Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d047166_T004
CDS Infomation

cds chromosome:B73_RefGen_v4:9:120520323:120525268:-1 gene:Zm00001d047166 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cystathionine gamma-synthase 1 chloroplastic
Sequence

ATGGATGCTCTACAAAATGCGTTGGACAACAATAATGTATCTCTTTTCTTCACGGAGACT
CCCACAAATCCATTTCTCAGATGCATTGATATTGAACATGTATCAAATATGTGCCATAGC
AAGGGAGCGTTGCTTTGTATCGACAGTACTTTTGCCTCCCCTATCAATCAGAAGGCACTG
ACTTTAGGCGCTGACCTAGTTATTCATTCTGCAACAAAGTACATTGCTGGACACAACGAT
GTTATTGGAGGATGCGTCAGTGGCAGAGATGAGTTGGTTTCCAAAGTCCGTATTTATCAC
CATGTGGTTGGTGGTGTTCTAAACCCGAATGCTGCGTACCTTATCCTTCGAGGCATGAAA
ACACTTCATCTCCGTGTGCAATGTCAGAATAACACTGCTCTTCGGATGGCCCAGTTTTTA
GAGGAACATCTAAAGATTGCCCGTGTCTACTATCCTGGCTTGCCTAGCCACCCTGAACAT
CACATTGCCAAGAGTCAAATGACTGGCTTTGGTGGTGTGGTTAGTTTTGAGGTTGCTGGA
GACTTTGATGCCACAAGGAAATTCATCGATTCTGTTAAGATACCCTATCATGCCCCTTCT
TTCGGAGGCTGTGAGAGCATAATTGATCAGCCTGCTATCATGTCCTACTGGGATTCAAAG
GAGCAGAGGGACATCTATGGGATCAAGGACAACCTGATCAGGTTCAGCATTGGAGTGGAG
GATTTTGAGGACCTTAAGAATGATCTTGTTCAGGCCCTCGAGAAGATATAA

Peptide Sequence

PEP ID

Zm00001d047166_P004
PEP Infomation

pep chromosome:B73_RefGen_v4:9:120520323:120525268:-1 gene:Zm00001d047166 transcript:Zm00001d047166_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cystathionine gamma-synthase 1 chloroplastic
Sequence

MDALQNALDNNNVSLFFTETPTNPFLRCIDIEHVSNMCHSKGALLCIDSTFASPINQKAL
TLGADLVIHSATKYIAGHNDVIGGCVSGRDELVSKVRIYHHVVGGVLNPNAAYLILRGMK
TLHLRVQCQNNTALRMAQFLEEHLKIARVYYPGLPSHPEHHIAKSQMTGFGGVVSFEVAG
DFDATRKFIDSVKIPYHAPSFGGCESIIDQPAIMSYWDSKEQRDIYGIKDNLIRFSIGVE
DFEDLKNDLVQALEKI

Transcript Sequence

Transcript ID

Zm00001d047166_T004
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:120520323:120525268:-1 gene:Zm00001d047166 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cystathionine gamma-synthase 1 chloroplastic
Sequence

TCGCCGCCGCGTGGTCCGACTGCCCCGCCGCTCGCCCCCACTTAGGCGGCGGAGGTCAGC
GCAATTCCCAACGCTAAGGTTGCGCAACCGTCCGCCGTCGTCTTGGCCGAGCGTAACCTG
CTCGGCTCCGACGCCAGCCTCGCCGTCCACGCGGGGGAGAGGCTGGGAAGAAGGATCGCC
ACGGATGCGATCACCACACCGGTAGTGAACACGTCGGCCTACTGGTTCAACAACTCGCAA
GAGCTAATCGACTTTAAGGAGGGGAGGCATGCTAGCTTCGAGTATGGGAGGTATGGGAAC
CCGACCACGGAGGCATTAGAGAAGAAGATGAGCGCACTGGAGAAAGCAGAGTCCACAGTG
TTCGTGGCATCGGGGATGTATGCAGCTGTGGCTATGCTCAGTGCACTTGTTCCGGCTGGT
GGGCACATTGTGACCACCACGGATTGCTACCGGAAAACAAGGATTTACATGGAAACTGAG
CTCCCCAAGAGGGGAATTTCGGCCTGCTGACATGGATGCTCTACAAAATGCGTTGGACAA
CAATAATGTATCTCTTTTCTTCACGGAGACTCCCACAAATCCATTTCTCAGATGCATTGA
TATTGAACATGTATCAAATATGTGCCATAGCAAGGGAGCGTTGCTTTGTATCGACAGTAC
TTTTGCCTCCCCTATCAATCAGAAGGCACTGACTTTAGGCGCTGACCTAGTTATTCATTC
TGCAACAAAGTACATTGCTGGACACAACGATGTTATTGGAGGATGCGTCAGTGGCAGAGA
TGAGTTGGTTTCCAAAGTCCGTATTTATCACCATGTGGTTGGTGGTGTTCTAAACCCGAA
TGCTGCGTACCTTATCCTTCGAGGCATGAAAACACTTCATCTCCGTGTGCAATGTCAGAA
TAACACTGCTCTTCGGATGGCCCAGTTTTTAGAGGAACATCTAAAGATTGCCCGTGTCTA
CTATCCTGGCTTGCCTAGCCACCCTGAACATCACATTGCCAAGAGTCAAATGACTGGCTT
TGGTGGTGTGGTTAGTTTTGAGGTTGCTGGAGACTTTGATGCCACAAGGAAATTCATCGA
TTCTGTTAAGATACCCTATCATGCCCCTTCTTTCGGAGGCTGTGAGAGCATAATTGATCA
GCCTGCTATCATGTCCTACTGGGATTCAAAGGAGCAGAGGGACATCTATGGGATCAAGGA
CAACCTGATCAGGTTCAGCATTGGAGTGGAGGATTTTGAGGACCTTAAGAATGATCTTGT
TCAGGCCCTCGAGAAGATATAAGCTCCAATCCATTTGCATTAATAAAGTTATGAGGTGAT
GGTTGTCTGGATCTTGTAGAGATTTGTGATGATACATGAGCTGTTGACTGCGATTAAGTT
CTCTTGTGCTTATT