Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d047464_T027
CDS Infomation

cds chromosome:B73_RefGen_v4:9:130959510:130962055:1 gene:Zm00001d047464 gene_biotype:protein_coding transcript_biotype:protein_coding description:Beta-adaptin-like protein C
Sequence

ATGATTTGGATAATTGGAGAATATGCCGAAAGAATTGACAATGCTGATGAACTTCTTGAG
AGTTTCTTGGAAACATTTCCTGAAGAACCAGCATTAGTTCAACTGCAGCTGCTAACCGCT
ACTGTTAAATTGTTTCTTAAGAAGCCAACTGAGGGGCCACAACAGATGATACAGGCTGTT
CTCAATAATGCCACAGTTGAAACAGATAATCCTGATTTGAGGGACAGAGCTTATATATAC
TGGCGACTTCTGTCTACTGATCCTGAGGCTGCGAAAGATGTAGTTTTGGCAGAGAAACCT
GTGATCAGTGATGACTCCAACCAGCTTGACTCATCACTTCTTGATGAGCTGCTAGCAAAC
ATTTCTACCCTTTCATCAGTTTATCATAAGCCCCCAGAATCATTTGTCAGCCGTGTCAAG
GCAGCTCCTAGGGCTGATGATGATGAGTTTGCTGATACAGCTGAAACAGGGTATTCGGAG
TCCCCATCCCAGGGAGTTGATGGGGCGTCGCCTTCCTCTAGTGCTGGTACTTCTTCTAAT
GTACCCGTGAAACAGCCGGCGGCAGCATCCCCACCTGGTCCAGTGGTAATGCCAGACCTT
TTAGGTGATTTAATGGGTATGGATAATGCTATTGTCCCTGTTGATGAACCTGCAGCACCT
TCTGGCCCTCCGCTACCTGTCTTACTGCCTTCGAATACAGGTCAAGGGCTGCAGATTAGT
GCACAACTAACACGGCGTGATGGCCAGATATACTATGATATATCTTTCGAGAATGGCACC
CAGGGTGTCCTAGATGGATTTATGATTCAGTTTAACAAGAACACATTTGGTCTTGCTGCT
GGTGAAGCACTTCAGGTTACTCCACTGCAACCAGGCCAATCAACAAGGACACTTTTACAA
ATGAACACGTTCCAGAATATCAGCCCTGGTGCACCAAACTCGCTATTACAAGTTGCTGTG
AAAAATAATCAGCAGCCAGTGTGGTACTTCAATGACAAAATTCCACTGCATGTTTTCTTT
GGTGAAGATGGAAAAATGGAACGAGCTAGTTTTCTTGAGGCCTGGAAATCTTTACCTGAT
GACAATGAATTTACAAAAGAATTCCCGGGCTCTGTAATCAGCAGTATAGATGCTACAGTT
GAGCGCCTTGCAGCATCAAATGTGTTCTTTATAGCCAAGCGGAAAAATGCAAACATGGAT
GTTCTGTATCTGTCCGCGAAGATGCCCCGCGGAATCCCCTTTCTTATAGAGGTTACAGCT
GCGGTTGGTGTTCCTGGTGTGAAATGTGCAGTCAAAACTCCAAATAGAGAGATGGTTCCT
CTCTTCTTTGAAGCTATGGAGGCTCTCACCAAGTGA

Peptide Sequence

PEP ID

Zm00001d047464_P027
PEP Infomation

pep chromosome:B73_RefGen_v4:9:130959510:130962055:1 gene:Zm00001d047464 transcript:Zm00001d047464_T027 gene_biotype:protein_coding transcript_biotype:protein_coding description:Beta-adaptin-like protein C
Sequence

MIWIIGEYAERIDNADELLESFLETFPEEPALVQLQLLTATVKLFLKKPTEGPQQMIQAV
LNNATVETDNPDLRDRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDSSLLDELLAN
ISTLSSVYHKPPESFVSRVKAAPRADDDEFADTAETGYSESPSQGVDGASPSSSAGTSSN
VPVKQPAAASPPGPVVMPDLLGDLMGMDNAIVPVDEPAAPSGPPLPVLLPSNTGQGLQIS
AQLTRRDGQIYYDISFENGTQGVLDGFMIQFNKNTFGLAAGEALQVTPLQPGQSTRTLLQ
MNTFQNISPGAPNSLLQVAVKNNQQPVWYFNDKIPLHVFFGEDGKMERASFLEAWKSLPD
DNEFTKEFPGSVISSIDATVERLAASNVFFIAKRKNANMDVLYLSAKMPRGIPFLIEVTA
AVGVPGVKCAVKTPNREMVPLFFEAMEALTK

