Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d047094_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:9:118434971:118436207:1 gene:Zm00001d047094 gene_biotype:protein_coding transcript_biotype:protein_coding description:Expansin-B4
Sequence

ATGGCCGTCGCGATCTCCATCAAGCTGGCCGCGCTCGCTGCGCTCGTCGTCTCCGTGTTC
GCCACGCACGGCGCTCGCGCGCAGCCGAGCTACTACAATGCCTCTGCCGCTCGCAGAGAA
CTGTACTACTCCAGCACCACCGGCGGCAGCTGGCTCCCGGCCAGGGCCACCTGGTACGGT
CGGCCCAACGGCGCCGGCCCCGACAACAACGGTGGCGGGTGTGGGTACAGCGGCACCAAC
ACGTACCCTTTCAACTCCATGACATCCTGTGGCAACCAGCCCTTGTTCAGGGACGGCAAA
GGCTGCGGCGCGTGCTACCAGATAAAATGCGTGAGCAAGAACAACGCTGCCTGCTCCGGC
GAGCCCAAGACGGTCATCATCACCGACGTGAACTACGACACCAAGGTCGCCCCCTACCAC
TTCGACCTCAGCGGCACGGCGTTCGGCGCCATGGCTAAGCCTGGGCTCAACGGCAAGCTC
CGCGACGCCGGCATCCTCGACATCCAGTTCAGGAGGGTGCCCTGCGACTACAAGGGCCTC
AACGTGAAGTTCCACGTGATGGGAGGCTGCAACCCGTTCTACTTCGCGGTGATCGTGTAC
TACGCCGGCAGCGATGGCGCCGTCGTGCAGGTGGACCTCAAGGAGGCCAACTCGCCGGCA
TGGATGCCGCTCTACGAGTCGTGGGGCGCCGTCTGGAGGATCGACCCCGGCCACCCGCTC
AAGGCGCCCCTCTCGCTGCGCGTCCGCAGCGACTCCGGCAAGACTCTGGTGGCCTACGAC
GTCATCCCGATCAACTGGAGGGGCAATGCCGATTACCGTACCATCGCTCAGTTCCACTGA

Peptide Sequence

PEP ID

Zm00001d047094_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:9:118434971:118436207:1 gene:Zm00001d047094 transcript:Zm00001d047094_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Expansin-B4
Sequence

MAVAISIKLAALAALVVSVFATHGARAQPSYYNASAARRELYYSSTTGGSWLPARATWYG
RPNGAGPDNNGGGCGYSGTNTYPFNSMTSCGNQPLFRDGKGCGACYQIKCVSKNNAACSG
EPKTVIITDVNYDTKVAPYHFDLSGTAFGAMAKPGLNGKLRDAGILDIQFRRVPCDYKGL
NVKFHVMGGCNPFYFAVIVYYAGSDGAVVQVDLKEANSPAWMPLYESWGAVWRIDPGHPL
KAPLSLRVRSDSGKTLVAYDVIPINWRGNADYRTIAQFH

Transcript Sequence

Transcript ID

Zm00001d047094_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:118434971:118436207:1 gene:Zm00001d047094 gene_biotype:protein_coding transcript_biotype:protein_coding description:Expansin-B4
Sequence

CGCTCCGACAAAAAAAACACCCAACACGTATATAGTGGAGTAGACAGTAACAGTACGACG
ATCCTGAGCTGAGATGGCCGTCGCGATCTCCATCAAGCTGGCCGCGCTCGCTGCGCTCGT
CGTCTCCGTGTTCGCCACGCACGGCGCTCGCGCGCAGCCGAGCTACTACAATGCCTCTGC
CGCTCGCAGAGAACTGTACTACTCCAGCACCACCGGCGGCAGCTGGCTCCCGGCCAGGGC
CACCTGGTACGGTCGGCCCAACGGCGCCGGCCCCGACAACAACGGTGGCGGGTGTGGGTA
CAGCGGCACCAACACGTACCCTTTCAACTCCATGACATCCTGTGGCAACCAGCCCTTGTT
CAGGGACGGCAAAGGCTGCGGCGCGTGCTACCAGATAAAATGCGTGAGCAAGAACAACGC
TGCCTGCTCCGGCGAGCCCAAGACGGTCATCATCACCGACGTGAACTACGACACCAAGGT
CGCCCCCTACCACTTCGACCTCAGCGGCACGGCGTTCGGCGCCATGGCTAAGCCTGGGCT
CAACGGCAAGCTCCGCGACGCCGGCATCCTCGACATCCAGTTCAGGAGGGTGCCCTGCGA
CTACAAGGGCCTCAACGTGAAGTTCCACGTGATGGGAGGCTGCAACCCGTTCTACTTCGC
GGTGATCGTGTACTACGCCGGCAGCGATGGCGCCGTCGTGCAGGTGGACCTCAAGGAGGC
CAACTCGCCGGCATGGATGCCGCTCTACGAGTCGTGGGGCGCCGTCTGGAGGATCGACCC
CGGCCACCCGCTCAAGGCGCCCCTCTCGCTGCGCGTCCGCAGCGACTCCGGCAAGACTCT
GGTGGCCTACGACGTCATCCCGATCAACTGGAGGGGCAATGCCGATTACCGTACCATCGC
TCAGTTCCACTGA