Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d047124_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:9:119370184:119372706:-1 gene:Zm00001d047124 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proline oxidase

Sequence

ATGGCCATCGCCTCCCGTGCCACGAAGCGCGCGCTGTCCACCTTCGCCGCGGCCAAGCTC
CCGGAGGAGGCGATCGCCGCCACCGCCGCGGTGCCGGTGCCGCTGGCGCCCGCGCCCGCG
TCGTCCGAGAGGGCGCTGCTGCAGTTCGAGGACACGGGGCGGCTGTTCGCGGGGGAGCCG
ACGCCGGCGCTGCTGCGCACGCTCGCCGCGCTGCAGGCGCTGTCCGTGGGCCCGCTGGTG
GACGCGGCCACTGCGGCGCTGCGGTCGCCGGCGGTGGCCGGCAGCGCGCTGGGCCGGGCC
GCCGCCAGGGCCACGGCGTACCGGCACTTCTGCGCGGGCGAGACCGCCGGCGAGGCCGCG
GCGGCCGTGCGCCGGCTGTGGCGCGGCGGCATGGGCGGGATCCTCGACTACGGGATCGAG
GACGCCGAGGACGGCGGCGCGTGCGACCGTAACGCCGCCGGGTTCGCCTCCGCCGTCGAC
GTCGCCGCCAAGCTGCCTCCGGGCTCGGCGAGCGTGTGCATCAAGATCACGGCGCTGTGC
CCGATCGCGCTGCTGGAGAAGGCGAGCGACCTGCTGCGGTGGCAGAAGAGGCACCCGTCG
CTGAACCTGCCGTGGAAGACGCACGACTTCCCGATCCTGTCGGACTCGAGCCCGCTGCAC
CTCACGGCGTCGGAGCCGCCGGCGCTGTCGGCGGAGGAGGAGAGGGAGCTGGAGCTGGCG
CACGAGCGGGTGCTGGCGGTGTGCGCGCGGTGCGCGGAGCGCGGCGTGCCGCTGCTGGTG
GACGCGGAGTACGCGGCGGTGCAGCCGGCGATCGACTACCTCACGCTCGCCGGCGCGCTG
GCGTGCAACGCCGAGCGCTCCATCGTGCACGGCACGGTCCAGGCGTACCTACGCGACGCG
CGGGAGCGGCTGGAGACCATGGCGCGCGGCGTGGAGCGCGCGCGCGTGCGCCTGGGGGTC
AAGCTGGTGCGCGGCGCGTACCTGGCCCGCGAGGCCCGGGTCGCGGCCGCCCTCGGCGTG
CCGTCGCCCGTCCACGGCAGCATCCGGGAGACCCACGACTGCTACAACGGATGCGCCGCC
TTCCTCCTCGACCGCGTCCGCCGCGGGTCCGCCTCCGTCGTGCTCGCCACCCACAATGTG
GAGTCAGGCCAACTCGCGGCGGCGCGTGCTGAGGAGCTGGGGATCCCCAGGGGAGACCGC
AACCTGCAGTTCGCGCAGCTGATGGGCATGGCGGACGGGCTGTCGCTGGGCCTCCGCAAC
GCCGGGTTCCAGGTCAGCAAGTACCTGCCGTACGGGCCGGTGGAGCAGATCGTCCCCTAC
CTCATCAGGCGCGCCGAGGAGAACAGGGGCCTCCTCTCCGCCTCCTCCTTCGACAGGCAG
CTGCTCCGGGAGGAGTTGGTGAGGAGGTTCAAGGCTGCGGTGCTGGGACGTGAGTGA

Peptide Sequence

PEP ID

Zm00001d047124_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:9:119370184:119372706:-1 gene:Zm00001d047124 transcript:Zm00001d047124_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proline oxidase

Sequence

MAIASRATKRALSTFAAAKLPEEAIAATAAVPVPLAPAPASSERALLQFEDTGRLFAGEP
TPALLRTLAALQALSVGPLVDAATAALRSPAVAGSALGRAAARATAYRHFCAGETAGEAA
AAVRRLWRGGMGGILDYGIEDAEDGGACDRNAAGFASAVDVAAKLPPGSASVCIKITALC
PIALLEKASDLLRWQKRHPSLNLPWKTHDFPILSDSSPLHLTASEPPALSAEEERELELA
HERVLAVCARCAERGVPLLVDAEYAAVQPAIDYLTLAGALACNAERSIVHGTVQAYLRDA
RERLETMARGVERARVRLGVKLVRGAYLAREARVAAALGVPSPVHGSIRETHDCYNGCAA
FLLDRVRRGSASVVLATHNVESGQLAAARAEELGIPRGDRNLQFAQLMGMADGLSLGLRN
AGFQVSKYLPYGPVEQIVPYLIRRAEENRGLLSASSFDRQLLREELVRRFKAAVLGRE

