Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d047253_T019
CDS Infomation

cds chromosome:B73_RefGen_v4:9:124178351:124184872:-1 gene:Zm00001d047253 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:sucrose synthase1 description: sucrose synthase1
Sequence

ATGGGGGAAGGTGCAGGTGACCGTGTCCTGAGCCGCCTCCACAGCGTCAGGGAGCGCATT
GGCGACTCACTCTCTGCCCACCCCAATGAGCTTGTCGCCGTCTTCACCAGGCTGAAAAAC
CTTGGAAAGGGTATGCTGCAGCCCCACCAGATCATTGCCGAGTACAACAATGCGATCCCT
GAGGCTGAGCGCGAGAAGCTCAAGGATGGTGCTTTTGAGGATGTCCTGAGGGCAGCTCAG
GAGGCGATTGTCATCCCCCCATGGGTTGCACTTGCCATCCGCCCTAGGCCTGGTGTCTGG
GAGTATGTGAGGGTCAACGTCAGTGAGCTCGCTGTTGAGGAGCTGAGAGTTCCTGAGTAC
CTGCAGTTCAAGGAACAGCTTGTGGAAGAAGGCCCCAACAACAACTTTGTTCTTGAGCTG
GACTTTGAGCCATTCAATGCCTCCTTCCCCCGTCCTTCTCTGTCAAAGTCCATTGGCAAT
GGCGTGCAGTTCCTCAACAGGCACCTGTCATCAAAGCTCTTCCATGACAAGGAGAGCATG
TACCCCTTGCTCAACTTCCTTCGCGCCCACAACTACAAGGGGATGACCATGATGTTGAAC
GACAGAATCCGCAGTCTCAGTGCTCTGCAAGGTGCGCTGAGGAAGGCTGAGGAGCACCTG
TCCACCCTACAAGCTGATACCCCATACTCTGAATTTCACCACAGGTTCCAGGAACTTGGT
CTGGAGAAGGGTTGGGGTGATTGCGCTAAGCGTGCACAGGAGACTATCCACCTCCTCTTG
GACCTCCTGGAGGCCCCAGATCCGTCCACCCTGGAGAAGTTCCTTGGAACGATCCCCATG
GTGTTCAATGTCGTTATCCTCTCCCCTCATGGTTACTTCGCTCAAGCTAATGTCTTGGGT
TACCCTGACACCGGAGGCCAGGTTGTCTACATCTTGGATCAAGTGCGCGCTATGGAGAAC
GAAATGCTGCTGAGGATCAAGCAGTGTGGTCTTGACATCACGCCGAAGATCCTTATTGTC
ACCAGGTTGCTCCCTGATGCAACTGGCACCACCTGTGGCCAGCGCCTTGAGAAGGTCCTT
GGCACCGAGCACTGCCATATCCTTCGCGTGCCATTCAGAACAGAAAACGGAATCGTTCGC
AAGTGGATCTCGCGATTTGAAGTCTGGCCGTACCTGGAGACTTACACTGATGACGTGGCG
CATGAGATTGCTGGAGAGCTTCAGGCCAATCCTGACCTGATCATCGGAAACTACAGTGAC
GGAAACCTTGTTGCGTGTTTGCTCGCCCACAAGATGGGTGTTACTCACTGTACCATTGCC
CATGCGCTTGAGAAAACTAAACCTGTCCATCTACTTCCCGTACACCGAGTCGCACAAGAG
GCTGACCTCCCTTCACCCGGAGATTGA

Peptide Sequence

PEP ID

Zm00001d047253_P019
PEP Infomation

pep chromosome:B73_RefGen_v4:9:124178351:124184872:-1 gene:Zm00001d047253 transcript:Zm00001d047253_T019 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:sucrose synthase1 description: sucrose synthase1
Sequence

MGEGAGDRVLSRLHSVRERIGDSLSAHPNELVAVFTRLKNLGKGMLQPHQIIAEYNNAIP
EAEREKLKDGAFEDVLRAAQEAIVIPPWVALAIRPRPGVWEYVRVNVSELAVEELRVPEY
LQFKEQLVEEGPNNNFVLELDFEPFNASFPRPSLSKSIGNGVQFLNRHLSSKLFHDKESM
YPLLNFLRAHNYKGMTMMLNDRIRSLSALQGALRKAEEHLSTLQADTPYSEFHHRFQELG
LEKGWGDCAKRAQETIHLLLDLLEAPDPSTLEKFLGTIPMVFNVVILSPHGYFAQANVLG
YPDTGGQVVYILDQVRAMENEMLLRIKQCGLDITPKILIVTRLLPDATGTTCGQRLEKVL
GTEHCHILRVPFRTENGIVRKWISRFEVWPYLETYTDDVAHEIAGELQANPDLIIGNYSD
GNLVACLLAHKMGVTHCTIAHALEKTKPVHLLPVHRVAQEADLPSPGD

Transcript Sequence

Transcript ID

Zm00001d047253_T019
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:124178351:124184872:-1 gene:Zm00001d047253 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:sucrose synthase1 description: sucrose synthase1
Sequence

