Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d047079_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:9:117680335:117689504:1 gene:Zm00001d047079 gene_biotype:protein_coding transcript_biotype:protein_coding description:G2484-1 protein
Sequence	ATGAAATCTGCTCCTGGTTCTGAGGAGACTAGTGCAGCAGGAGGTGATAGAAGCTTTTCA TTTGAGGTGGGAGCTCCACCCAATGTTGCTGAGAAAGCACATAGCTCTGTTTGGAGTCCT TTTCATTTGAAGAGTACTGAGACGGTCACAGAAAATCTTCAAGCTGGAAGTTCTTTGAAG GATACTAGTGATGATAGTAAGAAAACATCTACTATAGATGCTTGTAAAGAACAACTATCA GAAAGGAAAGTGGCTGAAAGTTCTGGGGGCAGCCCCCCAGACAACTCTAATATAGGCGGC AGCATTAAGAGCAGAAGTTCGCCACCGCAGCAGCATCCAATCCCTGAGTGTTCTGATTTA GTGAATTTTCCATTCACAGAGGCACAGCATTTGCAGCTACGCGCACAAATATTTGTTTAT GGAGCTCTTATTCAAGGAACGCCACCAGGAGAGGCTTACATGGTGGCAGCTTTTGGAGAA CCTGTAAGTGGTGGCAAACCTACATGGGAGGCTGCTTGGCGAGCTGCATTTGAAAGATTT CAGTATCAAAAATCACTTTGTATCAGTTTAGAGACCCCCACAAGTTCGCGTATAGGTAGT ACTGTGCCTGAGAAAGCTAGCAAGGGTACATCAATTACATCTGTGCCAGCTAGCAAAAGA GGTGGCAAAATTGTGGCGCCAGCACATCCTGCTGTAACCCTACACTCCCCAACTTCTAAC ATACCTTTTGGTAGTTCTACATTTAACCTGCAGCGAGGCACTCATCTGGATTTTAGCCAG GCAGTGTCACCATTTGCATATAATTCACACATGAGACATCTGTCTCCCGGTGTTGCCCCC TGGTATACTCAGAGCCCTGGTCCACGTTCTGCACCCTGGTTGATTTCACCACAAAACTTA ATATTTGATTCATCGATGCAACCAGCTATTCCTACAAATGAAACTGCAAATGGGGCGTCA TCCAAAAATATATCCATTTCACATACTGTTTCATCTGGTGTAGTTCTTCCCAGTCCAGCA CCTTCTATTGTTTCTTCTCCAACAGCAGTTGTGAATGATGGAAAACAGAAGGCTGTTTCT AGCTCTAAGTGTGGCACCACATCACAAAAGCCAAGAAAAAGAAAGAAAGCTTCAGTAAGT CCAGAACAGCAACCTGTCATTGCTTCTCCTCAGCTCAAAATGGACATGCCGTCTTTTACT CCTGCCATTAAGCACACAGCAGGATTTGCCTTATCCGGTAGCAAGCTTGTTCCTAAGACG GGTGAGATTGCCTCTGAACCTAACTACCAGGTCACTGGTGGTATGGATAGTGAGCAAAGA ATCATCTTTTCAGAAAAGATCCGTTGTGCAGTAGAACAATCAACTGCACAGGCTAAAGGT GCAAGCCTTGACTCAATGGAGGCAGTTAAGCACAAGGAAGGCGTATGGAGCAATCTATCC ACAATCTCAAGAAACAAGTTATCTCCAGAGGTCGAAGAGAAGCTTACCTCAGTTGCAGCA GCTGCTGAAGCAGCAGTTTCTGTTGCAAAGGCAGCTGCAGAAGCTGCCAAGATGGCGTCA GAGGCTGCATTGCAGGCGAAAATAATGGCAGAGGAAACTCTTAGCTCTTTTACATCTGTA ATGTCCATGCATCACGAAGTTGGTCAATCTGATGTCATTAGTAGTCCACTGATCTTGTCA