Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d047466_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:9:130966631:130969941:1 gene:Zm00001d047466 gene_biotype:protein_coding transcript_biotype:protein_coding description:R3H domain protein
Sequence

ATGGCCACCACTCAGTTCGCCATGGTTGAGGAGCTGGCCTCGCTCATCAAGGACAACCTG
CACAGCAAGCATCTCATCCTCTCCACCGAGGAGTCCCTCGTCGCAGCCCTCCAGGAGCTG
CACTGCCGTGAAGAGGACGACGGCGCGGCGGATACGATAGAGCTCCAGCCTGCCGGGGCC
TACCACCGCCTTCTCTTGCATCGCCTTGCTGAAATTTATGGGTTCGCGCATGAATCGGCC
GGTGAAGGCGAGGATCGACATTTGGTCCTCCAGCGCTGCCCCGAAACAGCCATCCCATCT
GTTCTTGTTAGTGATATGATATGGAAGTTTGATAACAGCGATGATTTCATGTCTGTTGTG
CTAACCCGAAATGATACAGATTTTCAAAAACCTCAGAAGGCAGATATTGTCCAAAAAGAC
ATTTCTGTTAAAAGCTCGCGTCTGAAAGACAATACAGACTCGAAACCTCTGAGGCAGCCA
GCAGTACATCCTGCAGCATCATTAAAGGAGAGGGAAGCTGCTTATCGAGCTGCTCGTGAG
CGGATCTTCTCTGTGGATGATGCCAAGGGAAACGATAGGTCATACGTGAAATGTCGGCAG
GTTCCTGTTGTTGCTCAACGGATGATTGCCCATGCACTCGGTCAAAAGGTTCAAAATACC
ACAGAGGCAGTTGCCTCCACAGAAAGCAGAGGAAAACATAAACAGCTGCCAAATGGGAAA
AGTATTCCGACACATAGCAGGAACAACTTCTGCCCAGTTACACCAGATAACAAAGAAGCG
GTTCGAAATGGTAGGCCAAACTCAGCTGGTTGTAACTCGTATCAAACTCCATCAAGCCAA
AGACGCCACACAACTAATACTAGAGCTGTTACTGCTGAAGGCTTGAAGAAAGAACAGACT
GGAGCAGCTAAAAGAATGTTTGCACATGCACTGGGTCTGTCTGCAGCTCGAGGAAGTAAT
GGTGCGCTGCCCAAACCGAAGTAA

Peptide Sequence

PEP ID

Zm00001d047466_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:9:130966631:130969941:1 gene:Zm00001d047466 transcript:Zm00001d047466_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:R3H domain protein
Sequence

MATTQFAMVEELASLIKDNLHSKHLILSTEESLVAALQELHCREEDDGAADTIELQPAGA
YHRLLLHRLAEIYGFAHESAGEGEDRHLVLQRCPETAIPSVLVSDMIWKFDNSDDFMSVV
LTRNDTDFQKPQKADIVQKDISVKSSRLKDNTDSKPLRQPAVHPAASLKEREAAYRAARE
RIFSVDDAKGNDRSYVKCRQVPVVAQRMIAHALGQKVQNTTEAVASTESRGKHKQLPNGK
SIPTHSRNNFCPVTPDNKEAVRNGRPNSAGCNSYQTPSSQRRHTTNTRAVTAEGLKKEQT
GAAKRMFAHALGLSAARGSNGALPKPK

Transcript Sequence

Transcript ID

Zm00001d047466_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:130966631:130969941:1 gene:Zm00001d047466 gene_biotype:protein_coding transcript_biotype:protein_coding description:R3H domain protein
Sequence

