Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d047407_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:9:129140043:129148064:-1 gene:Zm00001d047407 gene_biotype:protein_coding transcript_biotype:protein_coding description:Low temperature viability protein
Sequence	ATGGGAGCAAGAGGAGGAGGAGGAGGCGGCCGCAAGGCCCGCAACTTTGCGACCTTCCGC CTCTTCCCGCGCGCCGGCGCCGCCGACCCCAACGACCGCGTGTTCGTACGCGTCGACAAC AACGACTACACTGTCCCCGGGTTCGCCGACGAGGACTCCTTCGACCCATCCCGGTCCGAC CCTTCCGCCGGCAATGGAAACTTCGGCTCCGCATCCGGCCCCCTCCCGGAGCACGTCCGC CGCGAGATCCTCGAGCTCGGCCTCCCTGACGACGGTTACAACTACCTCTCCCACCTCCGC GAGCTCCGTCCCGCCGCCGCCGCAGCCTCATCCTTCGTCCCCAGCTCCACCGGTCGCCCG GAGCCCCTCCCGCTCGATGTCAAGGCTTATGATGCAAGCAGGGTACGCATTGGTCTCAGC GAGGGTGAACTGGACGAGGGGAAGACGATGTGTAAGGTGGCTGCCAAGACTGCGCCAGTG AGGCGAATTGAGAAGGCTGTCGACCCAGATATCGCCAGGTTGCTCGATGAGAGCGATGTG TCTCATGTTGGGTCCGAGGATGAGGGGCTGGAGGAGGATTTTGTCATCATAGCTAACCAA GCTGAGGAGGAGGAGGAGGATGAGGATGGAGACATGGAAGAAAAGCAAGAGTGGAATGGT GTCTTCAGTGATGTTGAAGAGGAGGAGTTCGATTTTGAGGAGGATGAGCCAAAGCCAAGA GTGAGACGATTGCTGGATGAACAATTTGATTTGCTTGCTTTAGAGGAATATGGAGACAGT GATGATGATGACATGGGTGTTAAAGGTGGGGAATATGAACTGCCAAATGAGGCTATTGAT GAACTGAAACTGTTCCAAAATCAGAATGTATGTGTTGATGAAGAATATAGAACACCAGCA GATTTTGTTCGTCAAAAACTGGATTCAAGCATGGCTGATGAGGTGGATGAATCTGCTCGT GTGATAAAAAAATGTGCTGAATATGCTGAAATATATTTAAATGAAACTGCAGAAGAGGAG GTGGTTGTGCTTGTTTCGGAAAGCAGTGATGAATCTGAAGTTTGGGACTGTGAGACCATT GTTTCCACATTCTCTAACCTTGATAATCATCCTGGGACAATTGAAACTCCAGGAATCTCC AGAGCGCGGTTCCCTAGGGTTTTCCCTGGAGAAACAACTACAACAAATGGCATCATCAAG CTTCATGGGAAAGAGAAACTGCCAGTAGAATACCTGCCACAGAGGAGAAGAAATGGTGAA AAGGAGAAGAAAGTAAAGCCTGTAGAAGCTTCTGTCACTGATAAATTTAAAAAAGGAGCT GAGAAGGAAACAAAAGAGGAGAAGAAGGCAAGAAAGGCAGCAGTGAAAGAAGAAAAGAGA GAAGCCCGGAAAGCAAAGAAAGAGCTCAAAGGCCTGTATAAATCAGAAACGCAGAAGGCT CAGAAAGTTGCCGCTGTTACTGGACCTTCTTCCATTCGACTAATGTGA

Peptide Sequence

PEP ID	Zm00001d047407_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:9:129140043:129148064:-1 gene:Zm00001d047407 transcript:Zm00001d047407_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Low temperature viability protein