ACCCATCCATTCCACCTCCGTTCACCCCGTCCATTTGATTTGCGTTCACTGCGTTGCGTT
TCCTTGGAGGGGATTGTTCTCTCCTCTCCTTTGGATTGGAGGTCCCTCCTTCTTCTCCTC
TCTCTCTCAGAGGAAGGCCTGAGGATCCAGGAAGAGGACAGCAATGGGGGAAGGTGCAGG
TGACCGTGTCCTGAGCCGCCTCCACAGCGTCAGGGAGCGCATTGGCGACTCACTCTCTGC
CCACCCCAATGAGCTTGTCGCCGTCTTCACCAGGCTGAAAAACCTTGGAAAGGGTATGCT
GCAGCCCCACCAGATCATTGCCGAGTACAACAATGCGATCCCTGAGGCTGAGCGCGAGAA
GCTCAAGGATGGTGCTTTTGAGGATGTCCTGAGGGCAGCTCAGGAGGCGATTGTCATCCC
CCCATGGGTTGCACTTGCCATCCGCCCTAGGCCTGGTGTCTGGGAGTATGTGAGGGTCAA
CGTCAGTGAGCTCGCTGTTGAGGAGCTGAGAGTTCCTGAGTACCTGCAGTTCAAGGAACA
GCTTGTGGAAGAAGGCCCCAACAACAACTTTGTTCTTGAGCTGGACTTTGAGCCATTCAA
TGCCTCCTTCCCCCGTCCTTCTCTGTCAAAGTCCATTGGCAATGGCGTGCAGTTCCTCAA
CAGGCACCTGTCATCAAAGCTCTTCCATGACAAGGAGAGCATGTACCCCTTGCTCAACTT
CCTTCGCGCCCACAACTACAAGGGGATGACCATGATGTTGAACGACAGAATCCGCAGTCT
CAGTGCTCTGCAAGGTGCGCTGAGGAAGGCTGAGGAGCACCTGTCCACCCTACAAGCTGA
TACCCCATACTCTGAATTTCACCACAGGTTCCAGGAACTTGGTCTGGAGAAGGGTTGGGG
TGATTGCGCTAAGCGTGCACAGGAGACTATCCACCTCCTCTTGGACCTCCTGGAGGCCCC
AGATCCGTCCACCCTGGAGAAGTTCCTTGGAACGATCCCCATGGTGTTCAATGTCGTTAT
CCTCTCCCCTCATGGTTACTTCGCTCAAGCTAATGTCTTGGGTTACCCTGACACCGGAGG
CCAGGTTGTCTACATCTTGGATCAAGTGCGCGCTATGGAGAACGAAATGCTGCTGAGGAT
CAAGCAGTGTGGTCTTGACATCACGCCGAAGATCCTTATTGTCACCAGGTTGCTCCCTGA
TGCAACTGGCACCACCTGTGGCCAGCGCCTTGAGAAGGTCCTTGGCACCGAGCACTGCCA
TATCCTTCGCGTGCCATTCAGAACAGAAAACGGAATCGTTCGCAAGTGGATCTCGCGATT
TGAAGTCTGGCCGTACCTGGAGACTTACACTGATGACGTGGCGCATGAGATTGCTGGAGA
GCTTCAGGCCAATCCTGACCTGATCATCGGAAACTACAGTGACGGAAACCTTGTTGCGTG
TTTGCTCGCCCACAAGATGGGTGTTACTCACTGTACCATTGCCCATGCGCTTGAGAAAAC
TAAACCTGTCCATCTACTTCCCGTACACCGAGTCGCACAAGAGGCTGACCTCCCTTCACC
CGGAGATTGAGGAGCTCCTGTACAGCCAAACCGAGAACACGGAGCACAAGTTCGTTCTGA
ACGACAGGAACAAGCCAATCATCTTCTCCATGGCTCGTCTCGACCGTGTGAAGAACTTGA
CTGGGCTGGTGGAGCTGTACGGCCGGAACAAGCGGCTGCAGGAGCTGGTGAACCTCGTGG
TCGTCTGCGGCGACCATGGCAACCCTTCCAAGGACAAGGAGGAGCAGGCCGAGTTCAAGA
AGATGTTTGACCTCATCGAGCAGTACAACCTGAACGGGCACATCCGCTGGATCTCCGCCC
AGATGAACCGCGTCCGCAACGGCGAGCTGTACCGCTACATCTGCGACACCAAGGGCGCCT
TCGTGCAGCCTGCTTTCTACGAGGCTTTCGGGCTGACGGTGGTTGAGGCCATGACCTGCG
GCCTGCCCACGTTTGCCACAGCCTACGGCGGTCCGGCCGAGATCATCGTGCACGGCGTGT
CTGGCTACCACATCGACCCTTACCAGGGCGACAAGGCGTCGGCCCTGCTCGTGGACTTCT
TCGACAAGTGCCAGGCGGACCCGAGCCACTGGAGCAAGATCTCCCAGGGCGGGCTCCAGC
GTATCGAGGAGAAGTACACCTGGAAGCTCTACTCGGAGAGGCTGATGACCCTCACCGGCG
TGTACGGGTTCTGGAAGTACGTGTCCAACCTGGAGAGGCGCGAGACCCGGCGGTACCTGG
AGATGCTGTACGCGCTCAAGTACCGCACCATGGCGAGCACCGTGCCGCTGGCCGTGGAGG
GAGAGCCCTCCAGCAAGTGATGCGCGACGGCGGCCACAGACCTGATCGATCGATGAGCGA
GAGGGAGCACTCGGAGTGTCGTGTCTTTTCCCTTGCCATTTCTTTCTTTTTTTCCCTTCC
CGGAGGCGAAAAAAAGAGTCTGCTTTTGCTAGGCGGCGGGCGTTCGTTGCTGCTCTTTGC
TTCAAGAGTTAAATTTACCTACCTTGTCAAGGTCTTGTTCCATCATTGATCCGGGTGTCG
CTTTTTTAGTAGTCTGATGGACTGTTAGTAGTTTGCGTTGCGTCGGTTGAGAGGGAACGT
TGGTGGTGGTGGTGTGTGTGCAGTCAGGCGTGGTGCTCCCTTTGTTTCCTGGATGGGATG
TTGCTCCTTGAATAATAATCGTAGTGGCCTTGGAGCCCTTTTC