Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d047283_T035
CDS Infomation	cds chromosome:B73_RefGen_v4:9:125436239:125450315:-1 gene:Zm00001d047283 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vacuolar protein sorting-associated protein 52 A
Sequence	ATGGCGGTCGTCCCTGCTGCAGAGACCCTCGACGGGCTCAAGGACAGGTTCGATCTCGGG GTCTTCGTAGGCGACCTCGCCCTCGATGAGGAAGTCACCAGTGACGACGAGTCCCTGGAG GGGCTGCAGCAGGAGCTTGACAACTGCAAGAATGACCAGGAAGTCGCAAACATTCTAGCC AGTGGCATCAAACTGCGCGAGTACACAAAAGGCGTCGAGAATAACATACGCCAAATCGAG CTGGATTCTATCCAGGATTACATTAAGGAAAGTGAAAATCTAGTTTCTCTGCATGATCAA ATTTGTGATTGTGACAATATTTTGTTACAAATGGAAACAGTTCTGACTGGATTCCAGACA GAAATTGGTTCCATAAGTTCAGAGATAAAGGTCCTTCAGGAGAAATCTATGGACATGGGA TTAAAGCTGAAAAATCGTAAGGCTGCAGAATCTAAATTGTCAAAATTTGTCGAGGATATA ATAGTACCTCCAAGAATGATTGACATAATTGTTGATGGAGAGGTCAATGATGAATACATG AAAACACTTGAGACTCTAAGCAAAAAAATCAAATTCATCGATGCTGACCCCATGGTTAAA TCATCCAAGGCTCTAAAAGATGTTCAACCTGAGGTTGAGAGACTACGACAGAAAGCCGTC TCAAAGATTTTCGAGTTTGTCATCCAAAAGTTCTATGCCTTGAGAAAACCAAAGACTAAT ATTCAGATTCTACAGCAGAGTGTTCTTCTTAAATACAAGTACACGATAAATTTCCTTAAG GAACATGCTAAGGAGATATATGCAGAAGTTCGTACGGCGTATATTGACACCATGAATAAG GTGCTAAGTGCACATTTCCGGGCTTACATACAAGCATTGGAGAAACTACAGATGGACATA GCAACTTCCACTGATTTGCTTGGTGTTGAAACCAGAAGCACAGGCTTCATTTTCTCCATT GGAAAAGAACCTCTGAAAACCCGTCCTTCAGTGTTTGCTCTGGGTGAACGAATAAACATT TTGAAATCGACCAGCCAGCATTGA

Peptide Sequence

PEP ID	Zm00001d047283_P035
PEP Infomation	pep chromosome:B73_RefGen_v4:9:125436239:125450315:-1 gene:Zm00001d047283 transcript:Zm00001d047283_T035 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vacuolar protein sorting-associated protein 52 A
Sequence	MAVVPAAETLDGLKDRFDLGVFVGDLALDEEVTSDDESLEGLQQELDNCKNDQEVANILA SGIKLREYTKGVENNIRQIELDSIQDYIKESENLVSLHDQICDCDNILLQMETVLTGFQT EIGSISSEIKVLQEKSMDMGLKLKNRKAAESKLSKFVEDIIVPPRMIDIIVDGEVNDEYM KTLETLSKKIKFIDADPMVKSSKALKDVQPEVERLRQKAVSKIFEFVIQKFYALRKPKTN IQILQQSVLLKYKYTINFLKEHAKEIYAEVRTAYIDTMNKVLSAHFRAYIQALEKLQMDI ATSTDLLGVETRSTGFIFSIGKEPLKTRPSVFALGERINILKSTSQH

Transcript Sequence

Transcript ID	Zm00001d047283_T035
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:125436239:125450315:-1 gene:Zm00001d047283 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vacuolar protein sorting-associated protein 52 A
