Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d047307_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:9:126209552:126212827:-1 gene:Zm00001d047307 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:proton gradient regulation3 homolog description: proton gradient regulation3 homolog
Sequence	ATGGAGCTCTGCTGCTCAGGCGTCCTAAGCGGCGCCGGCGCCTCGCGACCGGCGCCATCG AGGACCTCAAGGCCCGTGAAAATGGGGGCTCCGTCCACTGGGCTCTTGGTAGCCCCGCCG AAGCGGCGGCGAGGCGGCCGCGCCGGCTGCCGCCAGTCGGCCCCGCCAGTGCCGCCCCGG GACGAACGGCGGGTCGTGGGCACGGACAGCGTCGTCCACATGCTCCGGTCGGCGCCCGAC CCCGCCGAGGCCCTGGAACTCTTCACGGCCGCGGCGCGGCAGCCCACGAAGGTCCACACA ACGGAGTCGTGCAACTACATGCTGGAGCTGATGCGCGCCCACGGTCGTGTCGGGGACATG GCGCAGGTGTTCGACCTAATGCAGAAACAGGTCGTCAAGACCAACGTCGGCACCTTCGCC ACCATCTTCGGCGGCGTCGGCGTCGAGGGGGGGCTCCGCAGCGCGCCGGTCGCCCTGCCT GTGATGAGGGAGGCGGGGATGTCCCTCAACGCCTACACGTACAATGGCTTGATTTACTTC CTCGTTAAGTCCGGCTTCGATGCGGAGGCCATGGAGGTTTACAAGGCGATGGTTGAGGAC GGCATCTCGCCGAGTGTGAGGACCTACTCCGTGCTGATGGTGGCGTTTGGGAAGAAGAGG GATGTCGACACTGTTCTCTGGTTGCTGAACGAGATGGAGGCCCGCGGCGTCAAGCCAAAC GTGTATAGCTACACCATCTGCATTCGGGTTCTTGGGCAGGCCGCAAGGTTTGATGAAGCA TATCACATTCTTGGAAAGATGGAGGATTCAGGGTGCAAACCAGATGTCGTCACACATACT GTGATTATACAGGTTCTCTGTGATGCTGGCCGTCTGAGCGACGCCAAGGCTGTCTTTTGG AAGATGAAAGCGAGTGATCAGAAACCTGATCGTGTCACTTACATCACTCTCTTAGACAAG TGTGGTGACAGTGGTGACTCACAATCAGTTGTCGAAGTTTGGAATGCCATGGTAGCTGAT GGTTATAATGACAATATTGTTTCTTACACTGCAGTTGTGGATGCATTATGCCAAGTTGGC CGGGTTGATGAAGCTTTAGCTGTGTTTGATGAGATGAAGGAAAAGGGTATGTCGCCTGAG CAGTATTCCTATAACTCCTTAATATCTGGGTTTCTGAAAGCTGATATGTTTGACCGTGCT CTGGAGCTCTTCAACCATATGAATGCTTGTGGTCCTAGTCCAAATGGCTACACTCATGTC CTCTTCATCAACTACTACGGAAAATCTGGTCAATCTTTGAAAGCAATACAAAGATATGAG CACATGAAGAGCAAAGGGATTGTTCCTGATGTTGCTGCTGCTAATGCTGTTCTGTATAGT CTTGCTGGATCTGGCAGACTTGGAATGGCAAAAAGGGTCTTTTATGAACTAAAAGCGATG GGAGTCTCTCCAGACACTATCACGTACACAATGATGATCAAATGTTGCAGTAAGGCATCA AAAGCTGATGAAGCTATGAATTTTTTTTCTGACATGGTGGAAAGTGGATGTGTTCCTGAT GTTCTTGCATTGAATTCATTGATTGATACACTCTACAAGGGAGGCAAGGGAAACGAAGCA TGGCAACTTTTCCATAAATTGAAAGAAATGAAAATTGAGCCCACTAATGGTACGTACAAC ACACTTTTGTCAGGATTAGGAAGAGAAGGCAAAGTTAAGGAGGTAATGCAGCTGCTCGAA GAAATGACACGTACCATTTATCCACCTAATTTAATTACATACAACACAGTTCTAGATTGC CTCAGCAAAAATGGGGAGGTGAACTGTGCAATAGATATGCTTTACAGTATGACTGAGAAA