Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d047418_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:9:129484138:129488183:-1 gene:Zm00001d047418 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cytochrome P450 709B2
Sequence

ATGGCCTTCCCTGCTGTGCCCCTCCTCGCCGCTCTGCTCCTGGTCGCCGCCACGCGGCTG
TGGGACTACGTCTTCGTGCGCCTCGTATGGCGGCCGTACGCCATCACCAAGGGGTTCAGA
GAGCAAGGGATCCATGGACCCTCCTACAGGTTCTTCAAGGGCTGCAACGAGGAGATCAGG
AGCATGAAGGAGAAGACCGACGGTCTCGTGCTGGACGTCGGCGACCACAAGTACCTCCCG
CGGATCGCGCCGCACTACCTCGAATGGAGGGCTCAGTACGGAGAACCATTTCTATATTGG
TACGGGGCACAAGCCCGAATTTGCATATTTGACTACGAACTAGCAAGGCAAATCCTTTCG
AGCAAGTCTGGGCATTTCGTGAAGAACGATGCGCACCCTACTTTGTTGGCTCTGGTCGGC
AAGGGACTCGGGTTCATGGAAGGCTCTGACTGGGTGCGCCATCGCAGGGTGATCAACCCT
GCTTTCACCATTGACAAGCTTAAGATTGTGACCGAGACGATGCTGGACTTCGCCGATAGC
ATGGCAGGTGAGTTGGAAGCTGAAGCATCCCAGAACGAGAACGGAGAAACACAAGTGGAT
ATATACAAACATTTCAGCGATCTGACAGTTGACAATATCGCCTACGCCATCTTTGGAAGC
AGCTACAAGTTAGGCAAACAAGTGTTCGAGGCACAAACTGAGCTGCTGGGGATCACCATG
GCTACTTTCCTTGACGTGCCCATACCAGGATCCAAATACCTTCCAACCCAAGCGAATCGG
CGAAAATGGATGCTGGAGACGAAGCTCAAGAGCTTACTCACGCGGATCATACAGCCACGG
TTAGCAAGCGGTGAGCACGGAAACGATCTGCTGGGCGTGATGCTGGACTCCTGCACTGAG
ACCAAGCAAGGAGGGAAGCAGCAGCAAGTGGATCGTCTGCGTCTCAGCTTGAGCATGGAG
GAGATCATACACGAGTGCAAGCTGTTCTTCTTCGCTGGCCACGAGAACACAGCCCTTCTC
CTCACGTGGTCCGTGTATTTGCTCAGCATATACCCCGAGTGGCAAGAAAGGCTCCGGAAG
GAGGTCTTGAGGGAGTTCGGGAGGGACGCTCCTAACCCCAACGCGCTCAACAGATTGAAA
GAGATGACAATGGTGTTGTTCGAGACCTTGAGGCTCTACTCGCCTGCTCTCTTCATGCAA
AGGAAGACCCTGGCCGACATGACCGTGGGGCCAATAAAACTGCCCAAAGGCACTGCAATT
GTGATACCCATTCCGATCATGCATCGAGACAAGCAGGCATGGGGCGACGACGCAGACGAG
TTCAGTCCGATGAGATTTGCGAATGGGATCACGGGAGCAGCGAAAGTTCCTCACGGCCTG
CTGGCGTTCTCGATGGGGCCAAGGTCTTGCATCGGCCAGAACTTGTCGATGCTGGAAGCC
AAGTCGACGCTGGCCCTGATGCTCCGCAAGTTCTCCTTCGCTCTCTCCCCTGACTACGTG
CACGCGCCCGTGGATCTCTTCACTCTCAAACCTAAGTTTGGCCTTCCCGTCATTCTGAGG
CCACTGGATAATGTTTTGATTTGA

Peptide Sequence

PEP ID

Zm00001d047418_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:9:129484138:129488183:-1 gene:Zm00001d047418 transcript:Zm00001d047418_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cytochrome P450 709B2
Sequence

MAFPAVPLLAALLLVAATRLWDYVFVRLVWRPYAITKGFREQGIHGPSYRFFKGCNEEIR
SMKEKTDGLVLDVGDHKYLPRIAPHYLEWRAQYGEPFLYWYGAQARICIFDYELARQILS
SKSGHFVKNDAHPTLLALVGKGLGFMEGSDWVRHRRVINPAFTIDKLKIVTETMLDFADS
MAGELEAEASQNENGETQVDIYKHFSDLTVDNIAYAIFGSSYKLGKQVFEAQTELLGITM
ATFLDVPIPGSKYLPTQANRRKWMLETKLKSLLTRIIQPRLASGEHGNDLLGVMLDSCTE
TKQGGKQQQVDRLRLSLSMEEIIHECKLFFFAGHENTALLLTWSVYLLSIYPEWQERLRK
EVLREFGRDAPNPNALNRLKEMTMVLFETLRLYSPALFMQRKTLADMTVGPIKLPKGTAI
VIPIPIMHRDKQAWGDDADEFSPMRFANGITGAAKVPHGLLAFSMGPRSCIGQNLSMLEA
KSTLALMLRKFSFALSPDYVHAPVDLFTLKPKFGLPVILRPLDNVLI

