Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d047261_T012
CDS Infomation

cds chromosome:B73_RefGen_v4:9:124760896:124765580:1 gene:Zm00001d047261 gene_biotype:protein_coding transcript_biotype:protein_coding description:3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2
Sequence

ATGGGTTCGCTCCGTGATGGCAAGACCAACAGCAGCAGTGGCCGGCGGTGGTGCGCGGTG
ACCGGCGGCCGGGGCTTCATGGCGAGGCACCTGGTGGCCGCGCTGCTGCGCTCCGGCGAG
TGGCTTGTGCGGGTCACCGACCTCGCCCCGGATGTCGTGCTCGGCCTCGGCGACACCGAG
GACGTCCTCGATGACGCCCTCCGTGATGGCCGCGCCGTCTATGCCTCAGCGGATGTCTGC
AACCTAGACCAGCTTATTCAAGCTTTTGAAGGGGTTGAGGTTGTTTTCCACACAGCTGCT
GCGGATCCAAGCAAGAACGACCAGCAACTTCACTATAAGGTCAACGTTGAGGGGACAAAG
AACGTGGTTGATGCGTGCATGATTTGCAAGGTGAAAAGGCTTATCCACACCAGCTCTATT
GCTGTTGTGTTCGACGGAGTTAATGGGCTTCTCGATGCAAATGAATCATTGCCATACCCA
GACAAGTTTCCTGATGCGTATGGACAAACAAAGGCAGAAGCAGAAAAGATAGTCATGAAG
GCTAATGGCATTAGTGGCCTTCTAACTTGTTGCATACGTCCTGGTAGCATTTTTGGCCCT
GGTGACATAGTTATACTACCAACTCTGGACCAATGTGGAAAAACACACTTTGTTTTTGGT
GATGGGAAGAATTGTGATGATTTTGTATATGTTGAAAATGTGGTACATGGCCACATTTGT
GCTGAAAAAACTCTTTCTACAATGGAAGGCGCAAAAACCAGTGGTGGAAAAGCCTACTTT
ATAACCAATACGGAACCAATGAACATGTGGGACTTTCTATATCTGCTTCAAGAAGAACTT
GGATACAAAAGGTTGTTCAAGATAAGAATACCTTTGATTGTCATCCAGGCAGTAAGCTAT
TTGGTAGAGTGGGGATACAAGGTTCTACACCATTATGGAATGTGCCAGCCTCAAGTGCTA
ACACCAGCAAGGATCAAGTATCTGACAGTTCATAGAACATTCAGTTGTAACAAAGCTGCT
GAAGAACTTGGCTACAAACCAATTGTGACACTTATGGATGGTATGAAGCTAGCAGTCAAA
TCATATATTCGGTTGAGAAATCATGCAGATTTATCTTACAAACATATATAA

Peptide Sequence

PEP ID

Zm00001d047261_P012
PEP Infomation

pep chromosome:B73_RefGen_v4:9:124760896:124765580:1 gene:Zm00001d047261 transcript:Zm00001d047261_T012 gene_biotype:protein_coding transcript_biotype:protein_coding description:3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2
Sequence

MGSLRDGKTNSSSGRRWCAVTGGRGFMARHLVAALLRSGEWLVRVTDLAPDVVLGLGDTE
DVLDDALRDGRAVYASADVCNLDQLIQAFEGVEVVFHTAAADPSKNDQQLHYKVNVEGTK
NVVDACMICKVKRLIHTSSIAVVFDGVNGLLDANESLPYPDKFPDAYGQTKAEAEKIVMK
ANGISGLLTCCIRPGSIFGPGDIVILPTLDQCGKTHFVFGDGKNCDDFVYVENVVHGHIC
AEKTLSTMEGAKTSGGKAYFITNTEPMNMWDFLYLLQEELGYKRLFKIRIPLIVIQAVSY
LVEWGYKVLHHYGMCQPQVLTPARIKYLTVHRTFSCNKAAEELGYKPIVTLMDGMKLAVK
SYIRLRNHADLSYKHI

Transcript Sequence

Transcript ID

Zm00001d047261_T012
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:124760896:124765580:1 gene:Zm00001d047261 gene_biotype:protein_coding transcript_biotype:protein_coding description:3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2
Sequence

GGGCACATAACAATACATGCATGTACAAAGATCTGAATAATAATGGGTTCGCTCCGTGAT
GGCAAGACCAACAGCAGCAGTGGCCGGCGGTGGTGCGCGGTGACCGGCGGCCGGGGCTTC
ATGGCGAGGCACCTGGTGGCCGCGCTGCTGCGCTCCGGCGAGTGGCTTGTGCGGGTCACC
GACCTCGCCCCGGATGTCGTGCTCGGCCTCGGCGACACCGAGGACGTCCTCGATGACGCC
CTCCGTGATGGCCGCGCCGTCTATGCCTCAGCGGATGTCTGCAACCTAGACCAGCTTATT
CAAGCTTTTGAAGGGGTTGAGGTTGTTTTCCACACAGCTGCTGCGGATCCAAGCAAGAAC
GACCAGCAACTTCACTATAAGGTCAACGTTGAGGGGACAAAGAACGTGGTTGATGCGTGC
ATGATTTGCAAGGTGAAAAGGCTTATCCACACCAGCTCTATTGCTGTTGTGTTCGACGGA
GTTAATGGGCTTCTCGATGCAAATGAATCATTGCCATACCCAGACAAGTTTCCTGATGCG
TATGGACAAACAAAGGCAGAAGCAGAAAAGATAGTCATGAAGGCTAATGGCATTAGTGGC
CTTCTAACTTGTTGCATACGTCCTGGTAGCATTTTTGGCCCTGGTGACATAGTTATACTA
CCAACTCTGGACCAATGTGGAAAAACACACTTTGTTTTTGGTGATGGGAAGAATTGTGAT
GATTTTGTATATGTTGAAAATGTGGTACATGGCCACATTTGTGCTGAAAAAACTCTTTCT
ACAATGGAAGGCGCAAAAACCAGTGGTGGAAAAGCCTACTTTATAACCAATACGGAACCA
ATGAACATGTGGGACTTTCTATATCTGCTTCAAGAAGAACTTGGATACAAAAGGTTGTTC
AAGATAAGAATACCTTTGATTGTCATCCAGGCAGTAAGCTATTTGGTAGAGTGGGGATAC
AAGGTTCTACACCATTATGGAATGTGCCAGCCTCAAGTGCTAACACCAGCAAGGATCAAG
TATCTGACAGTTCATAGAACATTCAGTTGTAACAAAGCTGCTGAAGAACTTGGCTACAAA
CCAATTGTGACACTTATGGATGGTATGAAGCTAGCAGTCAAATCATATATTCGGTTGAGA
AATCATGCAGATTTATCTTACAAACATATATAAAAGATTATCATTATGGCATAGGATGCC
TCATGCTGACGATATACAACAGCTTTTGAGAATTGTCATAAGCGAAGGTCTGCCGTGATT
ATGTTTCCAATAAATAAAAAATTCGGTGTTTACAACTCGCATCAATGTCCTGATCAAAAA
CCCAGCATGTTGTATTCTGATTTAGTAGCAAAGATAGATTGTAACTCCTTAACAATGATC
AGGCATGTATTTCAGATATGTTAATTGGAACACAAATAATATTACTATCTGTATATGTAT
TGATCACCTTTGTGT