AGTTCAACACCAGCATCATCCCTGAAAATTAAGGACAAGAGTCATGCCCCAGGTTCCATC ATTTCTGTGGCACGGGAGGCTGCTAGAAAGAGGGTTGAAGAGGCATCTGCAGCTGCAAAA CGTGCTGAAAACTTGGATGCCATATTGAAAGCTGCAGAGCTTGCCGCGGAGGCTGTGTTC AGGGCAGGAACCATTATTGGAATGGGAGAACCACTACCTTTTACCCTAAGAGAGCTTTTG GAAGCAGGGCCAAATGGCTATTGGAAGTCTGCAAGTGTAAGGAATAAATCTGGAAGTGGT AATGATAATCTAGTAACAGAAACATTGGAGGTAGATGCACCTGCTAACCCTAGCAAATCT GGCAGAAAGCGTGGTCGGAAACCTAAATATGATCAAGCACTACCGAATTCAGAGCCATTT TCAAACTGCAAAGAATTACAGCCATATGGAATACACTCAGGACATGGGGTTGTAGGAAAT GTTCCTGTCACTGTGCCAATGGATGGTACCAATGTTACATCACCAATAAGCATTGTCTGG AATGGCATTGAAAAGGGATCTGCAGTTGAGGTTTTATCTGACAAGGTTGGGTTTGGAGTA GCTTGGTTTTCTGCTAAGGTTATTGATATAAATGAAAATAATGCTTTTGTCAGCTATGAC AACCACAATGGAACTGGTCCTCGTGAAGAATGGGTGCCATTGAGACAAGAGGGGGATAAG CCGCCTCAGATACGTCTTGCACACCCTGCTACCCTCTCCAAATTCAAAACTAGGAAACGG CGCAGGGAAACAGCAGGCAGTTGTTTATGGGTCATTGGAGATCATGTAGACGCATGGGTC AATAATTGCTGTTGGCGAGAGGGAGTTATTTCTCAGAATTATGAGACTGACGAGACGAAA TATGTTGTACATTTTTCAGTTGGAGGTGGTGGTGAATCCTTAGTAGTTGATGCTTGGAGT CTTCGTCCATCACGTGTTTGGAAAGATGTTCAATGGATAGAGTGGTCCCGTGCAAGAGAA AGGAAATCCAAGTCTAATAAGGGCGATTCACCTCTTGAGAAACGCCAAAAGACAGACTTG CTTCAAGCAGGTGGCAATCTATCTGTTGTTGACGAAACGGGAGGATCTTCAAAGGACAAG AATACAAACAATGCAAAAAAATCGGATGAACTAAAGACATTGTCTTTGTCTCAGGGGGAA ATTGTTTTCAACATTGGGAAGAGTGTAGTTGAGAACAAATCTGATGCTCTTGCATTCAAA CGGCCTGGATTACAGAAAGAAGGATCAAAGGTTGTCTATGGTGTTCCAAAACATGGAAAG AAGAAGTTTATGGAAGTAAGCAAACATTATTACGCAGGCCAGTTTGACAAGATTTCTGAG GGTAATGCATCTAACAGATTTGTGAAACATCTGGTGACGCAATTGCCAAGGGAACGTGAA AATGATTCCAAAGTTGATCCTATTAGAGGAAGGAGAGTGGGTGAGACGAGGTCTAGATTA CCTAAACCTACGAAGTCTCAGAGCGTTCGAGCTAGCAGTGCTCCTGGAAATGATTCCTTC CCCATGCATGTTCAGAATACTTGTGTTTCTCAAAGGAGTTTTGGTTTTGCGGGAAGTTCG ACAAGCACTTCCAACAATGAAAAGTCCACTTCAGAAAAAAATAATCCTGCGCTTGGTGTG GGCTTTAGAACTGAAGTTCCTTCTGTTTCTGAACTGCAAACTGCATCTACTGTTCCTACT AATCGAGCTAAAAAGAAATACATTCCCACTGTTAGCAACATAAACAGAAGTATACTCAAT ACCTCTGAAAAGGCAAATTCTGATTCTGGTGAACCCCGAAGGACTACTTCTGATTCTACC GAACCCAGACGGTCTAACAGGCGAATTCAACCAACTTCAAGGTTGCTAGAGGGATTGCAA AGTTCCCTCATAATCTCTAAAGTTCCTGGCGAGAAGGTTCCTAGGAGCAATTACAAAAGT GCATCGTCAAGAGGGAGAGCTCAATCTCATGGTTGA

