Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d047077_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:9:117527633:117530311:1 gene:Zm00001d047077 gene_biotype:protein_coding transcript_biotype:protein_coding description:Beta-amylase 3 chloroplastic
Sequence	ATGGCTCTGACGCTGCGTTCCTCGACGTCGTTCCTGTCGCATGTGGACCCCGCCTCCAAG CTCCTCCACAAACCCACCGACGAGGCGCCGCCCTGCTGCGTCTCCGTGCCGCCTGCGCCC AGCCGCAGGCCGCGCGCGCTCCGGGCGGCCGCGGCCACGGCCACGGCGCCCTCGCCGGCG ACGCACCGCGCGCCGGCGGAGGCGGCCGAGCTGCTGCACGGAGGCGGCGCGGGCCAGCAG CACGGGCTGCCGCGCGGCGGGGTGCCGGTGTACGTGATGCTGCCGCTGGACACGGTGGGG CCAGGCGGCCAGCTGTCGCGGCAGCGCGCGGTGGCGGCTAGTCTGATGGCGCTGCGGGGC GCCGGGGTGGAGGGCGTGATGGTGGACGTGTGGTGGGGCGTGGTGGAGCGGGAGGGCCCC GGCCGCTACGACTGGGAGGCCTACGCCGAGCTCGTGCGCATGGTGGAACGCGCCGGCCTC CGGCTCCAGGCCGTCATGTCCTTCCACCAGTGCGGTGGCAACGTCGGCGACACCTGCAAC ATCCCGTTGCCGCCATGGGTGCTGGAGGAGATGAGCAGCAACCCGAACATCGTATACACG GACAGGTCCGGACGCCGGAATCCCGAGTACATCTCCCTCGGCTGCGACACACTTCCAGTG CTCAGGGGCCGGACCCCCATCCAGGTCTACACCGACTACATGCGCAGCTTCCGCCAGAGG TTCCGCGACTACCTCGGCAATGTCATCGCGGAGATCCAAGTGGGTATGGGTCCTTGTGGA GAGCTGAGGTATCCTTCGTACCCTGAGGCCAACGGAACATGGCGTTTCCCGGGCATCGGG GAGTTCCAGTGCTATGACAAGTACATGCGGGCATCGCTGGAAGCCGCGGCGGTGGCGTCG GGCCACGAGGAGTGGGGGAGGGGCGGACCGCACGACGCCGGCGAGTACAAGCAGATGCCC GACGACACGGGCTTCTTCCGGCGCGAGGGCACGTGGAGCACCGAGTATGGGCATTTCTTC CTGGAGTGGTACTCGGGCATGCTCCTGGAGCACGGTGACCGCGTCATGGACGCGGCCGAG GCCGTGTTCGGCGGCACGGGCGCAACGCTCTCCGCCAAGGTCGCCGGCATCCACTGGCAC TACCGGACCCGGTCCCACGCGGCGGAGCTCACGGCCGGGTACTACAACACGCGGGGCCGC GACGGGTACGCGCCGATCGCGCGCATGCTGGCCAAGCGCGGCGCTGTGCTCAACTTCACG TGCATGGAGATGAAGGACGAGCAGCAGCCGCAGCACGCCAGCTGCTCCCCCGAGCTGCTG GTGCAGCAGGTCAAGGCTGCGACCAGCGCCGCCGGCGTGCAGCTCGCCGGCGAGAACGCG CTGGAGCGGTACGACGATGCGGCGTTCTCGCAGGTGGTGTCGACGGCGCGCGGCGCAGGC CTGGCCGCGTTCACGTATCTGCGCATGAACAAGACGCTCTTCGACGGCGACAACTGGGGG CGGTTCGTGTCCTTCGTCAGGGCTATGGCCGACGGTGGCGCGAGGCCAGCGCTGCCGCGG TGTGACACGGGGCACTCGGACCTGTACGTCGGGTTTGTCGACGCCGCCAAGGAGAGGAAG GCGGCGGAGGCCAAGGGCGCCGCCACCACCGCAGCATTGTAG

Peptide Sequence

PEP ID	Zm00001d047077_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:9:117527633:117530311:1 gene:Zm00001d047077 transcript:Zm00001d047077_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Beta-amylase 3 chloroplastic
Sequence	MALTLRSSTSFLSHVDPASKLLHKPTDEAPPCCVSVPPAPSRRPRALRAAAATATAPSPA THRAPAEAAELLHGGGAGQQHGLPRGGVPVYVMLPLDTVGPGGQLSRQRAVAASLMALRG AGVEGVMVDVWWGVVEREGPGRYDWEAYAELVRMVERAGLRLQAVMSFHQCGGNVGDTCN IPLPPWVLEEMSSNPNIVYTDRSGRRNPEYISLGCDTLPVLRGRTPIQVYTDYMRSFRQR FRDYLGNVIAEIQVGMGPCGELRYPSYPEANGTWRFPGIGEFQCYDKYMRASLEAAAVAS GHEEWGRGGPHDAGEYKQMPDDTGFFRREGTWSTEYGHFFLEWYSGMLLEHGDRVMDAAE AVFGGTGATLSAKVAGIHWHYRTRSHAAELTAGYYNTRGRDGYAPIARMLAKRGAVLNFT CMEMKDEQQPQHASCSPELLVQQVKAATSAAGVQLAGENALERYDDAAFSQVVSTARGAG LAAFTYLRMNKTLFDGDNWGRFVSFVRAMADGGARPALPRCDTGHSDLYVGFVDAAKERK AAEAKGAATTAAL