TGGCTTTACCCTATGATGCTAATCCATGTTGGTGCAGGTGGGTAGACAAGAACACAGATG
GATCAATCAGCGTCTGGAGCGACGCGGCTGTGCGCCTGGCCCTCCGTCGCGGTCTGTTAC
CTATATCTCCGCAAAGGCACATGGATAAATTTTTTCAAGGCTGAAGCAGTTATTAGTTGC
AATCTCCAGCATAACAAATTCGCGAATCCGACTCTCGAGCGTACCTACCATGGATCCAAA
AATCTTAGGGATACCCATGGCCTAAACTTGTTGCTGAATCCCCGCTGCCTCCACGGCGTC
CATGCCCTAGCTATTTGATGCTTGCTTCAGCCCAGGGTTTTCCTCCGAATCCCCCTTCTC
CAGCCTCAGCTCCCCTCTCCAATCGCAGTTGCAGTTGCGGCTGGGCTAGGCTTTCGTCAG
CAGCACTTTCCTCCCCTCGGCTCTTGACAGATCGAACTGCTTCCATCAGCAATTCAATCG
GGAGATGGCCACCACTCAGTTCGCCATGGTTGAGGAGCTGGCCTCGCTCATCAAGGACAA
CCTGCACAGCAAGCATCTCATCCTCTCCACCGAGGAGTCCCTCGTCGCAGCCCTCCAGGA
GCTGCACTGCCGTGAAGAGGACGACGGCGCGGCGGATACGATAGAGCTCCAGCCTGCCGG
GGCCTACCACCGCCTTCTCTTGCATCGCCTTGCTGAAATTTATGGGTTCGCGCATGAATC
GGCCGGTGAAGGCGAGGATCGACATTTGGTCCTCCAGCGCTGCCCCGAAACAGCCATCCC
ATCTGTTCTTGTTAGTGATATGATATGGAAGTTTGATAACAGCGATGATTTCATGTCTGT
TGTGCTAACCCGAAATGATACAGATTTTCAAAAACCTCAGAAGGCAGATATTGTCCAAAA
AGACATTTCTGTTAAAAGCTCGCGTCTGAAAGACAATACAGACTCGAAACCTCTGAGGCA
GCCAGCAGTACATCCTGCAGCATCATTAAAGGAGAGGGAAGCTGCTTATCGAGCTGCTCG
TGAGCGGATCTTCTCTGTGGATGATGCCAAGGGAAACGATAGGTCATACGTGAAATGTCG
GCAGGTTCCTGTTGTTGCTCAACGGATGATTGCCCATGCACTCGGTCAAAAGGTTCAAAA
TACCACAGAGGCAGTTGCCTCCACAGAAAGCAGAGGAAAACATAAACAGCTGCCAAATGG
GAAAAGTATTCCGACACATAGCAGGAACAACTTCTGCCCAGTTACACCAGATAACAAAGA
AGCGGTTCGAAATGGTAGGCCAAACTCAGCTGGTTGTAACTCGTATCAAACTCCATCAAG
CCAAAGACGCCACACAACTAATACTAGAGCTGTTACTGCTGAAGGCTTGAAGAAAGAACA
GACTGGAGCAGCTAAAAGAATGTTTGCACATGCACTGGGTCTGTCTGCAGCTCGAGGAAG
TAATGGTGCGCTGCCCAAACCGAAGTAAAGATGTGGATTTGAGAACGGGTAAGTGGAGAA
GGTTGCCCAGTGCAAGCTCAAGCTCCTGCCGTGGGATGAACCTGCAACGGTTGGTGCTCT
TCTGTGCCATCTACTACTGTGGAGCGATTTTTGTGGTGCTGTAGGAGATGAAAGCGGTTA
TTGGTTGGATGTTAATTGTTGGACTTGGACCCAGAGAGGATATGTGGCCCGGCGCTGGTT
CGAAAATTCAAGCTCAGATGGGGAAAGATGTTGCTGGATACGCATTACATGCCAAGCCAA
GTGGAAGAGAAACGCCCCTCCTGTCACTCGTATGGTAATATCGCTCTAAGGTTGCTGCAA
TTTGTTTACTCTAGTACGTTATTTAGAGAGGCACATCCTGTGCCGTTACTTTTTTCCTTT
GACTATACTTATATAAGGACGACTTGCTGGATTTGTGGTCTTGATTTAATTTGTACTCTT
AGGGCTTGTTTAGCAGCAAGTGTAATGGACGAAATTGAGAAGTTTAAAATCTCTTACTAT
TT