Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d047130_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:9:119474567:119477638:1 gene:Zm00001d047130 gene_biotype:protein_coding transcript_biotype:protein_coding description:Translocase of chloroplast 120 chloroplastic
Sequence

ATGGAGAACGGCGGCGGCGTCAGGGAAGGGCGCCCGGAGCATCGGGCGGGCGAGAACGGC
GGAGTCGCCGCGGAGGAGGAATCCGTCTTGAAGGCAGCCACTTTGGCGGGTGAGGGCAAT
TGTGTTGTGGCGGTGGAGGTCTGGGATGAGGGGGACGTGCCGCTGGGGCAGGATGGTGGC
GGAGATGAGGCTGGGGAAGAAAACCGGGGCCCCGGAGAAGGTGCAGTGGAGTCTGCGGTG
GTGACGGGCGATCACCAGCCATTGGTGACGCCGAACACCAGAGTGGCCGGACAGCGTGGG
GCAGAGAAGTGGGACGAGGACGACACTCCCAGTTTCGTAGATGTGGAGGAAAGTTTTGCT
GATGATGTGAATCAAGACCATGTGAATGAGAATGTCATGGGGCAATCTTTCAGGGAGTAC
ATGGTCACATCTGTTTTGGCTGATCGTGAAAAGGAGAGGTTAGACAACGACCACAATTTT
TTTTCAAATCCTGGTGACAAGGCTGAGGTCGCTGCACATTCTGGGAGCGAGTATGAAGAT
GTAAAAGGTGGTACTTTGGCGCATCAAAGCAAAAATCATCCAGGGAAGAGCACAGAAGAG
ATTGCTTCCTCTCATAGCAGGCCAGAGTTGGTCACAAATTCTGCAGCTGAGCCTGCTGTT
GTAATTGAGGAGTTGGATGACTCAAGCTCCTCAGATGATGAGAATACTGCGACCTCTGCT
CCCCCTGCACAATCCTCAAGTGGGAGTTCTACATCTGCACAACCCAGCAGTGCTGCTTCT
GCTCGTTCTACTAATGGTCCCTCTCTGATATCTCGTCCTGCTGGCCTTGGATCATCCTCT
TCCCTATCGCAGCCTCCTGCCCGTTCTGTTCAACAGGTCCGTGCCAGCAGGCCAGCCGCT
GTGGATAAGGGAACCCAGGAGGCTACTGAGTCTGCCGAGGATGATAGAGATGAGAATGAT
GATATCCATGAAAAACTTCAAATGATCCGGGTTAAGTTTCTTCGCCTCGCTGGCAGGTTG
GGGCAAACATCTCATAACATGGTCGTTTCACAGGTTCTGTACCGGCTTGGGCTGGCAGAA
CAACTTAGAAGAACTGCTAATGGGACGTTTAGCATTGACCGTGCGAGAGAGATGGCAGAA
CGTCTTGAAGCTGCTGGAAATGAGCCCCTTGATTTTTCATGCACCATTTTGGTTCTTGGT
AAAACTGGGGTCGGTAAGAGTGCTACCATTAATTCAATTTTTGATGATATCAGGTTGGAT
ACAAATGCCTTTGATTCTAGTACTATGAAGGTTCAAGTAGTTGGTACGGTTGAGGGAATC
AAAGTAAAAGTCATCGATACTCCTGGACTTTCCTGTTCATCTTTTGAACAACACCACAAC