Transcript Sequence

Transcript ID

Zm00001d047124_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:119370184:119372706:-1 gene:Zm00001d047124 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proline oxidase

Sequence

GAGCCCGCTTCCTCCAATCTTGGACTCAGCTAAACCCGACACCTTTCCTCGAGGACCTTG
ACGAAAACAGCCGCCTTTTCCTTGCCGTTTCCCGTTTATATAAGTCGCTGCGCCGGGTTG
AATTCCATTGCATTGCATCCTCCTCCACTTCCTGCCTGCCTGCCTGCGTAGCTCGCACAC
CACAACCGCCGCGTTCTTCTTCTCTCGTCCCTAAGCAAGCGCCGCTGCTCCTCGGTTCTT
TCGCTCGATCCCGCAAGGCCCGTCCTTCCATGGCCATCGCCTCCCGTGCCACGAAGCGCG
CGCTGTCCACCTTCGCCGCGGCCAAGCTCCCGGAGGAGGCGATCGCCGCCACCGCCGCGG
TGCCGGTGCCGCTGGCGCCCGCGCCCGCGTCGTCCGAGAGGGCGCTGCTGCAGTTCGAGG
ACACGGGGCGGCTGTTCGCGGGGGAGCCGACGCCGGCGCTGCTGCGCACGCTCGCCGCGC
TGCAGGCGCTGTCCGTGGGCCCGCTGGTGGACGCGGCCACTGCGGCGCTGCGGTCGCCGG
CGGTGGCCGGCAGCGCGCTGGGCCGGGCCGCCGCCAGGGCCACGGCGTACCGGCACTTCT
GCGCGGGCGAGACCGCCGGCGAGGCCGCGGCGGCCGTGCGCCGGCTGTGGCGCGGCGGCA
TGGGCGGGATCCTCGACTACGGGATCGAGGACGCCGAGGACGGCGGCGCGTGCGACCGTA
ACGCCGCCGGGTTCGCCTCCGCCGTCGACGTCGCCGCCAAGCTGCCTCCGGGCTCGGCGA
GCGTGTGCATCAAGATCACGGCGCTGTGCCCGATCGCGCTGCTGGAGAAGGCGAGCGACC
TGCTGCGGTGGCAGAAGAGGCACCCGTCGCTGAACCTGCCGTGGAAGACGCACGACTTCC
CGATCCTGTCGGACTCGAGCCCGCTGCACCTCACGGCGTCGGAGCCGCCGGCGCTGTCGG
CGGAGGAGGAGAGGGAGCTGGAGCTGGCGCACGAGCGGGTGCTGGCGGTGTGCGCGCGGT
GCGCGGAGCGCGGCGTGCCGCTGCTGGTGGACGCGGAGTACGCGGCGGTGCAGCCGGCGA
TCGACTACCTCACGCTCGCCGGCGCGCTGGCGTGCAACGCCGAGCGCTCCATCGTGCACG
GCACGGTCCAGGCGTACCTACGCGACGCGCGGGAGCGGCTGGAGACCATGGCGCGCGGCG
TGGAGCGCGCGCGCGTGCGCCTGGGGGTCAAGCTGGTGCGCGGCGCGTACCTGGCCCGCG
AGGCCCGGGTCGCGGCCGCCCTCGGCGTGCCGTCGCCCGTCCACGGCAGCATCCGGGAGA
CCCACGACTGCTACAACGGATGCGCCGCCTTCCTCCTCGACCGCGTCCGCCGCGGGTCCG
CCTCCGTCGTGCTCGCCACCCACAATGTGGAGTCAGGCCAACTCGCGGCGGCGCGTGCTG
AGGAGCTGGGGATCCCCAGGGGAGACCGCAACCTGCAGTTCGCGCAGCTGATGGGCATGG
CGGACGGGCTGTCGCTGGGCCTCCGCAACGCCGGGTTCCAGGTCAGCAAGTACCTGCCGT
ACGGGCCGGTGGAGCAGATCGTCCCCTACCTCATCAGGCGCGCCGAGGAGAACAGGGGCC
TCCTCTCCGCCTCCTCCTTCGACAGGCAGCTGCTCCGGGAGGAGTTGGTGAGGAGGTTCA
AGGCTGCGGTGCTGGGACGTGAGTGAAGTGAACCTGCTGAGGCTACTCTGCTGTGAAGCT
GGGACAAGGGCCAGTTGAAGGCTAGAAGCTGTAAATACACCCTTCAACAGTCTTCAGACA
TTGATGTATCCGGGGCTTTCTTGAATAAATCGATTGAATGGAATAATGAGGCTTATCGAG
CTTAAACA