Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d047388_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:9:128467682:128470763:-1 gene:Zm00001d047388 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:magnesium transporter4 description: magnesium transporter4
Sequence

ATGGGGAAGCGATCCGGCGGCCGGAAGCTGCCGTTCTTCACCAGATCCTCCTCGTCCTCG
TCCAAGCGGAATCGCTCCGCCCGCCGCCTCCCTTCCCTCCCCAAGCAGGACAACGCGACG
AGGGCTCTTCTCGCCTCCCCCTCTGCTGCCTCGCCGTCCGCGACCCCGGGATCGGCGGCG
GCGGGGCAGACCGCCCAGCTGCCCCCTCCCCTCTCAGTTACCGCGGGCGGCGGGGTTGCC
GTGTCGGGGAAGGTCAACAAGAAGAAGGCCGGCACGCGCCTATGGATGCGGTTGGACCGC
TGGAGTGCCTCCGAGATCGTCGAGCTCGACAAGGCCTCCATAATCCGCCGCGCCGGACTG
CCCCCGCGCGACCTACGCATCCTCGGCCCCGTTTTCTCTCGCTCCTCCAGCATCCTCGCT
AGGGAGAAGGCGATGGTGATCAACCTCGAATTCATCAGGGCGATAGTTACTGCCGAGGAG
GTGCTCCTGTTGGACCCTCTCATGCACGAAGTGCTCCCTTTCGTTGACCAATTGAGGCAG
CACCTGCCTCTGAGGAGCCGGGTGGGTGAGAATGGTGAGTGTGCCCCTGATGGCAATGGG
GAAAAACAGAAGGGCTCGCTTAATGAAGCGACCGGGGCAGAGCATGAGCTGCCATTCGAG
TTCCATGTGCTGGAGGTAGCACTCGAGGTTGTGTGCTCATCGTTGGACCTTAGCGTGTCT
GACCTTGAGAGGCATGCTACTCCAGTGCTTGACGAACTGACCAAGAATGTAAGCACAAGG
AACCTTGAGCGAGTGCGGAACCTTAAGAGTCATCTTACCCGTTTGCTTGCCCGTGTGCAA
AAGGTCAGGGATGAAATAGAACATCTTCTAGATGATAATGAAGACATGGAACATCTGTAT
CTAACAAGGAAGCAAGTACAAAACCAACAGGTTGAGGCTTTAATGTCATCTGCTGCTTCC
AACAGCATTGTTCTTGCCGGAACAGGTGTGCCCAGGCTGAACTCTAGCTTCCGGCGTAGC
CTGAGCATTGCTACTAGCATGCATTTGGATAATGATGTGGAGGACCTAGAGATGTTACTT
GAGGCCTACTTCATGCAGCTGGATGGAATTCGCAACAGAATTTTGTCGGTTCGGGAGTAT
ATTGATGACACAGAAGACTACGTCAACATTCAACTCGACAACCAGCGTAACGAACTCATT
CAACTCCAGCTTACACTTACGATTGCATCCTTTGGCATAGCTGCCAACACTTTCATTGCT
GGAGCTTTTGCGATGAACATCCCGGGCTCTCTGTTCAACACCGATGGCAGCCTCTTCTGG
CCATTTGTCGGGAGCACCTCATCTGGCTGCTTTGTAATCACCGTCCTCTTGTTGGGGTAT
GCCTGGTGGAAGAAGTTGCTGGGTCCTTGA

Peptide Sequence

PEP ID

Zm00001d047388_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:9:128467682:128470763:-1 gene:Zm00001d047388 transcript:Zm00001d047388_T002 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:magnesium transporter4 description: magnesium transporter4
Sequence

MGKRSGGRKLPFFTRSSSSSSKRNRSARRLPSLPKQDNATRALLASPSAASPSATPGSAA
AGQTAQLPPPLSVTAGGGVAVSGKVNKKKAGTRLWMRLDRWSASEIVELDKASIIRRAGL
PPRDLRILGPVFSRSSSILAREKAMVINLEFIRAIVTAEEVLLLDPLMHEVLPFVDQLRQ
HLPLRSRVGENGECAPDGNGEKQKGSLNEATGAEHELPFEFHVLEVALEVVCSSLDLSVS
DLERHATPVLDELTKNVSTRNLERVRNLKSHLTRLLARVQKVRDEIEHLLDDNEDMEHLY
LTRKQVQNQQVEALMSSAASNSIVLAGTGVPRLNSSFRRSLSIATSMHLDNDVEDLEMLL
EAYFMQLDGIRNRILSVREYIDDTEDYVNIQLDNQRNELIQLQLTLTIASFGIAANTFIA
GAFAMNIPGSLFNTDGSLFWPFVGSTSSGCFVITVLLLGYAWWKKLLGP