CAGAAGGTTCTCAACTCTGTCAAGAGACTTATTAGCAGAAACCCTCCGGATATTGTTCTT
TATTTTGATAGGTTGGATATGCAGAGCAGGGACAACGGTGATGTCCCTCTGCTGCAAACT
ATCACGAAAGTGTTCGGAGCATCGGTTTGGTTTAATGCCATTGTCGTGTTAACTCATGCT
GCGTCTGCACCACCAGATGGGCAGAATGGAATTCCTCTGAGCTATGAGATGTTTGTCACC
CAGAGATCTCACGTAGTGCAACAAGCTATAAGGCAAGCTGCTGGTGATGGACGTCTTATG
AATCCGGTATCCCTAGTGGAAAACCACTCAGCATGCAGGACAAATAGAGCTGGCCAGAGG
GTATTGCCAAATGGACAAGTCTGGAAGCCACAGCTATTGCTGCTTTGTTTTGCTTCAAAG
GTGTTAGCAGAAGCCAATGTGCTTCTCAAGTTGCAGGATAGTCCCATTGGTAAACTTTCT
CATACAAGGATTCCTCCATTGCCTTTCCTCCTCTCTTCCCTTCTTCAGTCTCGTGCCCCA
CTGAAGTTACCAGAGGAGCAATTTGGTGGTGATGATGATGATCTTGAAGACGATTTGGCA
GACGATTCTGATTCAGATGATGGTTCGGATTGTGATGATTTACCTCCATTTAAGCGTCTC
ACAAAAGCTCAGCTTGCCAAGCTGAACAATGAGCAGAGGAAGGCCTACCTTGAGGAGCTA
GATTACAGAGAGAAGTTGTTCTACCGAAAACAGCTGAAAGAGGAAAGCAAGCACCGTAAA
TTGATGAAGAAAATGGCAGCAGAAGCCAGTGCTCGAGGAACTGATTTCAGCAACAGCAAC
CTAGAAGATGATTCTAATACTCCAACTAATGTTTCTGTGCCCATGCCTGACATGGTACTA
CCCTCATCTTTTGATTCTGACTATCCTACCCATCGCTATCGTTTTCTGGATACACCAAGT
GAATGGCTTATCAGACCTGTATTGGAAACCCAGGGCTGGGACCATGATGTTGGTTATGAG
GGACTTAATGTTGAAAGGTTGTTTGCTGTAAAAGGTAAAGTTCCTCTATCCGTGTCTGGC
CAGCTTACAAAAGACAAGAAGGATTGCTCCCTGCAAATGGAGGTTGCAAGTTCAATTAAG
CATGCTGAGGGTAAGACTACTTCATTTGGGCTTGATTTGCAGTCTGTCGGCAAGGATATG
GCATACACAATTCGTGGCGAATCGAGATTTAAGAACTTCAGGCGCAACAATACAGCTGCT
GGGATATCTGCCACGCTTCTTGGGGACTCAGTATCAGCTGGTCTGAAGATTGAGGACAAA
CTGATAGTGAACAAGCAGCTCAGGGTCCTGGTTAGCAGTGGGGCCATGAGTGGGAGGGGA
GATGTGGCCTATGGAGGCCGCCTCGAAGCAATAAGGGACAAAAATTACCCGATTGGGCGG
TTGCTTTCAACTATCGCGTTGTCTGTTGTGGATTGGCACGGGGATCTGGCAATTGGCTGC
AACATCCAGTCTCAGATCCCCGCTGGAAGAGCTAGCAACTTGGTTGGCCACGCCAATCTA
AGCAACAAGGGGACTGGCCAAGTCGGGATTCGTCTGAACAGCTCGGAACATCTTGAGATC
GCACTCGTTGCGCTCGTGCCGATATTTCAGAACATCATGAAGCTGTTACAGAATTACTTA
GAATCCGGCTAG

