Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d047149_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:9:120108014:120109480:1 gene:Zm00001d047149 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	ATGCCCGAGATGAAGGCCGCCACTGCGCTGGGGAGCTGGCTGCTCCCGGCTGCGCCTGCC ATTCGCCCCACACTGGTGAATCTCAGATCCCGGGGGTTCTGCAGTCATGGTTATTTCCCC TCGGCGTCCCGGATTTCTTGCTCATCAGAGTTATCTGATAGCGATAGAGGTCTCGCCAAG GAGATGGAGTCAGAATTCAGTGACGAGATATGTGCCGAGAATGGTGCTGAAGAGGACGAT GAAACAGAGGATTTAATTTGGAGCAAAGAAGAGATCGATGCTATTTCGGCGCTCTTCGAC CGGCCGATGCGCCAGAAGCCCCTGAAGCCGCGAAACCCCGCGAGGCAGAGGGCGCTTCCA TTGCCACTGCCGCACAAGACGAGGCTGCCCGTGGCTCCTGCGCCGAAGCAGCACGTCCGC CTCGCTGCAAGAGCGGGGCTCTCTTCTCGTGCTTGCTTCAGCGACCAGGTGCGCAAGAAA CCGGAGTTCCTTCTCGGGATTGCCCGGGAGATCGCAGCGCTTCCTCCCGAGCACGACGTC TCCACGGTGCTCGACCGTTGGGCGAGGTTCCTCCGGAAAGGCTCCCTGTCACTTACCATT CGTGAGCTCGGGCACATGGGGCTCCCCGAGCGCGCGCTCCAGACACTGTGCTGGGCCCAG AGGCAGAAAGCTGTGCCGTTGTTCCCTGACGATCGTGTTCTTGCTTCGGCCATCGAGGTT TTGGCACGCTTTGAACGGCTCAGAGTGGAGTCTGCGCTGGAGCAATGTGTGCCCACGGCC AGCCGTGCCGTTCTCGAGGCCATGGCGAGCGGGTTCATCAGGGCGGGGAAAGTAGACCGC GTGCGCAAGCTCCTGGAACTTGCAAGGATCAATAACAGGACGCTGCACCCCAGCATCTAC GTGAAGTTGATGTTGGAAGCCACCCGGACACCTGAAGGCTACGGGCTTGCGTCGGCACTG GTTGATGAGCTTGGCGAGAGGCCGGAGTTGGAGTTGCGTCCACAGGACTGCACGGCTGTC ATGAAGGTCTGCATAAGGCTCCGACGGTACGCAGCCGTGGAGAGCCTTTTCAGCTGGTTC AGGGGGGCCATTGGGAGCCCCACCGTGGTGATGTACACGACGGTGATCCACAGCCGGTGC CGTGACGGGAGGCACCGAGAGGCACTGTCCCTGGTGTGGGAAATGGAGCAGGCAGGCTGC CTGCTTGATCTGCCGGCCTACCGAGTTATCGTCAAGCTATGCGTGGCATTGCACGATCCG GGGAGGGCTCTCCGCTATCTGTCAAGGATGAAGGAGGCTGGTTTTATTCCAACTGGCGAC ATGTACGACAGTCTGATCGAGGGCTATTTGGCAGATGGGAGGCTGGCCAAGTGCCGACAG CTGATCAGAGATGCCGAGTCAGCCGGTGTGAAGCTGGATAGGAGGCTGCTTTCGCGGTTG TCTGAAACTGGAGGCAGACATCCTTAG

Peptide Sequence

PEP ID	Zm00001d047149_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:9:120108014:120109480:1 gene:Zm00001d047149 transcript:Zm00001d047149_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	MPEMKAATALGSWLLPAAPAIRPTLVNLRSRGFCSHGYFPSASRISCSSELSDSDRGLAK EMESEFSDEICAENGAEEDDETEDLIWSKEEIDAISALFDRPMRQKPLKPRNPARQRALP LPLPHKTRLPVAPAPKQHVRLAARAGLSSRACFSDQVRKKPEFLLGIAREIAALPPEHDV STVLDRWARFLRKGSLSLTIRELGHMGLPERALQTLCWAQRQKAVPLFPDDRVLASAIEV LARFERLRVESALEQCVPTASRAVLEAMASGFIRAGKVDRVRKLLELARINNRTLHPSIY VKLMLEATRTPEGYGLASALVDELGERPELELRPQDCTAVMKVCIRLRRYAAVESLFSWF RGAIGSPTVVMYTTVIHSRCRDGRHREALSLVWEMEQAGCLLDLPAYRVIVKLCVALHDP GRALRYLSRMKEAGFIPTGDMYDSLIEGYLADGRLAKCRQLIRDAESAGVKLDRRLLSRL SETGGRHP