Sequence	GCAGAAGCGAGAGAGATCCGGAGCAGCCGCAGTCCCACCGACCTCGCCGCCGGTCGCCCT CCATCTCCTCGCCGCTGCCTCTCGGTAAGGCCCTTTCCTTTGCCCGCTCAACCCTCGGTT CGTTGTCTCGCTTCCATGTCCTGATTTGCGCCGTAAGCGCCCGAATCTAGCCGCAAGGTT GAGATCCGCGTCCATTTCTGGCTTCCGAGCGTCCGCTGCTTGTCGGTAGACGCGGATCTG TTGAATTTTGTGACTCACCGTCGTCGATCCGCAGGGTATCCCCTCCCTAGGGACCGTGAA TGCGTCTGTTGCGGCTGTACGCATTAGATTCTTCGGAGTATGTTGCGGCTTAGATTCTCC AGAGAAAGATGAAGATCTGTTGTGCATTGCGGTCTTCGGTGGTTGATCCGTCGATTTTTT TCGTTTCATGTTGTGTCTAGGTTAGACCTAATTGTTTAGGTAACCTCGTATCACTGGATG CGCATCTCCCCAGTGTTAGTCTCAAAGATACTAACTTACAGAGTGACTTTTCTCTAAAAG TGTGCATACAAGTTTTGAATACTTGTATGAGACATGTACTTGGAACTTTTAATTTCAGGA TACAACTTATAGGATAATATCACATGAGTGTGAGCATTACTCATAGGTGATATTTAGGAG CAAGTCATCTATATTTTAAACTTTGACATGTATTAAATTGAATGATACCAATTGATAATA TGAAATACCTCTTGAATAATGTTAATACCATTTGTTAGAAAACTAGAAGAGCTATATGCC AGGCTTCTAGAGAATTTTAAGATCATGTAGGTTTGCTCTGTATGAGTGAAAACAAGTAAT TCTACATACGGTATATCCAAAGTGTATGTCTGCGAAAAATATAAACTGATCATGCTAGAA GCCTAGAACATATGGGTATGCGTGGTTCAATATTTTTACCAGCTTTTCTGAGAATCTGGT TGTGGAAATAATCTAAATATCGTGGGGATTACATGCGGAGGAAGATAAAGCGGTGCAAAG GGTTCAGGATCTAGAAACCGACGAGTCTAAGTTTCTTCACTTTCTAAATCCTAAATCCTG TGGATGTTTTCATCTTCCTCCGCATATAAGCCTCATGATATCCAGATTCTCCGCATAACC ATATTCTTCGGGAATCCAGATTCTCAGGAAAACTTGTTCGAAAAAATGAACCAAATGTGG CCTCTGTCTTATCCATATTCTCGAGGAATCTAGATTCTCAAAAAAAAAAAAACTTACAAA CATGCCCTCTGTCTCATGTTCGCGTCCTATAATTGTAATCGGCGAGGAAAAATAACACTA GGATTCAATGACACAAGGCGACATGCCTGTTCACCTCGAGGTTCCCATTACTTTGAGATG TGTCGGATTAGACTTTTTAGGCGATTAGCAAAAAAATAGCTAAATTGATTAATTTAGTTA TTCTCTAAATGTTTTTTAAAAAGAGTAGATTAGTTCAACATGCTCGATAAATTCAGAACT CTGTATGAAAAGTAAAAGTGTGTTTGGTTGGATGTAGATGAGGGAAGGAAGGAGACAACT ACATTTTTATGATGTTTGGATGAGAGTCACACGGAAATAAGGTGAACACAAGAGCAATTT TTGGTGGCGGCGTGTTTTCCAAAATATCGAGTGGACGATGCCGCCCCCGCCTCATACTAC TTTGACATCAAACCAAACACATACTAAATCAGGCTATCCAAAAATAAAGAACAAATATAT AGGGATAGAGAGTTATTAAATTTGAAAGGGCCATTTACAAAGTATAGTGAAAATATTTTT TCCTTCTAATAATAGCCAAATTTACTTTTACAAAATGATTTAGCTAGTCTCTTGGAGTTG CTGTTAGGCTGTGGCTAGAATACCGTATATAGTCATACAAATACAAACAATGACAAACCG TATTGTTTATAAAGTTGGATTTGAAATAGAAGATGAGATAAGTAATACTACTAAAAATAC CTTAGAAGAGTAGCTTAGAATACGAGTGAGTTTGTTTATAGGTACGTGAGAACTGTGTCT AAACTATATTTGGAAAATATACTTAAAATTCAATATATAAATTAAAGTAAGGCATAATAA TCAAGAAGAAAGACAAAAACAATTAAATTCAGTCAAGACAAAAAGCAAAGAACCTGGTCT GAAATGGCAAAATATGTTAACCAGGCGAAAAGCATACAATCATATGGGTCGAAAGAACTA ACTGGGCCGTGTGGTCTGCTGTTAGATACGAGCATAGACTACAGGCTCAAAGTTCCAATT CCAACCCACCCGACGTCCGACGACAGCTGGTCCGGGTCTCCTCCATTTCCCGGGGACCCG TCCGATCCGATCCCAGTCCTCAACGCCAACGGTGGGAGATCTAGATCGGAGCTAGCCAGC