GGTTGCGCACCTGACCTTTCATCTTATAACACTGTCATGTATGGCCTTATTAAAGAGGAA AGACTTGAAGAGGCATTCAGGATGTTTTGTCAAATGAAAAAGATTCTTGCTCCAGATTAT GCCACACTGTGTACTATCCTCCCAAGTTTTGTTAAAAATGGGTTGATGAAGGAAGCTCTG CATACTGTAAAGGAATATATTTTGAAGGCTGGTTGTAACGTGGACAAGTCTTCATTCCAT TCACTGATGGAAGGGATACTGAAGAAGGCTGGTGTGGAAAAATCAATCGAGTTTGCTGAA AACATAGCATCTAGGGGAATTCTGCTGAATGATTTCTTTTTATGCCCATTGATTAGACAC CTCTGCAAGCACAAGAAAGCTCTTGAAGCGCATCAACTATTCAATAAGTTTAAAGGTCTT GGAGTTTCACTAAAAACTGGTTCTTATAATTCTCTTATCCGTGGCCTTGTGGATGAAAAC CTGATTGATATCGCTGAAGACTTGTTCACTGAAATGAAAAGACTAGGATGTGGCCCAGAT GAATTCACTTACAATTTGATTCTTGATGCCATGGGAAAATCGATGCGGGTTGAGGAAATG TTAAAAGTCCAAAAGGAGATGCATCGTAAGGGATATGAATCAACATATGTTACTTATAAC ACTATCATTTCGGGTCTCGTAAAATCTAAAAGATTGGAACAGGCTATAGACCTGTACTAC AATCTGATGAGTGAAGGCTTCTCCCCAACACCATGTACATATGGTCCTCTTCTTGATGGC TTATTAAAATCTGGAAAGATGGTGGATGCTGAAAATCTTTTTAATGAGATGCTAGAGTAT GGATGCGAACCTAATTGCACCATCTACAATATTCTACTGAATGGACACCGAATAGCTGGC AACACAGAAAACGTTTGTCAGCTTTTTGAAAAGATGGTTGAGCAGGGAATAAACCCAGAT ATAAAATCCTATACAATTCTTATTGATACCCTGTGCACAGCTGGAAGATTAAATGATGGT TTGTGTTATTTTAGACAGCTACATGAATTAGGACTTGAGCCTGATCTTATCGTTTATAAT TTGCTCATTGATGGTCTTGGAAAATCTGAAAGAATAGAGGAAGCAGTCAGTCTCTTCAAC GAGATGAAGAAGAAAGGAATTATCCCAAACTTATACACATACAATTCACTAATTCTCCAC TTAGGGAAAGCAGGGAAAGCTGCTGAAGCTGCGCAAATGTATGAAGAACTACTGAGAAAA GGATGGAAACCTAGTGTTTTCACATATAATGCACTCATCAGGGGTTACAGTGTTTCTGGC AGTACCGATAATGCATACGCTGCCTATGGTCAGATGATTGTTGGAGGGTGCCAGCCTAAT TCTAGCACTTATATGCAACTTCCAAATCAATTGTGA

Peptide Sequence

PEP ID	Zm00001d047307_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:9:126209552:126212827:-1 gene:Zm00001d047307 transcript:Zm00001d047307_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:proton gradient regulation3 homolog description: proton gradient regulation3 homolog
Sequence	MELCCSGVLSGAGASRPAPSRTSRPVKMGAPSTGLLVAPPKRRRGGRAGCRQSAPPVPPR DERRVVGTDSVVHMLRSAPDPAEALELFTAAARQPTKVHTTESCNYMLELMRAHGRVGDM AQVFDLMQKQVVKTNVGTFATIFGGVGVEGGLRSAPVALPVMREAGMSLNAYTYNGLIYF LVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVAFGKKRDVDTVLWLLNEMEARGVKPN VYSYTICIRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQVLCDAGRLSDAKAVFW KMKASDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTAVVDALCQVG RVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHV LFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRVFYELKAM GVSPDTITYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLALNSLIDTLYKGGKGNEA WQLFHKLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLEEMTRTIYPPNLITYNTVLDC LSKNGEVNCAIDMLYSMTEKGCAPDLSSYNTVMYGLIKEERLEEAFRMFCQMKKILAPDY ATLCTILPSFVKNGLMKEALHTVKEYILKAGCNVDKSSFHSLMEGILKKAGVEKSIEFAE NIASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDEN LIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRVEEMLKVQKEMHRKGYESTYVTYN TIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKSGKMVDAENLFNEMLEY GCEPNCTIYNILLNGHRIAGNTENVCQLFEKMVEQGINPDIKSYTILIDTLCTAGRLNDG LCYFRQLHELGLEPDLIVYNLLIDGLGKSERIEEAVSLFNEMKKKGIIPNLYTYNSLILH LGKAGKAAEAAQMYEELLRKGWKPSVFTYNALIRGYSVSGSTDNAYAAYGQMIVGGCQPN SSTYMQLPNQL

Transcript Sequence

Transcript ID	Zm00001d047307_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:126209552:126212827:-1 gene:Zm00001d047307 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:proton gradient regulation3 homolog description: proton gradient regulation3 homolog
Sequence	ATGGAGCTCTGCTGCTCAGGCGTCCTAAGCGGCGCCGGCGCCTCGCGACCGGCGCCATCG AGGACCTCAAGGCCCGTGAAAATGGGGGCTCCGTCCACTGGGCTCTTGGTAGCCCCGCCG AAGCGGCGGCGAGGCGGCCGCGCCGGCTGCCGCCAGTCGGCCCCGCCAGTGCCGCCCCGG GACGAACGGCGGGTCGTGGGCACGGACAGCGTCGTCCACATGCTCCGGTCGGCGCCCGAC CCCGCCGAGGCCCTGGAACTCTTCACGGCCGCGGCGCGGCAGCCCACGAAGGTCCACACA ACGGAGTCGTGCAACTACATGCTGGAGCTGATGCGCGCCCACGGTCGTGTCGGGGACATG GCGCAGGTGTTCGACCTAATGCAGAAACAGGTCGTCAAGACCAACGTCGGCACCTTCGCC ACCATCTTCGGCGGCGTCGGCGTCGAGGGGGGGCTCCGCAGCGCGCCGGTCGCCCTGCCT GTGATGAGGGAGGCGGGGATGTCCCTCAACGCCTACACGTACAATGGCTTGATTTACTTC CTCGTTAAGTCCGGCTTCGATGCGGAGGCCATGGAGGTTTACAAGGCGATGGTTGAGGAC GGCATCTCGCCGAGTGTGAGGACCTACTCCGTGCTGATGGTGGCGTTTGGGAAGAAGAGG GATGTCGACACTGTTCTCTGGTTGCTGAACGAGATGGAGGCCCGCGGCGTCAAGCCAAAC GTGTATAGCTACACCATCTGCATTCGGGTTCTTGGGCAGGCCGCAAGGTTTGATGAAGCA TATCACATTCTTGGAAAGATGGAGGATTCAGGGTGCAAACCAGATGTCGTCACACATACT GTGATTATACAGGTTCTCTGTGATGCTGGCCGTCTGAGCGACGCCAAGGCTGTCTTTTGG AAGATGAAAGCGAGTGATCAGAAACCTGATCGTGTCACTTACATCACTCTCTTAGACAAG TGTGGTGACAGTGGTGACTCACAATCAGTTGTCGAAGTTTGGAATGCCATGGTAGCTGAT GGTTATAATGACAATATTGTTTCTTACACTGCAGTTGTGGATGCATTATGCCAAGTTGGC