Sequence	MGARGGGGGGRKARNFATFRLFPRAGAADPNDRVFVRVDNNDYTVPGFADEDSFDPSRSD PSAGNGNFGSASGPLPEHVRREILELGLPDDGYNYLSHLRELRPAAAAASSFVPSSTGRP EPLPLDVKAYDASRVRIGLSEGELDEGKTMCKVAAKTAPVRRIEKAVDPDIARLLDESDV SHVGSEDEGLEEDFVIIANQAEEEEEDEDGDMEEKQEWNGVFSDVEEEEFDFEEDEPKPR VRRLLDEQFDLLALEEYGDSDDDDMGVKGGEYELPNEAIDELKLFQNQNVCVDEEYRTPA DFVRQKLDSSMADEVDESARVIKKCAEYAEIYLNETAEEEVVVLVSESSDESEVWDCETI VSTFSNLDNHPGTIETPGISRARFPRVFPGETTTTNGIIKLHGKEKLPVEYLPQRRRNGE KEKKVKPVEASVTDKFKKGAEKETKEEKKARKAAVKEEKREARKAKKELKGLYKSETQKA QKVAAVTGPSSIRLM

Transcript Sequence

Transcript ID	Zm00001d047407_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:129140043:129148064:-1 gene:Zm00001d047407 gene_biotype:protein_coding transcript_biotype:protein_coding description:Low temperature viability protein
Sequence	ACGTTTTCATTCTTCCTATTGTCAGCATCGCTCTCCAAATCCCAAAACCCTAACCTATCC ATCGTCGCCACCGTTTACCGTCGCTGCCGCCAATATGGGAGCAAGAGGAGGAGGAGGAGG CGGCCGCAAGGCCCGCAACTTTGCGACCTTCCGCCTCTTCCCGCGCGCCGGCGCCGCCGA CCCCAACGACCGCGTGTTCGTACGCGTCGACAACAACGACTACACTGTCCCCGGGTTCGC CGACGAGGACTCCTTCGACCCATCCCGGTCCGACCCTTCCGCCGGCAATGGAAACTTCGG CTCCGCATCCGGCCCCCTCCCGGAGCACGTCCGCCGCGAGATCCTCGAGCTCGGCCTCCC TGACGACGGTTACAACTACCTCTCCCACCTCCGCGAGCTCCGTCCCGCCGCCGCCGCAGC CTCATCCTTCGTCCCCAGCTCCACCGGTCGCCCGGAGCCCCTCCCGCTCGATGTCAAGGC TTATGATGCAAGCAGGGTACGCATTGGTCTCAGCGAGGGTGAACTGGACGAGGGGAAGAC GATGTGTAAGGTGGCTGCCAAGACTGCGCCAGTGAGGCGAATTGAGAAGGCTGTCGACCC AGATATCGCCAGGTTGCTCGATGAGAGCGATGTGTCTCATGTTGGGTCCGAGGATGAGGG GCTGGAGGAGGATTTTGTCATCATAGCTAACCAAGCTGAGGAGGAGGAGGAGGATGAGGA TGGAGACATGGAAGAAAAGCAAGAGTGGAATGGTGTCTTCAGTGATGTTGAAGAGGAGGA GTTCGATTTTGAGGAGGATGAGCCAAAGCCAAGAGTGAGACGATTGCTGGATGAACAATT TGATTTGCTTGCTTTAGAGGAATATGGAGACAGTGATGATGATGACATGGGTGTTAAAGG TGGGGAATATGAACTGCCAAATGAGGCTATTGATGAACTGAAACTGTTCCAAAATCAGAA TGTATGTGTTGATGAAGAATATAGAACACCAGCAGATTTTGTTCGTCAAAAACTGGATTC AAGCATGGCTGATGAGGTGGATGAATCTGCTCGTGTGATAAAAAAATGTGCTGAATATGC TGAAATATATTTAAATGAAACTGCAGAAGAGGAGGTGGTTGTGCTTGTTTCGGAAAGCAG TGATGAATCTGAAGTTTGGGACTGTGAGACCATTGTTTCCACATTCTCTAACCTTGATAA TCATCCTGGGACAATTGAAACTCCAGGAATCTCCAGAGCGCGGTTCCCTAGGGTTTTCCC TGGAGAAACAACTACAACAAATGGCATCATCAAGCTTCATGGGAAAGAGAAACTGCCAGT AGAATACCTGCCACAGAGGAGAAGAAATGGTGAAAAGGAGAAGAAAGTAAAGCCTGTAGA AGCTTCTGTCACTGATAAATTTAAAAAAGGAGCTGAGAAGGAAACAAAAGAGGAGAAGAA GGCAAGAAAGGCAGCAGTGAAAGAAGAAAAGAGAGAAGCCCGGAAAGCAAAGAAAGAGCT CAAAGGCCTGTATAAATCAGAAACGCAGAAGGCTCAGAAAGTTGCCGCTGTTACTGGACC TTCTTCCATTCGACTAATGTGATGGTTGATCTGTGGCACGTTTACTGATGAGCGACGACT