Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d047417_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:9:129473610:129475921:-1 gene:Zm00001d047417 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative cytochrome P450 superfamily protein

Sequence

ATGGGGGCCGACCAGTGGCCGTGGCCGTGGCCGTGGGCGACGCCGCCGCCGCCGGCCCTG
CTGCTTCTGGCCTCACTACTGCCGGCGCTGCTGCTCGCGCTGTGGCGCCTGGTGTGGCAA
CCGCGGGCCGTGGCGCGGTCGTTCGCGAGGCAGGGCATCCGGGGGCCGCCCTACTGTTTC
CTGGCCGGATCCTTGTCGGAGGCGAAGCGGCTGGCGCGTGCCAGCCGGAGAAGGGTTCCG
CAGCTGGACGTCGCTTCACATGACATCATGCCCATCTTGCTGCCACCGTTCCACCGATGG
GTCGTCGAGTATGGGAGGACATTCCTGTACTGGATCGGGCCAACACCTGCAATCTTCTCC
GTTGATTTAGAGTTGATTAAGGAAGTGCTCACAGACAGGACGGGCCTGTTTGGCAAGGAC
TTCATGATCCCCGTTTTCAAAGTCCTGTTGGGCAACGGGCTCATCTTAGCAAACGGCGAC
GACTGGAAACGGCACAGGAAAGTTGTCCTTCCAGCCTTCAACCACGAGAGGATCAAGAGC
ATGTCGGCAGTGACGGCGGAAGCTACGGAACAGATGGCACAGCGATGGTGCGAGCAGCTA
ATACTGCACAGTGGTGCCCGTCAAGCAGCGGAAATACAAGTGGACCGCGCCATCTGCGAC
CTGACTGCCGAAATCATCGGCCGCGCCGCTTTCGGCACCAGCCTCCAGGAAGCCGGTGAG
GTCCTCCTCCTGATGCACGAGATGCAGAAGATGGGCGCCGCGGCCATGGTGGATGCTCCC
ATACTCTGGTATCTGCCGACGCGGCGCAACCTAACGGTGCGACGTCTGGACAAGCTGTTG
AGGGCCAAGATCACTGCGATGATGGCAGCGCGGGTGGCCGCCAATTGCGGCGGTGGCTAC
GGCGACGACCTGCTCGGCCTCCTGCTGGAGGCGTGGTCGCCGGAGCCTGGGCGGCGCCAT
GCTGGGAGCGACGACGAAGGGACGACGACGACGACGCTGACCACCGGAGAGGTGATCGAC
GAGTGCAAGACCTTCTTCGGCGCCGGGCAGGAGACCACCGCCACCCTCCTCGTGTGGACC
ATGTTCCTGCTGAGCACGCACCCGCAGTGGCAGGACAAGGTCAGGGAGGAGGTCCTCCGC
GAATTCCGCGGCGACGTCCCCACCACCGACACCCTCTCCAGACTGAAGCTGCTTCACATG
GTTCTGCTGGAGACACTGAGGCTCTACCCGCCGATCGTGTACATACAACGGAGGACTGCC
TCAGACGTCGTGCTCAGGGGCATGCTGCAGGTGCCCGAGGGGACCGTGGTATCGATCCCC
ATCGGCCTGCTGCAACGGGACAGGGAGGTGTGGGGCTCCGACGCCGACGAGTTCAACCCC
TTGAGGTTTAGCAATGGCGTCGCCAGGGCCGCCACGGATCCACACGCGCTGCTGTCTTTC
TCGCTCGGCCCGAGAGCCTGCACCGGCAAGAGCTTCGGCATCATAGAAGCACAGATCGTC
ATGGCGGTCATCCTCAGGAACTTCTCCTTCTCGCTCTCCCCCACCTACGTTCACAAGCCA
AAGTATGTCGTCTCCCTCACTCCCAAATGTGGGATGCCTCTCATCTTAAAGAACATCCAT
GCTTGA

Peptide Sequence

PEP ID

Zm00001d047417_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:9:129473610:129475921:-1 gene:Zm00001d047417 transcript:Zm00001d047417_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative cytochrome P450 superfamily protein

Sequence

MGADQWPWPWPWATPPPPALLLLASLLPALLLALWRLVWQPRAVARSFARQGIRGPPYCF
LAGSLSEAKRLARASRRRVPQLDVASHDIMPILLPPFHRWVVEYGRTFLYWIGPTPAIFS
VDLELIKEVLTDRTGLFGKDFMIPVFKVLLGNGLILANGDDWKRHRKVVLPAFNHERIKS
MSAVTAEATEQMAQRWCEQLILHSGARQAAEIQVDRAICDLTAEIIGRAAFGTSLQEAGE
VLLLMHEMQKMGAAAMVDAPILWYLPTRRNLTVRRLDKLLRAKITAMMAARVAANCGGGY
GDDLLGLLLEAWSPEPGRRHAGSDDEGTTTTTLTTGEVIDECKTFFGAGQETTATLLVWT
MFLLSTHPQWQDKVREEVLREFRGDVPTTDTLSRLKLLHMVLLETLRLYPPIVYIQRRTA
SDVVLRGMLQVPEGTVVSIPIGLLQRDREVWGSDADEFNPLRFSNGVARAATDPHALLSF
SLGPRACTGKSFGIIEAQIVMAVILRNFSFSLSPTYVHKPKYVVSLTPKCGMPLILKNIH
A