Peptide Sequence

PEP ID

Zm00001d047130_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:9:119474567:119477638:1 gene:Zm00001d047130 transcript:Zm00001d047130_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Translocase of chloroplast 120 chloroplastic
Sequence

MENGGGVREGRPEHRAGENGGVAAEEESVLKAATLAGEGNCVVAVEVWDEGDVPLGQDGG
GDEAGEENRGPGEGAVESAVVTGDHQPLVTPNTRVAGQRGAEKWDEDDTPSFVDVEESFA
DDVNQDHVNENVMGQSFREYMVTSVLADREKERLDNDHNFFSNPGDKAEVAAHSGSEYED
VKGGTLAHQSKNHPGKSTEEIASSHSRPELVTNSAAEPAVVIEELDDSSSSDDENTATSA
PPAQSSSGSSTSAQPSSAASARSTNGPSLISRPAGLGSSSSLSQPPARSVQQVRASRPAA
VDKGTQEATESAEDDRDENDDIHEKLQMIRVKFLRLAGRLGQTSHNMVVSQVLYRLGLAE
QLRRTANGTFSIDRAREMAERLEAAGNEPLDFSCTILVLGKTGVGKSATINSIFDDIRLD
TNAFDSSTMKVQVVGTVEGIKVKVIDTPGLSCSSFEQHHNQKVLNSVKRLISRNPPDIVL
YFDRLDMQSRDNGDVPLLQTITKVFGASVWFNAIVVLTHAASAPPDGQNGIPLSYEMFVT
QRSHVVQQAIRQAAGDGRLMNPVSLVENHSACRTNRAGQRVLPNGQVWKPQLLLLCFASK
VLAEANVLLKLQDSPIGKLSHTRIPPLPFLLSSLLQSRAPLKLPEEQFGGDDDDLEDDLA
DDSDSDDGSDCDDLPPFKRLTKAQLAKLNNEQRKAYLEELDYREKLFYRKQLKEESKHRK
LMKKMAAEASARGTDFSNSNLEDDSNTPTNVSVPMPDMVLPSSFDSDYPTHRYRFLDTPS
EWLIRPVLETQGWDHDVGYEGLNVERLFAVKGKVPLSVSGQLTKDKKDCSLQMEVASSIK
HAEGKTTSFGLDLQSVGKDMAYTIRGESRFKNFRRNNTAAGISATLLGDSVSAGLKIEDK
LIVNKQLRVLVSSGAMSGRGDVAYGGRLEAIRDKNYPIGRLLSTIALSVVDWHGDLAIGC
NIQSQIPAGRASNLVGHANLSNKGTGQVGIRLNSSEHLEIALVALVPIFQNIMKLLQNYL
ESG

Transcript Sequence

Transcript ID

Zm00001d047130_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:119474567:119477638:1 gene:Zm00001d047130 gene_biotype:protein_coding transcript_biotype:protein_coding description:Translocase of chloroplast 120 chloroplastic
Sequence