Transcript Sequence

Transcript ID

Zm00001d047388_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:128467682:128470763:-1 gene:Zm00001d047388 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:magnesium transporter4 description: magnesium transporter4
Sequence

ACGATGAGACGACCGTCCCCGCCGTCCGACCCATTCACCCCCACTGTGCCGCGCCCCGCC
CCGCCCCGCCCCGCCCACGCCGCCGTGGCAACGCCATGGGGAAGCGATCCGGCGGCCGGA
AGCTGCCGTTCTTCACCAGATCCTCCTCGTCCTCGTCCAAGCGGAATCGCTCCGCCCGCC
GCCTCCCTTCCCTCCCCAAGCAGGACAACGCGACGAGGGCTCTTCTCGCCTCCCCCTCTG
CTGCCTCGCCGTCCGCGACCCCGGGATCGGCGGCGGCGGGGCAGACCGCCCAGCTGCCCC
CTCCCCTCTCAGTTACCGCGGGCGGCGGGGTTGCCGTGTCGGGGAAGGTCAACAAGAAGA
AGGCCGGCACGCGCCTATGGATGCGGTTGGACCGCTGGAGTGCCTCCGAGATCGTCGAGC
TCGACAAGGCCTCCATAATCCGCCGCGCCGGACTGCCCCCGCGCGACCTACGCATCCTCG
GCCCCGTTTTCTCTCGCTCCTCCAGCATCCTCGCTAGGGAGAAGGCGATGGTGATCAACC
TCGAATTCATCAGGGCGATAGTTACTGCCGAGGAGGTGCTCCTGTTGGACCCTCTCATGC
ACGAAGTGCTCCCTTTCGTTGACCAATTGAGGCAGCACCTGCCTCTGAGGAGCCGGGTGG
GTGAGAATGGTGAGTGTGCCCCTGATGGCAATGGGGAAAAACAGAAGGGCTCGCTTAATG
AAGCGACCGGGGCAGAGCATGAGCTGCCATTCGAGTTCCATGTGCTGGAGGTAGCACTCG
AGGTTGTGTGCTCATCGTTGGACCTTAGCGTGTCTGACCTTGAGAGGCATGCTACTCCAG
TGCTTGACGAACTGACCAAGAATGTAAGCACAAGGAACCTTGAGCGAGTGCGGAACCTTA
AGAGTCATCTTACCCGTTTGCTTGCCCGTGTGCAAAAGGTCAGGGATGAAATAGAACATC
TTCTAGATGATAATGAAGACATGGAACATCTGTATCTAACAAGGAAGCAAGTACAAAACC
AACAGGTTGAGGCTTTAATGTCATCTGCTGCTTCCAACAGCATTGTTCTTGCCGGAACAG
GTGTGCCCAGGCTGAACTCTAGCTTCCGGCGTAGCCTGAGCATTGCTACTAGCATGCATT
TGGATAATGATGTGGAGGACCTAGAGATGTTACTTGAGGCCTACTTCATGCAGCTGGATG
GAATTCGCAACAGAATTTTGTCGGTTCGGGAGTATATTGATGACACAGAAGACTACGTCA
ACATTCAACTCGACAACCAGCGTAACGAACTCATTCAACTCCAGCTTACACTTACGATTG
CATCCTTTGGCATAGCTGCCAACACTTTCATTGCTGGAGCTTTTGCGATGAACATCCCGG
GCTCTCTGTTCAACACCGATGGCAGCCTCTTCTGGCCATTTGTCGGGAGCACCTCATCTG
GCTGCTTTGTAATCACCGTCCTCTTGTTGGGGTATGCCTGGTGGAAGAAGTTGCTGGGTC
CTTGAACATGAAGCAAGATGGCAGAGAGCCTTGTCATGCTTGCAGAAAGGAAGAAGGCGT
CCTATCCTAAGGATATTAGAGAACCGTGGGGATAGCATGAAAACCTGTATATAACATCTC
AACAGTGTTCATAAGATGAGTACGTATAATATATCATTAGCATAAACGAGATGATGTGAT
GATCGATATACTTCCTTGTTAACATCATTAGCTGGCAACTGAAAAATGTTGCCATGAAAC
TATATTATCCAGCAGCGGCTGGCTTTGTGTACAATTTGCTTTTCTTTCTGTTTTGGAGGC
ACCATCTTCTGTGCTTCAGTTTTTGGTCAATTGGCAGGTGATGGTTGTTTAGCCACTATA
GCCGCATCTCGTGCCCAGTCTCACTGATCGTTCTTCTCTCTCACCTGACGAATTGTAAAC
TCTCATGATGAGTTGGTTGCTGAGTTGAGCCCTATCTCTCTTTGTTTCAACAGATCAGCT
CTTCGAATA