Transcript Sequence

Transcript ID	Zm00001d047149_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:120108014:120109480:1 gene:Zm00001d047149 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	ATGCCCGAGATGAAGGCCGCCACTGCGCTGGGGAGCTGGCTGCTCCCGGCTGCGCCTGCC ATTCGCCCCACACTGGTGAATCTCAGATCCCGGGGGTTCTGCAGTCATGGTTATTTCCCC TCGGCGTCCCGGATTTCTTGCTCATCAGAGTTATCTGATAGCGATAGAGGTCTCGCCAAG GAGATGGAGTCAGAATTCAGTGACGAGATATGTGCCGAGAATGGTGCTGAAGAGGACGAT GAAACAGAGGATTTAATTTGGAGCAAAGAAGAGATCGATGCTATTTCGGCGCTCTTCGAC CGGCCGATGCGCCAGAAGCCCCTGAAGCCGCGAAACCCCGCGAGGCAGAGGGCGCTTCCA TTGCCACTGCCGCACAAGACGAGGCTGCCCGTGGCTCCTGCGCCGAAGCAGCACGTCCGC CTCGCTGCAAGAGCGGGGCTCTCTTCTCGTGCTTGCTTCAGCGACCAGGTGCGCAAGAAA CCGGAGTTCCTTCTCGGGATTGCCCGGGAGATCGCAGCGCTTCCTCCCGAGCACGACGTC TCCACGGTGCTCGACCGTTGGGCGAGGTTCCTCCGGAAAGGCTCCCTGTCACTTACCATT CGTGAGCTCGGGCACATGGGGCTCCCCGAGCGCGCGCTCCAGACACTGTGCTGGGCCCAG AGGCAGAAAGCTGTGCCGTTGTTCCCTGACGATCGTGTTCTTGCTTCGGCCATCGAGGTT TTGGCACGCTTTGAACGGCTCAGAGTGGAGTCTGCGCTGGAGCAATGTGTGCCCACGGCC AGCCGTGCCGTTCTCGAGGCCATGGCGAGCGGGTTCATCAGGGCGGGGAAAGTAGACCGC GTGCGCAAGCTCCTGGAACTTGCAAGGATCAATAACAGGACGCTGCACCCCAGCATCTAC GTGAAGTTGATGTTGGAAGCCACCCGGACACCTGAAGGCTACGGGCTTGCGTCGGCACTG GTTGATGAGCTTGGCGAGAGGCCGGAGTTGGAGTTGCGTCCACAGGACTGCACGGCTGTC ATGAAGGTCTGCATAAGGCTCCGACGGTACGCAGCCGTGGAGAGCCTTTTCAGCTGGTTC AGGGGGGCCATTGGGAGCCCCACCGTGGTGATGTACACGACGGTGATCCACAGCCGGTGC CGTGACGGGAGGCACCGAGAGGCACTGTCCCTGGTGTGGGAAATGGAGCAGGCAGGCTGC CTGCTTGATCTGCCGGCCTACCGAGTTATCGTCAAGCTATGCGTGGCATTGCACGATCCG GGGAGGGCTCTCCGCTATCTGTCAAGGATGAAGGAGGCTGGTTTTATTCCAACTGGCGAC ATGTACGACAGTCTGATCGAGGGCTATTTGGCAGATGGGAGGCTGGCCAAGTGCCGACAG CTGATCAGAGATGCCGAGTCAGCCGGTGTGAAGCTGGATAGGAGGCTGCTTTCGCGGTTG TCTGAAACTGGAGGCAGACATCCTTAG