ATGACAGTCTTGAATCCAAAAGATCGCCTGGACAAATGCATCAAAGCTACGAACGATGTA TGATACCAGTTCATATTTGTGCTATACTCATGGATTTTGTCGACAGGATACCCAATGCTT GCTTACTATATATTAGTTAGTTGAAGGAGAAGATAATTATACACACTTATCGAAAGCATG AAAGATCCTTAAAAGAAACTTTACGTCAGAAACAGGTCATGATGGTAAATCCTTGAGGCT TACTTTTCATCCAAAACACGTTTGACCTTCTTACTCTCACTAGAAACTATGCAATCCTAC AAAATATAACGCGGTTTCTGATTTTATGCCAAGTCAAACTATTCATTCTGGGTTTGACAA ATACTGCTATATCGTCATTCGTGCAACTTCTTACTCCTGGCCGCAACACCTGAACGAATC AACGAAAGTAGCCTCGGCATTGAACGCTATGTTAAATTGGCTATGGTTGAATTTTGGTTT TGTCAAAATGTGAACTGAATTTATTGGCAAAAAAACTGAGGCGTCTCAAGAGACTGACGT CCAAATAGGGGAGGGTAATGGCTCTAAATTTTACATAAAATTTAAGGATCCAATCTGATT AGGATTCGGCTATATTTCTATTATTTTTAAACTAAAATTAATTAAGGGTCGTTGCAAATT AATTAAGGGTCGTTGCCTATTGTGAAGAAACATTTTGATTGTGATTTATTGCCACCCATG TTAAATCGGTTGCAAAGAAGTATAGTTTTAGCAAAATGTTAATTTATTGGAAAAAAAACT GAAACATCTACCGGCACCATGATGTTTATATAATAACTAGGTATATGCCCGTGCGTTGCA ACGGGTAATACTAATGCAGGCATAGGTCATTGTTTAGTGAGGTAATCAACCGGCAGGGTG ACACTTGTGTATGTATAGGTCATTGTTTAGTGATGTTATCAACCAAACTTCATGTGTCGG GTCAACATGCGAGGGAGGTGACATTGGGAGGTAGGCTCGGGGGGCGGGGCGTCGGGTGTG TGGGACCGCGAATTGCGTCGGGAGGCAGATTGGAGGGCGTTAGGTGGATGGAGGTCGCGA CATGTGGAACGTGGCGCAGTTAGAGCGAGAGGCGGGAAGAGGTGGAGGAGGTCGGGTGCG GACAGTTCTGCCAAAGTGGCCTTAGGCGAATCGTGACTGCGTCTGCTACCCGAGTTTGGC TCGAATGAGTCGTGACTGCGTCTACTGCCCGGGCTTGGCCTCGGATGAGTCGTGACTGCC TGTCCCGCCCGGGCTTAGCCTCAGACGAGTCGTGATTATGTCTCCCGCTCGAGGGTGTCC TCAGGTGAGTCGTGACTGCGTCTCCCACCGGGCTTGGCCTTGGGCGATTCTTGACAGCCT ATCCCGCCCGAGAGTGGTCTCGAGCGAGTCATGACTGCGTATCCCACCGGAGGATGGCCT CGGGCGAGTTGTGACTACTTGTCTTGCCGGAGGTTGGCCTTGGGCCAGTCGTGACTGTCT ATCCCACTCGCAGATGGCCTCGAGCGAGTCATTACTGCCTGTCCCGCCCGCGGATGGCCT CAGGCGAGTTGTGAATATCTGTCCCACCTGAGGATGGCCACAAACGAGTCGTGACTATGC CTCCCACCAGGAGTTGCCCTTGGGCGGGTCATGACTGCATGTCCCCCCCGAGGGTTGCCT CAGGCGAGTCGTGACTGACTGTCTAGCCAGGGCTTGGCCTCGTTTGAGTCGTGACTGCGT CTCCCGTTGGGGGTTGGCCTCGGGCGAGTCGTGACTGTCTGTCTCGCCCGAGAATGGCCT CAGGCGAGTCATGGTTGCCTGTCTTGCTCAGGCTTGGCCTCGGACGAGTCGTGATTGTGT CTCCCGCCTGAGGGTGGCCTCGGGCGAGTCGTGACTGCCTCTCCCCCCGAGGATGGCCTC GAGTGAATCGTGACTGCCTCTCCCACCCAGGGTTGCCCTCCGGCGAATCTGAAAGGGAAA TGTGCTCTTGGGTCATTTCTAAGTATTTTGGTGATTAAGTGCAAACACAAGTGCTTAAAT GTGAATCTATGCCCACGGGTTGAACAAAGTGCAAATCACAAGTAAAGGTATGTTTCTAAG CCTTAGTACATTGGTTTTGTGTACTAATATATTTGTCTAAGTGTTAGAAACAGAAAGAAG AAGAGAAGAGAAGACTTGGCTGTGTACAGCCAAGAGGCTGTTTCGGTCTGGGGCACCGGA