Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d047242_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:9:123767460:123771340:1 gene:Zm00001d047242 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vacuolar cation/proton exchanger 2
Sequence	ATGATGGTGGCGGAGAAGCCCGCGCTGGGGTTCCAGGCGCACGGGGACGGGGACGACGAG CTGGAGCTGGAGCTAGCGTCGCCGGCGCCGCCGCCCCGGAAGATGCACTCGCTGGAATTC GAGCACATCGGCTCGCTCGCCGCCGTGGCCGAGTCGCTCGCGCCCGGGAGCAGGTGGCAG AGGGCGCTCACCAGCGTGCGCGTCGTCATCTTCCAGGCCAAGATCAACGTGCTCCTCCCC TTCGGCCCGCTCGCCATCATGCTCCACTACCTCTCCGGAACGCACCAAGGATGGGTTTTT CTTTTCAGCTTAATCGGCATTACCCCGTTGGCCGAGAGATTGGGATACGCAACTGAGCAA CTTGCTTGCTACACTGGCCCAACAGTTGGGGGGCTACTGAATGCTACATTTGGAAATGCA ACGGAAATGATTATATCAATATACGCACTGAAAAATGGGATGATTCGGGTCGTCCAGCAG TCACTACTAGGCTCAATATTGTCAAATATGCTGCTGGTTCTTGGGTGTGCTTTCTTTGCT GGTGGTCTTGTCCATTCTGACAGGGACCAGGTCTTCAACAAGGCATCAGCTGTTGTAAAC TCAGGACTACTGTTGATGGCTGTCTTAGGCCTTATGTTCCCAGCAGTGCTTCATTTCACA CATTCAGAAGCGCAGTATGGAAAATCTGAAGTAGCTCTTTCAAGGTTTAGCAGCTGCATC ATGCTTGTGGCCTATGCTAGCTATCTATTTTTTCAACTAAAGAGCCACCGCAGTATGTAC AGCCCAATTGGTGATGAAGAAGCCGCCGCTGAGGAGGAGGATGAAAAGGAGATTACACAA GGGGAAGCCATCTGCTGGCTTTTCATATTGACTATTTGGATTTCAGTACTCTCAGGGTAC CTGGTTGATGCCATTCAGGGTGCGTCTGATTCATTAAACTTGCCAGTGGCCTTTATTAGT GTTATTCTGCTTCCTATTGTGGGGAATGCTGCTGAACATGCAAGCGCCATCATGTTTGCC ATGAAAAACAAATTGGACATTACATTGGGAGTTGCGATAGGGTCATCAACACAGATCTCC ATGTTTGTGATTCCATTCTGCGTGGTAATTGGCTGGATGATGGGACAAGAAATGGACTTG AATTTTCAACTGTTCGAGACAGCGACTCTCTTTATAACTGTACTAGTGGTGGCATTCATG CTACAGGAAGGCACATCAAACTATTTTAAAGGTCTTATGCTCATCTTATGCTACCTCATA GTTGCTGCAAGCTTTTTTGTCCATGTCGACCCTGATGCAAGTGATAACTAA

Peptide Sequence

PEP ID	Zm00001d047242_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:9:123767460:123771340:1 gene:Zm00001d047242 transcript:Zm00001d047242_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vacuolar cation/proton exchanger 2
Sequence	MMVAEKPALGFQAHGDGDDELELELASPAPPPRKMHSLEFEHIGSLAAVAESLAPGSRWQ RALTSVRVVIFQAKINVLLPFGPLAIMLHYLSGTHQGWVFLFSLIGITPLAERLGYATEQ LACYTGPTVGGLLNATFGNATEMIISIYALKNGMIRVVQQSLLGSILSNMLLVLGCAFFA GGLVHSDRDQVFNKASAVVNSGLLLMAVLGLMFPAVLHFTHSEAQYGKSEVALSRFSSCI MLVAYASYLFFQLKSHRSMYSPIGDEEAAAEEEDEKEITQGEAICWLFILTIWISVLSGY LVDAIQGASDSLNLPVAFISVILLPIVGNAAEHASAIMFAMKNKLDITLGVAIGSSTQIS MFVIPFCVVIGWMMGQEMDLNFQLFETATLFITVLVVAFMLQEGTSNYFKGLMLILCYLI VAASFFVHVDPDASDN