Transcript Sequence

Transcript ID

Zm00001d047417_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:129473610:129475921:-1 gene:Zm00001d047417 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative cytochrome P450 superfamily protein

Sequence

GACTATGCATGCATACGTTCGGGGTCGAGATCGAGCTGACCAATGATCCAATAGCCGCCG
CCTTGTGGTTGTGTCATATATGGGGGCCGACCAGTGGCCGTGGCCGTGGCCGTGGGCGAC
GCCGCCGCCGCCGGCCCTGCTGCTTCTGGCCTCACTACTGCCGGCGCTGCTGCTCGCGCT
GTGGCGCCTGGTGTGGCAACCGCGGGCCGTGGCGCGGTCGTTCGCGAGGCAGGGCATCCG
GGGGCCGCCCTACTGTTTCCTGGCCGGATCCTTGTCGGAGGCGAAGCGGCTGGCGCGTGC
CAGCCGGAGAAGGGTTCCGCAGCTGGACGTCGCTTCACATGACATCATGCCCATCTTGCT
GCCACCGTTCCACCGATGGGTCGTCGAGTATGGGAGGACATTCCTGTACTGGATCGGGCC
AACACCTGCAATCTTCTCCGTTGATTTAGAGTTGATTAAGGAAGTGCTCACAGACAGGAC
GGGCCTGTTTGGCAAGGACTTCATGATCCCCGTTTTCAAAGTCCTGTTGGGCAACGGGCT
CATCTTAGCAAACGGCGACGACTGGAAACGGCACAGGAAAGTTGTCCTTCCAGCCTTCAA
CCACGAGAGGATCAAGAGCATGTCGGCAGTGACGGCGGAAGCTACGGAACAGATGGCACA
GCGATGGTGCGAGCAGCTAATACTGCACAGTGGTGCCCGTCAAGCAGCGGAAATACAAGT
GGACCGCGCCATCTGCGACCTGACTGCCGAAATCATCGGCCGCGCCGCTTTCGGCACCAG
CCTCCAGGAAGCCGGTGAGGTCCTCCTCCTGATGCACGAGATGCAGAAGATGGGCGCCGC
GGCCATGGTGGATGCTCCCATACTCTGGTATCTGCCGACGCGGCGCAACCTAACGGTGCG
ACGTCTGGACAAGCTGTTGAGGGCCAAGATCACTGCGATGATGGCAGCGCGGGTGGCCGC
CAATTGCGGCGGTGGCTACGGCGACGACCTGCTCGGCCTCCTGCTGGAGGCGTGGTCGCC
GGAGCCTGGGCGGCGCCATGCTGGGAGCGACGACGAAGGGACGACGACGACGACGCTGAC
CACCGGAGAGGTGATCGACGAGTGCAAGACCTTCTTCGGCGCCGGGCAGGAGACCACCGC
CACCCTCCTCGTGTGGACCATGTTCCTGCTGAGCACGCACCCGCAGTGGCAGGACAAGGT
CAGGGAGGAGGTCCTCCGCGAATTCCGCGGCGACGTCCCCACCACCGACACCCTCTCCAG
ACTGAAGCTGCTTCACATGGTTCTGCTGGAGACACTGAGGCTCTACCCGCCGATCGTGTA
CATACAACGGAGGACTGCCTCAGACGTCGTGCTCAGGGGCATGCTGCAGGTGCCCGAGGG
GACCGTGGTATCGATCCCCATCGGCCTGCTGCAACGGGACAGGGAGGTGTGGGGCTCCGA
CGCCGACGAGTTCAACCCCTTGAGGTTTAGCAATGGCGTCGCCAGGGCCGCCACGGATCC
ACACGCGCTGCTGTCTTTCTCGCTCGGCCCGAGAGCCTGCACCGGCAAGAGCTTCGGCAT
CATAGAAGCACAGATCGTCATGGCGGTCATCCTCAGGAACTTCTCCTTCTCGCTCTCCCC
CACCTACGTTCACAAGCCAAAGTATGTCGTCTCCCTCACTCCCAAATGTGGGATGCCTCT
CATCTTAAAGAACATCCATGCTTGAGAAAAGATTACTGGCGGCACTGTAACTTGCTAATA
TTATATTGTACGTTGTGTGGCATCGACAGATCATATATATATACTAGAACTAGTCATGTG
CCCGTGCGTTGCTACGGATTCTATATATCACATAGATAAACTCTGTTTAATTGGGATATA
TAGTTGTTCAAACATGTTTCAAACATGTACAATAATATTAATTCGACATATTTCAGTGGC
AA