Transcript Sequence

Transcript ID

Zm00001d047418_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:129484138:129488183:-1 gene:Zm00001d047418 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cytochrome P450 709B2
Sequence

AATTCACTCCTTTCTTCTTCTCCTGCATCAGGATCATCATCAGGTTCTCCGTTCCACTCC
ATGGCCTTCCCTGCTGTGCCCCTCCTCGCCGCTCTGCTCCTGGTCGCCGCCACGCGGCTG
TGGGACTACGTCTTCGTGCGCCTCGTATGGCGGCCGTACGCCATCACCAAGGGGTTCAGA
GAGCAAGGGATCCATGGACCCTCCTACAGGTTCTTCAAGGGCTGCAACGAGGAGATCAGG
AGCATGAAGGAGAAGACCGACGGTCTCGTGCTGGACGTCGGCGACCACAAGTACCTCCCG
CGGATCGCGCCGCACTACCTCGAATGGAGGGCTCAGTACGGAGAACCATTTCTATATTGG
TACGGGGCACAAGCCCGAATTTGCATATTTGACTACGAACTAGCAAGGCAAATCCTTTCG
AGCAAGTCTGGGCATTTCGTGAAGAACGATGCGCACCCTACTTTGTTGGCTCTGGTCGGC
AAGGGACTCGGGTTCATGGAAGGCTCTGACTGGGTGCGCCATCGCAGGGTGATCAACCCT
GCTTTCACCATTGACAAGCTTAAGATTGTGACCGAGACGATGCTGGACTTCGCCGATAGC
ATGGCAGGTGAGTTGGAAGCTGAAGCATCCCAGAACGAGAACGGAGAAACACAAGTGGAT
ATATACAAACATTTCAGCGATCTGACAGTTGACAATATCGCCTACGCCATCTTTGGAAGC
AGCTACAAGTTAGGCAAACAAGTGTTCGAGGCACAAACTGAGCTGCTGGGGATCACCATG
GCTACTTTCCTTGACGTGCCCATACCAGGATCCAAATACCTTCCAACCCAAGCGAATCGG
CGAAAATGGATGCTGGAGACGAAGCTCAAGAGCTTACTCACGCGGATCATACAGCCACGG
TTAGCAAGCGGTGAGCACGGAAACGATCTGCTGGGCGTGATGCTGGACTCCTGCACTGAG
ACCAAGCAAGGAGGGAAGCAGCAGCAAGTGGATCGTCTGCGTCTCAGCTTGAGCATGGAG
GAGATCATACACGAGTGCAAGCTGTTCTTCTTCGCTGGCCACGAGAACACAGCCCTTCTC
CTCACGTGGTCCGTGTATTTGCTCAGCATATACCCCGAGTGGCAAGAAAGGCTCCGGAAG
GAGGTCTTGAGGGAGTTCGGGAGGGACGCTCCTAACCCCAACGCGCTCAACAGATTGAAA
GAGATGACAATGGTGTTGTTCGAGACCTTGAGGCTCTACTCGCCTGCTCTCTTCATGCAA
AGGAAGACCCTGGCCGACATGACCGTGGGGCCAATAAAACTGCCCAAAGGCACTGCAATT
GTGATACCCATTCCGATCATGCATCGAGACAAGCAGGCATGGGGCGACGACGCAGACGAG
TTCAGTCCGATGAGATTTGCGAATGGGATCACGGGAGCAGCGAAAGTTCCTCACGGCCTG
CTGGCGTTCTCGATGGGGCCAAGGTCTTGCATCGGCCAGAACTTGTCGATGCTGGAAGCC
AAGTCGACGCTGGCCCTGATGCTCCGCAAGTTCTCCTTCGCTCTCTCCCCTGACTACGTG
CACGCGCCCGTGGATCTCTTCACTCTCAAACCTAAGTTTGGCCTTCCCGTCATTCTGAGG
CCACTGGATAATGTTTTGATTTGAGTTGGGCATATAGTACAACAGGAAGTAACTTAGGTA
CATATCAAATTTGCTAGCTGGTCAAAACGTTATATGATGTTC