Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d047115_T004
CDS Infomation

cds chromosome:B73_RefGen_v4:9:119212752:119213476:-1 gene:Zm00001d047115 gene_biotype:protein_coding transcript_biotype:protein_coding description:extensin-like protein
Sequence

ATGGCTCCCAAGGTTGCGCTCTTCCTTGCCCTCGGCCTCCTCTTCGCTGCCGCCGCCCAT
GGCTGCGAACCCTACTGTCCTGGCCCAGTCGTCCCAACGCCGCCAGTCGTGCCGACGCCA
TCGTCGCACAGTCACGGGCGCTGCCCGATCGACGCGCTCAAGCTCAAGGTGTGCGCCAAC
GTGCTCGGCCTCGTCAAGGTCGGCCTGCCCCAACACCAGCAATGTTGCCCGCTGCTGGAG
GGGTTGGTGGACCTCGACGCCGCACTATGCCTCTGCACCGCCATCAAGGCCAACGTCCTC
GGCATCCACCTCAACGTGCCCCTTAGCCTCAACCTTATCCTCAACAACTGCGGCAAGTTG
CCCCAACTAAGCTTGGGATCTCTTGTGTGCTCCATCTCGTGA

Peptide Sequence

PEP ID

Zm00001d047115_P004
PEP Infomation

pep chromosome:B73_RefGen_v4:9:119212752:119213476:-1 gene:Zm00001d047115 transcript:Zm00001d047115_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:extensin-like protein
Sequence

MAPKVALFLALGLLFAAAAHGCEPYCPGPVVPTPPVVPTPSSHSHGRCPIDALKLKVCAN
VLGLVKVGLPQHQQCCPLLEGLVDLDAALCLCTAIKANVLGIHLNVPLSLNLILNNCGKL
PQLSLGSLVCSIS

Transcript Sequence

Transcript ID

Zm00001d047115_T004
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:119212752:119213476:-1 gene:Zm00001d047115 gene_biotype:protein_coding transcript_biotype:protein_coding description:extensin-like protein
Sequence

ATCCCAAAGAGCACGCAGCGCAGCACTGAGGCACCACTTCCTGCACTCACTGCTAGCTGC
TCACACCGTAGTAGTAACAGTCCATCACCCCAGGCACCACCAATGGCTCCCAAGGTTGCG
CTCTTCCTTGCCCTCGGCCTCCTCTTCGCTGCCGCCGCCCATGGCTGCGAACCCTACTGT
CCTGGCCCAGTCGTCCCAACGCCGCCAGTCGTGCCGACGCCATCGTCGCACAGTCACGGG
CGCTGCCCGATCGACGCGCTCAAGCTCAAGGTGTGCGCCAACGTGCTCGGCCTCGTCAAG
GTCGGCCTGCCCCAACACCAGCAATGTTGCCCGCTGCTGGAGGGGTTGGTGGACCTCGAC
GCCGCACTATGCCTCTGCACCGCCATCAAGGCCAACGTCCTCGGCATCCACCTCAACGTG
CCCCTTAGCCTCAACCTTATCCTCAACAACTGCGGCAAGTTGCCCCAACTAAGCTTGGGA
TCTCTTGTGTGCTCCATCTCGTGATTATATTTACAAGCATGTTGGCCTCTTGCAATATTA
GCGAATAAGTTTGTCGTTTCAAATTCTTTCGCTGTACCTATTTGAAATTTTAATGATCAA
TAAGAAATATTCGTGTTTTTTATTTTGAGAAAAAAGGAGATATGAATCATTCAGTTTCAG
TGAACTCATATGCATTAT