Transcript Sequence

Transcript ID	Zm00001d047077_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:117527633:117530311:1 gene:Zm00001d047077 gene_biotype:protein_coding transcript_biotype:protein_coding description:Beta-amylase 3 chloroplastic
Sequence	ATGGCTCTGACGCTGCGTTCCTCGACGTCGTTCCTGTCGCATGTGGACCCCGCCTCCAAG CTCCTCCACAAACCCACCGACGAGGCGCCGCCCTGCTGCGTCTCCGTGCCGCCTGCGCCC AGCCGCAGGCCGCGCGCGCTCCGGGCGGCCGCGGCCACGGCCACGGCGCCCTCGCCGGCG ACGCACCGCGCGCCGGCGGAGGCGGCCGAGCTGCTGCACGGAGGCGGCGCGGGCCAGCAG CACGGGCTGCCGCGCGGCGGGGTGCCGGTGTACGTGATGCTGCCGCTGGACACGGTGGGG CCAGGCGGCCAGCTGTCGCGGCAGCGCGCGGTGGCGGCTAGTCTGATGGCGCTGCGGGGC GCCGGGGTGGAGGGCGTGATGGTGGACGTGTGGTGGGGCGTGGTGGAGCGGGAGGGCCCC GGCCGCTACGACTGGGAGGCCTACGCCGAGCTCGTGCGCATGGTGGAACGCGCCGGCCTC CGGCTCCAGGCCGTCATGTCCTTCCACCAGTGCGGTGGCAACGTCGGCGACACCTGCAAC ATCCCGTTGCCGCCATGGGTGCTGGAGGAGATGAGCAGCAACCCGAACATCGTATACACG GACAGGTCCGGACGCCGGAATCCCGAGTACATCTCCCTCGGCTGCGACACACTTCCAGTG CTCAGGGGCCGGACCCCCATCCAGGTCTACACCGACTACATGCGCAGCTTCCGCCAGAGG TTCCGCGACTACCTCGGCAATGTCATCGCGGAGATCCAAGTGGGTATGGGTCCTTGTGGA GAGCTGAGGTATCCTTCGTACCCTGAGGCCAACGGAACATGGCGTTTCCCGGGCATCGGG GAGTTCCAGTGCTATGACAAGTACATGCGGGCATCGCTGGAAGCCGCGGCGGTGGCGTCG GGCCACGAGGAGTGGGGGAGGGGCGGACCGCACGACGCCGGCGAGTACAAGCAGATGCCC GACGACACGGGCTTCTTCCGGCGCGAGGGCACGTGGAGCACCGAGTATGGGCATTTCTTC CTGGAGTGGTACTCGGGCATGCTCCTGGAGCACGGTGACCGCGTCATGGACGCGGCCGAG GCCGTGTTCGGCGGCACGGGCGCAACGCTCTCCGCCAAGGTCGCCGGCATCCACTGGCAC TACCGGACCCGGTCCCACGCGGCGGAGCTCACGGCCGGGTACTACAACACGCGGGGCCGC GACGGGTACGCGCCGATCGCGCGCATGCTGGCCAAGCGCGGCGCTGTGCTCAACTTCACG TGCATGGAGATGAAGGACGAGCAGCAGCCGCAGCACGCCAGCTGCTCCCCCGAGCTGCTG GTGCAGCAGGTCAAGGCTGCGACCAGCGCCGCCGGCGTGCAGCTCGCCGGCGAGAACGCG CTGGAGCGGTACGACGATGCGGCGTTCTCGCAGGTGGTGTCGACGGCGCGCGGCGCAGGC CTGGCCGCGTTCACGTATCTGCGCATGAACAAGACGCTCTTCGACGGCGACAACTGGGGG CGGTTCGTGTCCTTCGTCAGGGCTATGGCCGACGGTGGCGCGAGGCCAGCGCTGCCGCGG TGTGACACGGGGCACTCGGACCTGTACGTCGGGTTTGTCGACGCCGCCAAGGAGAGGAAG GCGGCGGAGGCCAAGGGCGCCGCCACCACCGCAGCATTGTAGGTGGTCATCGGTAGATGC CCATGCATGTGCTTGCATAATGCATACAGACACATGCGCCGAGCTGTTGTATAACGTACA CAGGAGAACTGTATAAATTCAGGGCCTTCAGGTTGCAAAGTTTTATAGGCTGTAATCGAG CAGGTAGATAAGGAGGCAGGCATGTCAGAACTTAGGCTATCTTCAGTTTATTTGTTCCAT TTCAAACTGTATTATAAG