ATGGAGAACGGCGGCGGCGTCAGGGAAGGGCGCCCGGAGCATCGGGCGGGCGAGAACGGC
GGAGTCGCCGCGGAGGAGGAATCCGTCTTGAAGGCAGCCACTTTGGCGGGTGAGGGCAAT
TGTGTTGTGGCGGTGGAGGTCTGGGATGAGGGGGACGTGCCGCTGGGGCAGGATGGTGGC
GGAGATGAGGCTGGGGAAGAAAACCGGGGCCCCGGAGAAGGTGCAGTGGAGTCTGCGGTG
GTGACGGGCGATCACCAGCCATTGGTGACGCCGAACACCAGAGTGGCCGGACAGCGTGGG
GCAGAGAAGTGGGACGAGGACGACACTCCCAGTTTCGTAGATGTGGAGGAAAGTTTTGCT
GATGATGTGAATCAAGACCATGTGAATGAGAATGTCATGGGGCAATCTTTCAGGGAGTAC
ATGGTCACATCTGTTTTGGCTGATCGTGAAAAGGAGAGGTTAGACAACGACCACAATTTT
TTTTCAAATCCTGGTGACAAGGCTGAGGTCGCTGCACATTCTGGGAGCGAGTATGAAGAT
GTAAAAGGTGGTACTTTGGCGCATCAAAGCAAAAATCATCCAGGGAAGAGCACAGAAGAG
ATTGCTTCCTCTCATAGCAGGCCAGAGTTGGTCACAAATTCTGCAGCTGAGCCTGCTGTT
GTAATTGAGGAGTTGGATGACTCAAGCTCCTCAGATGATGAGAATACTGCGACCTCTGCT
CCCCCTGCACAATCCTCAAGTGGGAGTTCTACATCTGCACAACCCAGCAGTGCTGCTTCT
GCTCGTTCTACTAATGGTCCCTCTCTGATATCTCGTCCTGCTGGCCTTGGATCATCCTCT
TCCCTATCGCAGCCTCCTGCCCGTTCTGTTCAACAGGTCCGTGCCAGCAGGCCAGCCGCT
GTGGATAAGGGAACCCAGGAGGCTACTGAGTCTGCCGAGGATGATAGAGATGAGAATGAT
GATATCCATGAAAAACTTCAAATGATCCGGGTTAAGTTTCTTCGCCTCGCTGGCAGGTTG
GGGCAAACATCTCATAACATGGTCGTTTCACAGGTTCTGTACCGGCTTGGGCTGGCAGAA
CAACTTAGAAGAACTGCTAATGGGACGTTTAGCATTGACCGTGCGAGAGAGATGGCAGAA
CGTCTTGAAGCTGCTGGAAATGAGCCCCTTGATTTTTCATGCACCATTTTGGTTCTTGGT
AAAACTGGGGTCGGTAAGAGTGCTACCATTAATTCAATTTTTGATGATATCAGGTTGGAT
ACAAATGCCTTTGATTCTAGTACTATGAAGGTTCAAGTAGTTGGTACGGTTGAGGGAATC
AAAGTAAAAGTCATCGATACTCCTGGACTTTCCTGTTCATCTTTTGAACAACACCACAAC
CAGAAGGTTCTCAACTCTGTCAAGAGACTTATTAGCAGAAACCCTCCGGATATTGTTCTT
TATTTTGATAGGTTGGATATGCAGAGCAGGGACAACGGTGATGTCCCTCTGCTGCAAACT
ATCACGAAAGTGTTCGGAGCATCGGTTTGGTTTAATGCCATTGTCGTGTTAACTCATGCT
GCGTCTGCACCACCAGATGGGCAGAATGGAATTCCTCTGAGCTATGAGATGTTTGTCACC
CAGAGATCTCACGTAGTGCAACAAGCTATAAGGCAAGCTGCTGGTGATGGACGTCTTATG
AATCCGGTATCCCTAGTGGAAAACCACTCAGCATGCAGGACAAATAGAGCTGGCCAGAGG
GTATTGCCAAATGGACAAGTCTGGAAGCCACAGCTATTGCTGCTTTGTTTTGCTTCAAAG
GTGTTAGCAGAAGCCAATGTGCTTCTCAAGTTGCAGGATAGTCCCATTGGTAAACTTTCT
CATACAAGGATTCCTCCATTGCCTTTCCTCCTCTCTTCCCTTCTTCAGTCTCGTGCCCCA
CTGAAGTTACCAGAGGAGCAATTTGGTGGTGATGATGATGATCTTGAAGACGATTTGGCA
GACGATTCTGATTCAGATGATGGTTCGGATTGTGATGATTTACCTCCATTTAAGCGTCTC
ACAAAAGCTCAGCTTGCCAAGCTGAACAATGAGCAGAGGAAGGCCTACCTTGAGGAGCTA
GATTACAGAGAGAAGTTGTTCTACCGAAAACAGCTGAAAGAGGAAAGCAAGCACCGTAAA
TTGATGAAGAAAATGGCAGCAGAAGCCAGTGCTCGAGGAACTGATTTCAGCAACAGCAAC
CTAGAAGATGATTCTAATACTCCAACTAATGTTTCTGTGCCCATGCCTGACATGGTACTA
CCCTCATCTTTTGATTCTGACTATCCTACCCATCGCTATCGTTTTCTGGATACACCAAGT
GAATGGCTTATCAGACCTGTATTGGAAACCCAGGGCTGGGACCATGATGTTGGTTATGAG
GGACTTAATGTTGAAAGGTTGTTTGCTGTAAAAGGTAAAGTTCCTCTATCCGTGTCTGGC
CAGCTTACAAAAGACAAGAAGGATTGCTCCCTGCAAATGGAGGTTGCAAGTTCAATTAAG
CATGCTGAGGGTAAGACTACTTCATTTGGGCTTGATTTGCAGTCTGTCGGCAAGGATATG
GCATACACAATTCGTGGCGAATCGAGATTTAAGAACTTCAGGCGCAACAATACAGCTGCT
GGGATATCTGCCACGCTTCTTGGGGACTCAGTATCAGCTGGTCTGAAGATTGAGGACAAA
CTGATAGTGAACAAGCAGCTCAGGGTCCTGGTTAGCAGTGGGGCCATGAGTGGGAGGGGA
GATGTGGCCTATGGAGGCCGCCTCGAAGCAATAAGGGACAAAAATTACCCGATTGGGCGG
TTGCTTTCAACTATCGCGTTGTCTGTTGTGGATTGGCACGGGGATCTGGCAATTGGCTGC
AACATCCAGTCTCAGATCCCCGCTGGAAGAGCTAGCAACTTGGTTGGCCACGCCAATCTA
AGCAACAAGGGGACTGGCCAAGTCGGGATTCGTCTGAACAGCTCGGAACATCTTGAGATC
GCACTCGTTGCGCTCGTGCCGATATTTCAGAACATCATGAAGCTGTTACAGAATTACTTA
GAATCCGGCTAG