Peptide Sequence

PEP ID	Zm00001d047079_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:9:117680335:117689504:1 gene:Zm00001d047079 transcript:Zm00001d047079_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:G2484-1 protein
Sequence	MKSAPGSEETSAAGGDRSFSFEVGAPPNVAEKAHSSVWSPFHLKSTETVTENLQAGSSLK DTSDDSKKTSTIDACKEQLSERKVAESSGGSPPDNSNIGGSIKSRSSPPQQHPIPECSDL VNFPFTEAQHLQLRAQIFVYGALIQGTPPGEAYMVAAFGEPVSGGKPTWEAAWRAAFERF QYQKSLCISLETPTSSRIGSTVPEKASKGTSITSVPASKRGGKIVAPAHPAVTLHSPTSN IPFGSSTFNLQRGTHLDFSQAVSPFAYNSHMRHLSPGVAPWYTQSPGPRSAPWLISPQNL IFDSSMQPAIPTNETANGASSKNISISHTVSSGVVLPSPAPSIVSSPTAVVNDGKQKAVS SSKCGTTSQKPRKRKKASVSPEQQPVIASPQLKMDMPSFTPAIKHTAGFALSGSKLVPKT GEIASEPNYQVTGGMDSEQRIIFSEKIRCAVEQSTAQAKGASLDSMEAVKHKEGVWSNLS TISRNKLSPEVEEKLTSVAAAAEAAVSVAKAAAEAAKMASEAALQAKIMAEETLSSFTSV MSMHHEVGQSDVISSPLILSSSTPASSLKIKDKSHAPGSIISVAREAARKRVEEASAAAK RAENLDAILKAAELAAEAVFRAGTIIGMGEPLPFTLRELLEAGPNGYWKSASVRNKSGSG NDNLVTETLEVDAPANPSKSGRKRGRKPKYDQALPNSEPFSNCKELQPYGIHSGHGVVGN VPVTVPMDGTNVTSPISIVWNGIEKGSAVEVLSDKVGFGVAWFSAKVIDINENNAFVSYD NHNGTGPREEWVPLRQEGDKPPQIRLAHPATLSKFKTRKRRRETAGSCLWVIGDHVDAWV NNCCWREGVISQNYETDETKYVVHFSVGGGGESLVVDAWSLRPSRVWKDVQWIEWSRARE RKSKSNKGDSPLEKRQKTDLLQAGGNLSVVDETGGSSKDKNTNNAKKSDELKTLSLSQGE IVFNIGKSVVENKSDALAFKRPGLQKEGSKVVYGVPKHGKKKFMEVSKHYYAGQFDKISE GNASNRFVKHLVTQLPRERENDSKVDPIRGRRVGETRSRLPKPTKSQSVRASSAPGNDSF PMHVQNTCVSQRSFGFAGSSTSTSNNEKSTSEKNNPALGVGFRTEVPSVSELQTASTVPT NRAKKKYIPTVSNINRSILNTSEKANSDSGEPRRTTSDSTEPRRSNRRIQPTSRLLEGLQ SSLIISKVPGEKVPRSNYKSASSRGRAQSHG

Transcript Sequence

Transcript ID	Zm00001d047079_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:117680335:117689504:1 gene:Zm00001d047079 gene_biotype:protein_coding transcript_biotype:protein_coding description:G2484-1 protein