Transcript Sequence

Transcript ID	Zm00001d047242_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:123767460:123771340:1 gene:Zm00001d047242 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vacuolar cation/proton exchanger 2
Sequence	CGATCACCACTTCGGCGCCGCGCGTCCGAACCCCAACCCAACCGCGCTGTCCGGCGATCC TGATCGAATTGGAACCGCCTTCACCCCCACCCAGTGCAGTGCTCGCGTGCTCCGCTCTGC GCCGGCAGCCCGCCCGGACCGGACCAGGCCGTCTCTGCATTTGCGCGGGCCGCGCTCTCG CAGATGATGGTGGCGGAGAAGCCCGCGCTGGGGTTCCAGGCGCACGGGGACGGGGACGAC GAGCTGGAGCTGGAGCTAGCGTCGCCGGCGCCGCCGCCCCGGAAGATGCACTCGCTGGAA TTCGAGCACATCGGCTCGCTCGCCGCCGTGGCCGAGTCGCTCGCGCCCGGGAGCAGGTGG CAGAGGGCGCTCACCAGCGTGCGCGTCGTCATCTTCCAGGCCAAGATCAACGTGCTCCTC CCCTTCGGCCCGCTCGCCATCATGCTCCACTACCTCTCCGGAACGCACCAAGGATGGGTT TTTCTTTTCAGCTTAATCGGCATTACCCCGTTGGCCGAGAGATTGGGATACGCAACTGAG CAACTTGCTTGCTACACTGGCCCAACAGTTGGGGGGCTACTGAATGCTACATTTGGAAAT GCAACGGAAATGATTATATCAATATACGCACTGAAAAATGGGATGATTCGGGTCGTCCAG CAGTCACTACTAGGCTCAATATTGTCAAATATGCTGCTGGTTCTTGGGTGTGCTTTCTTT GCTGGTGGTCTTGTCCATTCTGACAGGGACCAGGTCTTCAACAAGGCATCAGCTGTTGTA AACTCAGGACTACTGTTGATGGCTGTCTTAGGCCTTATGTTCCCAGCAGTGCTTCATTTC ACACATTCAGAAGCGCAGTATGGAAAATCTGAAGTAGCTCTTTCAAGGTTTAGCAGCTGC ATCATGCTTGTGGCCTATGCTAGCTATCTATTTTTTCAACTAAAGAGCCACCGCAGTATG TACAGCCCAATTGGTGATGAAGAAGCCGCCGCTGAGGAGGAGGATGAAAAGGAGATTACA CAAGGGGAAGCCATCTGCTGGCTTTTCATATTGACTATTTGGATTTCAGTACTCTCAGGG TACCTGGTTGATGCCATTCAGGGTGCGTCTGATTCATTAAACTTGCCAGTGGCCTTTATT AGTGTTATTCTGCTTCCTATTGTGGGGAATGCTGCTGAACATGCAAGCGCCATCATGTTT GCCATGAAAAACAAATTGGACATTACATTGGGAGTTGCGATAGGGTCATCAACACAGATC TCCATGTTTGTGATTCCATTCTGCGTGGTAATTGGCTGGATGATGGGACAAGAAATGGAC TTGAATTTTCAACTGTTCGAGACAGCGACTCTCTTTATAACTGTACTAGTGGTGGCATTC ATGCTACAGGAAGGCACATCAAACTATTTTAAAGGTCTTATGCTCATCTTATGCTACCTC ATAGTTGCTGCAAGCTTTTTTGTCCATGTCGACCCTGATGCAAGTGATAACTAAGTGACA AATCTGCTTACAGCATACCTGTGAACTGAATGGAGAGGCTACGACCTAACTGCAGAGTTA GCCAATAGCATTGCCCTGCGTAGATAAGGACCTGCAAGAGTCCTGAATTTGGAAGCAACT TGTGGGCAGAATCTCGGACCGAGGGTTTAACTTGGGGCTCAAGATTACAAGGAGCTGATG CAGCTTTTTTAGGATAGCAACAGCATCGCCCGTTGAGGAACTGTAACTTTATGTGACGGA ATCACAAAAATTTACCATTGTATTTGTTCAAGCTACACGTGCCACAGTTTTTTATGTTGT GATTGGTAGGTACGGGGAAGTTAGACCTCTAGTGCTATTGGGAAGAAAATTACCATTACA TTTATTTAATATATTTTCCTTTTTTTCCTTGTAAAAACTTGCAAATCTAGGCATATGTCA CCTGTTGGGTT