CGGGTTGATGAAGCTTTAGCTGTGTTTGATGAGATGAAGGAAAAGGGTATGTCGCCTGAG CAGTATTCCTATAACTCCTTAATATCTGGGTTTCTGAAAGCTGATATGTTTGACCGTGCT CTGGAGCTCTTCAACCATATGAATGCTTGTGGTCCTAGTCCAAATGGCTACACTCATGTC CTCTTCATCAACTACTACGGAAAATCTGGTCAATCTTTGAAAGCAATACAAAGATATGAG CACATGAAGAGCAAAGGGATTGTTCCTGATGTTGCTGCTGCTAATGCTGTTCTGTATAGT CTTGCTGGATCTGGCAGACTTGGAATGGCAAAAAGGGTCTTTTATGAACTAAAAGCGATG GGAGTCTCTCCAGACACTATCACGTACACAATGATGATCAAATGTTGCAGTAAGGCATCA AAAGCTGATGAAGCTATGAATTTTTTTTCTGACATGGTGGAAAGTGGATGTGTTCCTGAT GTTCTTGCATTGAATTCATTGATTGATACACTCTACAAGGGAGGCAAGGGAAACGAAGCA TGGCAACTTTTCCATAAATTGAAAGAAATGAAAATTGAGCCCACTAATGGTACGTACAAC ACACTTTTGTCAGGATTAGGAAGAGAAGGCAAAGTTAAGGAGGTAATGCAGCTGCTCGAA GAAATGACACGTACCATTTATCCACCTAATTTAATTACATACAACACAGTTCTAGATTGC CTCAGCAAAAATGGGGAGGTGAACTGTGCAATAGATATGCTTTACAGTATGACTGAGAAA GGTTGCGCACCTGACCTTTCATCTTATAACACTGTCATGTATGGCCTTATTAAAGAGGAA AGACTTGAAGAGGCATTCAGGATGTTTTGTCAAATGAAAAAGATTCTTGCTCCAGATTAT GCCACACTGTGTACTATCCTCCCAAGTTTTGTTAAAAATGGGTTGATGAAGGAAGCTCTG CATACTGTAAAGGAATATATTTTGAAGGCTGGTTGTAACGTGGACAAGTCTTCATTCCAT TCACTGATGGAAGGGATACTGAAGAAGGCTGGTGTGGAAAAATCAATCGAGTTTGCTGAA AACATAGCATCTAGGGGAATTCTGCTGAATGATTTCTTTTTATGCCCATTGATTAGACAC CTCTGCAAGCACAAGAAAGCTCTTGAAGCGCATCAACTATTCAATAAGTTTAAAGGTCTT GGAGTTTCACTAAAAACTGGTTCTTATAATTCTCTTATCCGTGGCCTTGTGGATGAAAAC CTGATTGATATCGCTGAAGACTTGTTCACTGAAATGAAAAGACTAGGATGTGGCCCAGAT GAATTCACTTACAATTTGATTCTTGATGCCATGGGAAAATCGATGCGGGTTGAGGAAATG TTAAAAGTCCAAAAGGAGATGCATCGTAAGGGATATGAATCAACATATGTTACTTATAAC ACTATCATTTCGGGTCTCGTAAAATCTAAAAGATTGGAACAGGCTATAGACCTGTACTAC AATCTGATGAGTGAAGGCTTCTCCCCAACACCATGTACATATGGTCCTCTTCTTGATGGC TTATTAAAATCTGGAAAGATGGTGGATGCTGAAAATCTTTTTAATGAGATGCTAGAGTAT GGATGCGAACCTAATTGCACCATCTACAATATTCTACTGAATGGACACCGAATAGCTGGC AACACAGAAAACGTTTGTCAGCTTTTTGAAAAGATGGTTGAGCAGGGAATAAACCCAGAT ATAAAATCCTATACAATTCTTATTGATACCCTGTGCACAGCTGGAAGATTAAATGATGGT TTGTGTTATTTTAGACAGCTACATGAATTAGGACTTGAGCCTGATCTTATCGTTTATAAT TTGCTCATTGATGGTCTTGGAAAATCTGAAAGAATAGAGGAAGCAGTCAGTCTCTTCAAC GAGATGAAGAAGAAAGGAATTATCCCAAACTTATACACATACAATTCACTAATTCTCCAC TTAGGGAAAGCAGGGAAAGCTGCTGAAGCTGCGCAAATGTATGAAGAACTACTGAGAAAA GGATGGAAACCTAGTGTTTTCACATATAATGCACTCATCAGGGGTTACAGTGTTTCTGGC AGTACCGATAATGCATACGCTGCCTATGGTCAGATGATTGTTGGAGGGTGCCAGCCTAAT TCTAGCACTTATATGCAACTTCCAAATCAATTGTGA