CTGTCCGGTGGTGCACCGGACAGTGTCCGGTGGTGCACCGGACAGTGTCCGGTGCGCCAG GCTGCCTCGACCGAAGAGGCCGCTCTCGGGAATTTGCCGACGACGTACGGCTATAATTCA CCGGACTGTCCGGTGTGCACCGGACTGTCCGGTGAGCCAACGGTCGGCTGAGCCAACGGT CGGCCGCGCGATCTGCGCGGGACACGTGGCCTGGCCAACGGTCGGAAGGAGGCACCGGAC TGTCCGGTGTGCACCGGACTGTCCGGTGCGCCAACGGCTCCTGCATCTGCAACGGTCGGC GCCAAATAAGGAAAGGAATCGGGCACCGGACACTGTCCGGTGTGCACCGGACTGTCCGGT GCGCTCGACGACAGAAGGCAAAGATGGCCTTCCAGATTTGTTCTCAACGGCTCCTAGCTG CCTTGGGGCTATAAAAGGGACCCCTAGGCGCATGGAGGAGCAAACCAAGCAACTCTTGAG CATTCTTGATCATCCACACTCAGTCTTTGCGCATCCGCTTGTTATTCTAAGTGATTCGAA GCTCCGTTCTTGTGAGAACTTTGAGATAGACTTTGAGCTCGATTCTTGGCTGTGTGTGTG CGCATTTCGCTGTGGATTTGTGTGTGTTGCTCCCTCCCTTACTCCGTGCTTCTTTGTGAA TCTTAAGTGTAAGGGCGAGAGACTCCAATCTGTGGAGATTCCTCGCGAGTGGGATAAAGA TAAGCAAGGCAAAACACCGTGGTATTCAAGTGGGTCTTTGGACCGCTTGAGAGGGGTTGA TTGCAACCCTCGTCCGTTGGGACGCCACAACGTGGAGTAGGCAAGTTTTGTACTTGGCCG AACCACGGGATAAATCACCGTGTCTCCTCTGTGTTGAATTCTCTGTGATTGTCGTATTGT GCAAGATCTCCTCGTTAGCCACTTGGCAATTATTGTGCTAACCCTTAACAAGTTTTTGTG GCTATAAGTTAAGTTTTTACAGGATCACCTATTCACCCCCCCTCTAGGTGCTCTCAATTG GTATCAGAGCCGTTCTCTTCAAGAAAGGGACTAACCACCCGAAGAGATGGATCCTAAGGG AAAAGGAATTGTGATCAACGATAAGGAGAAGGAGTCCTTCGTCAATGAGCCCAAAGATGA CAAGCTTACCGACTCCGGCTCGGGTCATAGACGAAAGGAAGGGAAGAAGAAGAAGACGAG GCGCATCAAGGAGATCGTCTACTACGACGACAGTGATGAGTCTACTTCTTCCCAAAAGGA CGACGACCACAACGACTACGAGCAAAGGAAACCGGTTAATTCTAACTTTTCCTTTGACTA CTCTCGTATTCCGCAAAGTTCAAATTCACATTTGCTTTCCATTCCACTCGGCAAGCCCCC ACACTTTGATGGGGAGGACTACGGATTTTGGAGCCACAAAATGCGTAGTCACCTATTCTC TCTCCATCCTAGTATATGGGAGATTGTAGATAGTGGAATGCACTTTAATAGTTCGGATAG TCCTATATTCATTAATGAGCAAATCCATAAGAATGCACAAGCTACTACTGTTCTTCTAGC TTCATTGTGCAGGGATGAATATAACAAAGTGAGTGGCTTGGATAACGCCAAGCAAATCTG GGATACCCTCAAGATCTCTCATGAGGGAAATGACGCTACCTTGCTCACCAAAATGGAGTT GGTGGAGGGCGAGCTCGGACGGTTCGCGATGATAAGGGGCGAGGAGCCAACTCAAACATA CAACCGGCTCAAGACCCTTATCAACAAAATAAGGAGCTACGGAAGCACGCGATGGACGGA CCACGACGTCGTCCGACTAATGCTAAGGTCCTTTACCGTTCTTGATCCTCATTTGGTGAA TAATATTCGTGAGAATCCCAGGTACACCAAAATGTCGCCCGAAGAAGTCTTAGGAAAATT TGTCAGCGGGCGAATGATGATCAAGGAGGCAAGGTACGTGGACGACGCCTTGAATGGACC GATCAACGAACCACAACCTTTTGCTCTCAAAGCAACAAAAGGCAAGGAGGCGCTACCTAG CAAGGTGGCACAAATTGAAGCGGTCAGACTTAATAATGAAGAGATGGCTCTCATCATCAA ACGCTTCAAGACGGTGCTAAGGGGTCACAAGGGGCAGCCAAGCAAGACCAAGACGAAGGG GAAGCGCTCATGCTTCAAGTGCGGTAAGATTGGTCATTTTATCGCTAACTGCCCTGATAA TGATAGTG