CAGCCGGCCGACGCTGTCCGCCGGCCGCCCCGGCGATTCTGACCCGAGATGGCGGTCGTC CCTGCTGCAGAGACCCTCGACGGGCTCAAGGACAGGTTCGATCTCGGGGTCTTCGTAGGC GACCTCGCCCTCGATGAGGAAGTCACCAGTGACGACGAGTCCCTGGAGGGGCTGCAGCAG GAGCTTGACAACTGCAAGAATGACCAGGAAGTCGCAAACATTCTAGCCAGTGGCATCAAA CTGCGCGAGTACACAAAAGGCGTCGAGAATAACATACGCCAAATCGAGCTGGATTCTATC CAGGATTACATTAAGGAAAGTGAAAATCTAGTTTCTCTGCATGATCAAATTTGTGATTGT GACAATATTTTGTTACAAATGGAAACAGTTCTGACTGGATTCCAGACAGAAATTGGTTCC ATAAGTTCAGAGATAAAGGTCCTTCAGGAGAAATCTATGGACATGGGATTAAAGCTGAAA AATCGTAAGGCTGCAGAATCTAAATTGTCAAAATTTGTCGAGGATATAATAGTACCTCCA AGAATGATTGACATAATTGTTGATGGAGAGGTCAATGATGAATACATGAAAACACTTGAG ACTCTAAGCAAAAAAATCAAATTCATCGATGCTGACCCCATGGTTAAATCATCCAAGGCT CTAAAAGATGTTCAACCTGAGGTTGAGAGACTACGACAGAAAGCCGTCTCAAAGATTTTC GAGTTTGTCATCCAAAAGTTCTATGCCTTGAGAAAACCAAAGACTAATATTCAGATTCTA CAGCAGAGTGTTCTTCTTAAATACAAGTACACGATAAATTTCCTTAAGGAACATGCTAAG GAGATATATGCAGAAGTTCGTACGGCGTATATTGACACCATGAATAAGGTGCTAAGTGCA CATTTCCGGGCTTACATACAAGCATTGGAGAAACTACAGATGGACATAGCAACTTCCACT GATTTGCTTGGTGTTGAAACCAGAAGCACAGGCTTCATTTTCTCCATTGGAAAAGAACCT CTGAAAACCCGTCCTTCAGTGTTTGCTCTGGGTGAACGAATAAACATTTTGAAATCGACC AGCCAGCATTGATACCTCATATAGCTGAAGCGAAGTCACAGAAATACTCGTATGAAGTTC TTTTCAGAAGCTTGCAGAAACTTCTTATTGATACTGCCACTTCAGAATACCTGTTTACTG ATGATTTCTTTGGCGAAGAATCCATATTCCATGATATATTTGCAGGACCGATTCAAGTTG TTGATGAACATTTCAATACTGTACTCCTGAACTGTTATGATGCAATTGGCATAATGCTTA TGATCAGAATAATTCATCAGCACCAGCTCATCATGTTTAAGCGGCGAATCCCATGTTTGG ACTCTTACCTAGACAAAGTTAATATGTCACTCTGGCCTCGCTTCAAGATGGTGTTCGACT TGCATTTGAACAGCTTGCGAAATGCAAATATTAAAACACTTTGGGAGGATGATGTCCATC CACACTATGTTACAAGGAGATATGCTGAATTTACAGCTTCTCTAGTTCATCTCAATGTTG AGCATGGGGACGGTCAGCTTGATCTAAATTTGGAGCGATTGCGGATGGCCATTGAGGATT TGCTTGTTAAGTTGGCCAAGATGTTTTCCAAACCGAAGCTACAAACTGTCTTTCTGATAA ACAACTATGATTTAACAATTTCCATTTTGAAGGAAGCTGGAACTGAGGGTGGGAAAGCAC AACAACACTTCGAGGAGGTTCTTAAGAGCAACATCGCAATATATGTGGAAGAGTTGCTCC TGGAGCAGTTCAGTAGTTTGATCAGATTCGTCAAATCTCGTCCAGCGGATGAGACGGCTG CAAATTCCGAGAAAGCCAGCATTGCCGAAGTTGAGCCACTGGTAAAGGATTTCGCGAGCC GGTATAAGGCCGCGATCGAGCTGATGCACTATGATGTGATCACATCTTTCAGCAACTTTC TTTGCGGGATGGAGATCTTGAGAGCGACGCTCGCACAGCTCCTGCTATACTACACCAGGC TCTCCGAGTGTGTCAAGAGAATCAACGGCGGCTCTGCTCTCAACAAGGACCTTGTCTCCA TATCCTCCATCCTGTTCGAAATCAAGAAGTATTCTAGGACGTTTTAGTTGTTTCACCCCC TTCCATGTACACTAGGACGGCTAGCTGAGGGGTAGCTGTGTATCCTTACTTTGTAACTGG TATGTGCGACTGCAGGGGAAACAAGGGCATTTTGTCGTGGTTTGT