Sequence	CTAAAGACCGTGGGGCCTCAGCTGATGCTACTCAGAGATCAAAACAATGCTGTACCAGAA ACATGAAATCTGCTCCTGGTTCTGAGGAGACTAGTGCAGCAGGAGGTGATAGAAGCTTTT CATTTGAGGTGGGAGCTCCACCCAATGTTGCTGAGAAAGCACATAGCTCTGTTTGGAGTC CTTTTCATTTGAAGAGTACTGAGACGGTCACAGAAAATCTTCAAGCTGGAAGTTCTTTGA AGGATACTAGTGATGATAGTAAGAAAACATCTACTATAGATGCTTGTAAAGAACAACTAT CAGAAAGGAAAGTGGCTGAAAGTTCTGGGGGCAGCCCCCCAGACAACTCTAATATAGGCG GCAGCATTAAGAGCAGAAGTTCGCCACCGCAGCAGCATCCAATCCCTGAGTGTTCTGATT TAGTGAATTTTCCATTCACAGAGGCACAGCATTTGCAGCTACGCGCACAAATATTTGTTT ATGGAGCTCTTATTCAAGGAACGCCACCAGGAGAGGCTTACATGGTGGCAGCTTTTGGAG AACCTGTAAGTGGTGGCAAACCTACATGGGAGGCTGCTTGGCGAGCTGCATTTGAAAGAT TTCAGTATCAAAAATCACTTTGTATCAGTTTAGAGACCCCCACAAGTTCGCGTATAGGTA GTACTGTGCCTGAGAAAGCTAGCAAGGGTACATCAATTACATCTGTGCCAGCTAGCAAAA GAGGTGGCAAAATTGTGGCGCCAGCACATCCTGCTGTAACCCTACACTCCCCAACTTCTA ACATACCTTTTGGTAGTTCTACATTTAACCTGCAGCGAGGCACTCATCTGGATTTTAGCC AGGCAGTGTCACCATTTGCATATAATTCACACATGAGACATCTGTCTCCCGGTGTTGCCC CCTGGTATACTCAGAGCCCTGGTCCACGTTCTGCACCCTGGTTGATTTCACCACAAAACT TAATATTTGATTCATCGATGCAACCAGCTATTCCTACAAATGAAACTGCAAATGGGGCGT CATCCAAAAATATATCCATTTCACATACTGTTTCATCTGGTGTAGTTCTTCCCAGTCCAG CACCTTCTATTGTTTCTTCTCCAACAGCAGTTGTGAATGATGGAAAACAGAAGGCTGTTT CTAGCTCTAAGTGTGGCACCACATCACAAAAGCCAAGAAAAAGAAAGAAAGCTTCAGTAA GTCCAGAACAGCAACCTGTCATTGCTTCTCCTCAGCTCAAAATGGACATGCCGTCTTTTA CTCCTGCCATTAAGCACACAGCAGGATTTGCCTTATCCGGTAGCAAGCTTGTTCCTAAGA CGGGTGAGATTGCCTCTGAACCTAACTACCAGGTCACTGGTGGTATGGATAGTGAGCAAA GAATCATCTTTTCAGAAAAGATCCGTTGTGCAGTAGAACAATCAACTGCACAGGCTAAAG GTGCAAGCCTTGACTCAATGGAGGCAGTTAAGCACAAGGAAGGCGTATGGAGCAATCTAT CCACAATCTCAAGAAACAAGTTATCTCCAGAGGTCGAAGAGAAGCTTACCTCAGTTGCAG CAGCTGCTGAAGCAGCAGTTTCTGTTGCAAAGGCAGCTGCAGAAGCTGCCAAGATGGCGT CAGAGGCTGCATTGCAGGCGAAAATAATGGCAGAGGAAACTCTTAGCTCTTTTACATCTG TAATGTCCATGCATCACGAAGTTGGTCAATCTGATGTCATTAGTAGTCCACTGATCTTGT CAAGTTCAACACCAGCATCATCCCTGAAAATTAAGGACAAGAGTCATGCCCCAGGTTCCA TCATTTCTGTGGCACGGGAGGCTGCTAGAAAGAGGGTTGAAGAGGCATCTGCAGCTGCAA AACGTGCTGAAAACTTGGATGCCATATTGAAAGCTGCAGAGCTTGCCGCGGAGGCTGTGT TCAGGGCAGGAACCATTATTGGAATGGGAGAACCACTACCTTTTACCCTAAGAGAGCTTT TGGAAGCAGGGCCAAATGGCTATTGGAAGTCTGCAAGTGTAAGGAATAAATCTGGAAGTG