Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d047125_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:9:119386578:119389448:1 gene:Zm00001d047125 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectin acetylesterase 9
Sequence

ATGAATCCAGACTTTTACAACTGGAACCGTGTGAAGCTGCGTTACTGCGACGGCGGGTCC
TTCATGGGCGATTCAGCAGTGTATATAAACAGCTCCTCGGTGCTCTACTTCAGTGGCCAG
AGGATATGGGACGCTATTGTCGCCGATCTGCTCAGGAAGGGACTGGCGAGAGCCGACAAG
GTTCTGCTCTCAGGCTGTTCGGCAGGAGGCCTAGCTACGTTCTTCCACTGCGACGGCCTT
AAGCAGCGGCTTGGAGCCGCAGCCACGGTGAAATGCCTGAGCGACGCCGGATTTTTCCTT
GATCTGAGTGACATTTCTGGGAGCAACACCATAAGGCAATTCTTTAGCAGCCTAGTATCC
CTGCAGGGAATCCAGAAGAATTTGAACATGGACTGCCTGAGTTCAACTTCAACAGACAAT
GCATACCTGTGTTTCTTTCCACAGTTCGCGCTTGCGAACATCCGAACCCCGTTTTTCATC
TTGAATTCAGCTTATGATGTATACCAGTTCCACCACATTCTGGTGCCGCCTTCGTCTGAT
CCTGGAGGCCATTGGAGCCGCTGCAAGTCGGATCCTGGTGGATGCAACGCAACACAGATC
GCAACCCTCCAAGGACTGAGAAGTGGAATGCTGACATCTCTGAGACAGTTTAAAAGCAAA
CCGGAGGCAGGGATGTTCATCAACTCCTGCTTCGCGCATTGCCAGAGTGAGCTGCAGGAC
ACATGGTTCGCACCAAATTCTCCATCCATAGATAACAAGAAAATTGCAGAGGTGGTAGGT
GATTGGTACTTCGAAAGAGGAGCTGCCGTGGAGATTGACTGCGCCTATCCCTGTGATTCA
ACTTGTCGCAACCTTATACCAATTGATAAGAATGGGTTCGCTGGCGCATGA

Peptide Sequence

PEP ID

Zm00001d047125_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:9:119386578:119389448:1 gene:Zm00001d047125 transcript:Zm00001d047125_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectin acetylesterase 9
Sequence

MNPDFYNWNRVKLRYCDGGSFMGDSAVYINSSSVLYFSGQRIWDAIVADLLRKGLARADK
VLLSGCSAGGLATFFHCDGLKQRLGAAATVKCLSDAGFFLDLSDISGSNTIRQFFSSLVS
LQGIQKNLNMDCLSSTSTDNAYLCFFPQFALANIRTPFFILNSAYDVYQFHHILVPPSSD
PGGHWSRCKSDPGGCNATQIATLQGLRSGMLTSLRQFKSKPEAGMFINSCFAHCQSELQD
TWFAPNSPSIDNKKIAEVVGDWYFERGAAVEIDCAYPCDSTCRNLIPIDKNGFAGA

Transcript Sequence

Transcript ID

Zm00001d047125_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:119386578:119389448:1 gene:Zm00001d047125 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectin acetylesterase 9
Sequence

GGCCGAGTCCTTCTCCGGCATCCTCAGCAACCGTCCGGCCATGAATCCAGACTTTTACAA
CTGGAACCGTGTGAAGCTGCGTTACTGCGACGGCGGGTCCTTCATGGGCGATTCAGCAGT
GTATATAAACAGCTCCTCGGTGCTCTACTTCAGTGGCCAGAGGATATGGGACGCTATTGT
CGCCGATCTGCTCAGGAAGGGACTGGCGAGAGCCGACAAGGTTCTGCTCTCAGGCTGTTC
GGCAGGAGGCCTAGCTACGTTCTTCCACTGCGACGGCCTTAAGCAGCGGCTTGGAGCCGC
AGCCACGGTGAAATGCCTGAGCGACGCCGGATTTTTCCTTGATCTGAGTGACATTTCTGG
GAGCAACACCATAAGGCAATTCTTTAGCAGCCTAGTATCCCTGCAGGGAATCCAGAAGAA
TTTGAACATGGACTGCCTGAGTTCAACTTCAACAGACAATGCATACCTGTGTTTCTTTCC
ACAGTTCGCGCTTGCGAACATCCGAACCCCGTTTTTCATCTTGAATTCAGCTTATGATGT
ATACCAGTTCCACCACATTCTGGTGCCGCCTTCGTCTGATCCTGGAGGCCATTGGAGCCG
CTGCAAGTCGGATCCTGGTGGATGCAACGCAACACAGATCGCAACCCTCCAAGGACTGAG
AAGTGGAATGCTGACATCTCTGAGACAGTTTAAAAGCAAACCGGAGGCAGGGATGTTCAT
CAACTCCTGCTTCGCGCATTGCCAGAGTGAGCTGCAGGACACATGGTTCGCACCAAATTC
TCCATCCATAGATAACAAGAAAATTGCAGAGGTGGTAGGTGATTGGTACTTCGAAAGAGG
AGCTGCCGTGGAGATTGACTGCGCCTATCCCTGTGATTCAACTTGTCGCAACCTTATACC
AATTGATAAGAATGGGTTCGCTGGCGCATGAAGTGGACCTCGATTCAGAGCCATCAACAT
TTGCCCAAACATGATTGATTACCTGTATATATTGCACATTGCATCACAATTCAACTTGGC
ACATGGATGAATAAAATGTAGAGCCAGTGCTCTCGAAAGATATGCAAAATTTGGCATGTT
TTTCC