Transcript Sequence

Transcript ID

Zm00001d047464_T027
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:130959510:130962055:1 gene:Zm00001d047464 gene_biotype:protein_coding transcript_biotype:protein_coding description:Beta-adaptin-like protein C
Sequence

GGCATCCATGATTTGGATAATTGGAGAATATGCCGAAAGAATTGACAATGCTGATGAACT
TCTTGAGAGTTTCTTGGAAACATTTCCTGAAGAACCAGCATTAGTTCAACTGCAGCTGCT
AACCGCTACTGTTAAATTGTTTCTTAAGAAGCCAACTGAGGGGCCACAACAGATGATACA
GGCTGTTCTCAATAATGCCACAGTTGAAACAGATAATCCTGATTTGAGGGACAGAGCTTA
TATATACTGGCGACTTCTGTCTACTGATCCTGAGGCTGCGAAAGATGTAGTTTTGGCAGA
GAAACCTGTGATCAGTGATGACTCCAACCAGCTTGACTCATCACTTCTTGATGAGCTGCT
AGCAAACATTTCTACCCTTTCATCAGTTTATCATAAGCCCCCAGAATCATTTGTCAGCCG
TGTCAAGGCAGCTCCTAGGGCTGATGATGATGAGTTTGCTGATACAGCTGAAACAGGGTA
TTCGGAGTCCCCATCCCAGGGAGTTGATGGGGCGTCGCCTTCCTCTAGTGCTGGTACTTC
TTCTAATGTACCCGTGAAACAGCCGGCGGCAGCATCCCCACCTGGTCCAGTGGTAATGCC
AGACCTTTTAGGTGATTTAATGGGTATGGATAATGCTATTGTCCCTGTTGATGAACCTGC
AGCACCTTCTGGCCCTCCGCTACCTGTCTTACTGCCTTCGAATACAGGTCAAGGGCTGCA
GATTAGTGCACAACTAACACGGCGTGATGGCCAGATATACTATGATATATCTTTCGAGAA
TGGCACCCAGGGTGTCCTAGATGGATTTATGATTCAGTTTAACAAGAACACATTTGGTCT
TGCTGCTGGTGAAGCACTTCAGGTTACTCCACTGCAACCAGGCCAATCAACAAGGACACT
TTTACAAATGAACACGTTCCAGAATATCAGCCCTGGTGCACCAAACTCGCTATTACAAGT
TGCTGTGAAAAATAATCAGCAGCCAGTGTGGTACTTCAATGACAAAATTCCACTGCATGT
TTTCTTTGGTGAAGATGGAAAAATGGAACGAGCTAGTTTTCTTGAGGCCTGGAAATCTTT
ACCTGATGACAATGAATTTACAAAAGAATTCCCGGGCTCTGTAATCAGCAGTATAGATGC
TACAGTTGAGCGCCTTGCAGCATCAAATGTGTTCTTTATAGCCAAGCGGAAAAATGCAAA
CATGGATGTTCTGTATCTGTCCGCGAAGATGCCCCGCGGAATCCCCTTTCTTATAGAGGT
TACAGCTGCGGTTGGTGTTCCTGGTGTGAAATGTGCAGTCAAAACTCCAAATAGAGAGAT
GGTTCCTCTCTTCTTTGAAGCTATGGAGGCTCTCACCAAGTGACGCCAAAGTTAATGGAT
ATGTGGTTCTACAAAAATTTATCAGTCGATGAGCTGCTATAGGTGTTTGGATGCGGCATT
TTTTTTTTCACGGAAGCTTGTGTGAATTGTAGTTTTTGTATTAGATTACAGTATTTAAAC
TGATAGTTCCTGGTTCCAAAGTTTTTCGCCAGAAATACTGGAGATGTTCTTGCCTCACAT
AATCTGTACATCTTACCCTGTTGGACCTGGAAATTTTCATCTTGTTATGCATAGCATATG
AAATATGACTAGTTTTCTACACGGCTAATGTAAACTGATACTACCTCCGTTGACAA