GTAATGATAATCTAGTAACAGAAACATTGGAGGTAGATGCACCTGCTAACCCTAGCAAAT CTGGCAGAAAGCGTGGTCGGAAACCTAAATATGATCAAGCACTACCGAATTCAGAGCCAT TTTCAAACTGCAAAGAATTACAGCCATATGGAATACACTCAGGACATGGGGTTGTAGGAA ATGTTCCTGTCACTGTGCCAATGGATGGTACCAATGTTACATCACCAATAAGCATTGTCT GGAATGGCATTGAAAAGGGATCTGCAGTTGAGGTTTTATCTGACAAGGTTGGGTTTGGAG TAGCTTGGTTTTCTGCTAAGGTTATTGATATAAATGAAAATAATGCTTTTGTCAGCTATG ACAACCACAATGGAACTGGTCCTCGTGAAGAATGGGTGCCATTGAGACAAGAGGGGGATA AGCCGCCTCAGATACGTCTTGCACACCCTGCTACCCTCTCCAAATTCAAAACTAGGAAAC GGCGCAGGGAAACAGCAGGCAGTTGTTTATGGGTCATTGGAGATCATGTAGACGCATGGG TCAATAATTGCTGTTGGCGAGAGGGAGTTATTTCTCAGAATTATGAGACTGACGAGACGA AATATGTTGTACATTTTTCAGTTGGAGGTGGTGGTGAATCCTTAGTAGTTGATGCTTGGA GTCTTCGTCCATCACGTGTTTGGAAAGATGTTCAATGGATAGAGTGGTCCCGTGCAAGAG AAAGGAAATCCAAGTCTAATAAGGGCGATTCACCTCTTGAGAAACGCCAAAAGACAGACT TGCTTCAAGCAGGTGGCAATCTATCTGTTGTTGACGAAACGGGAGGATCTTCAAAGGACA AGAATACAAACAATGCAAAAAAATCGGATGAACTAAAGACATTGTCTTTGTCTCAGGGGG AAATTGTTTTCAACATTGGGAAGAGTGTAGTTGAGAACAAATCTGATGCTCTTGCATTCA AACGGCCTGGATTACAGAAAGAAGGATCAAAGGTTGTCTATGGTGTTCCAAAACATGGAA AGAAGAAGTTTATGGAAGTAAGCAAACATTATTACGCAGGCCAGTTTGACAAGATTTCTG AGGGTAATGCATCTAACAGATTTGTGAAACATCTGGTGACGCAATTGCCAAGGGAACGTG AAAATGATTCCAAAGTTGATCCTATTAGAGGAAGGAGAGTGGGTGAGACGAGGTCTAGAT TACCTAAACCTACGAAGTCTCAGAGCGTTCGAGCTAGCAGTGCTCCTGGAAATGATTCCT TCCCCATGCATGTTCAGAATACTTGTGTTTCTCAAAGGAGTTTTGGTTTTGCGGGAAGTT CGACAAGCACTTCCAACAATGAAAAGTCCACTTCAGAAAAAAATAATCCTGCGCTTGGTG TGGGCTTTAGAACTGAAGTTCCTTCTGTTTCTGAACTGCAAACTGCATCTACTGTTCCTA CTAATCGAGCTAAAAAGAAATACATTCCCACTGTTAGCAACATAAACAGAAGTATACTCA ATACCTCTGAAAAGGCAAATTCTGATTCTGGTGAACCCCGAAGGACTACTTCTGATTCTA CCGAACCCAGACGGTCTAACAGGCGAATTCAACCAACTTCAAGGTTGCTAGAGGGATTGC AAAGTTCCCTCATAATCTCTAAAGTTCCTGGCGAGAAGGTTCCTAGGAGCAATTACAAAA GTGCATCGTCAAGAGGGAGAGCTCAATCTCATGGTTGAGTGAAGGCACCACATAGCTACC TTTTGTGGGATACCTCTCGTTGTACATAGCTGCAGCCTTCTAGTACGGAAGCAGGATAGG ATTGGAGTAGGAAGTCTTCATTGGAGCACAAGGATTCGGATGTATTATAAACTAGCTTAA GTGAATTCTGTTAACCTTTTCTTTTACTTGCCTGAATCAGACTTTTCCGTGTTGTAGAAT AGTCATTAATATCGTAGAAACCTCCTTTTAG