGGGCATAGCTACAGCAGGGC TAAGGTGAAGTTCAATGTGAATCGTGTTGATAACATGGTGATCCAAGCAATATTTCTGCT GGATACACTTGACAAGGACATCAATTCCTTCTCCATGAGAGTCAGGGAATGGTTCTCATG GCACTTCCCTGAGCTTGTCAAGATTGTGAATGACAATTACCTTTATGCCAAGCTTGCTAA GTTTATTGTGAACAAATCTGATTTGGCGGAAAAAGATATCCCAGCTTTGGCTGATATAGT TGGTGATGAGGACAAGGCTAAAGAAATTGTTGAAGCAGCAAAGGCTTCAATGGGCCAGGA TCTGTCACCAGTTGATTTGATCAATGTCCAGCAATTTGCCCAAAGGGTTATGAATCTCTC TGAGTATCGCAAAAACCTTTATGAATATCTCGTGACTAAGATGAATGATATTGCGCCCAA CCTGACATCATTGATTGGTGAAGTAGTTGGAGCTCGCCTAATCTCTCATGCTGGCAGTCT TTCAAACCTTGCCAAGTGTGCAGCTTCCACCCTTCAAATACTTGGTGCTGAGAAGGCCCT ATTCAGAGCACTGAAAACTCGAGGGAATACTCCAAAGTATGGGCTTATATTCCACTCCTC CTTTATTGGCCGTGCTTCAACCAAGAACAAGGGCAGAATGGCTCGTTACCTGGCAAACAA ATGCTCGATTGCTTCACGCATTGACTGCTACTCGGAGGCTAGTACCTCTGTCTTTGGGCA AAAGTTGCGCGAGCAAGTCGAGGAGAGACTGGAATTCTATGACAAGGGTGTTGCGCCTCG TAAAAATCTTGATGTGATGAAAGCTGCTATTGACAGTATGGTCAATGACACCTTAATGGA TGATGATGGTAAGGCAGATAATGAGAAGGCGGACACATCTGCCAAGAAAAGCAAGAAAAA GAAGACCAAAACCGAGACTGATGGTGATGCAATGGATGTGGATAAGCCCTCCAACGTGGC TGATGGAGAAGCTGAGCTTGGAACCGAGAAGAAGAAAAAGAAAAAGAAGCACAAGCTAGA GGAGGCACAGGAGGAGAACGGTGCAGCACATGCTAATGGCGACGCTGAAGAGACCCAGAC TCCCAAGAAGAAGAAAAAGAAGAGCCGTGAAATTTCGGAGGAAGCTGAACCTAAGACAGC CACTGAGGGGAAGAAGAAGAAAAATGAAGAAGCTGAACCTAAGACAGCCACCGAGGGGAA GAAGAAGAAAAAGAAGGCAGTCAAGGCTGATGAATGACAAGCTATTTGTTGTATGTCAGT ACAAATCCTAGTATTTGTTGAAAACCGAGATAAGCACCTAGCTTCTAGTTCATGAGGTGT ACGATGCAATTCAATTCAACTATGAAGTTCTGCAATCCAACTCAACTACGAAGTTCTATC GTCTCTAGCTTGATTGTAATTTTTTTATGAGGGTGCGGTTGGATAAGCAAATAGCTTGGT GAGTTGGCGTTCGATTGTTATATTGAGTGAGAACTGAGATTTGAAGGCATCTTCGAGACA CTTTTTTGAAGGCAGTCAAGGCTGATGAATGACAAGCTATTTGTTGTATGTCAGTACAAA TCCTAGTATTTGTTGAAAACCGAGATAAGCACCTAGCTTCTAGTTCATGAGGTGTACGAT GCAATTCAATTCAACTATGAAGTTCTGCAATCCAAC