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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d047069_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:9:117204892:117206444:1 gene:Zm00001d047069 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative RING zinc finger domain superfamily protein

Sequence

ATGGCGGTGCAGGCGCATTATCACCACCACCACCACCACCACCACCGCGAGTCCCCTTTC
CTCGTCAGCGGCGGCGCGCCGGAGGGCAGCCGGTTGGCGGCGGCGATGGAGCTGCATCAG
GCGCAGAAGGAGGCTACTACGGCGCAGCAGCACGCTCCGCCCGACTTCTCGCATGGAGGT
TGCGGCGGCGGGAAGAAGCGGCAGCGCGAGGCGGACCCCGTGTCCCGGCAGCTCTTGTCG
TTGCAGCAGCAGCAACCACAGGCGCAGGGGCCCAAGTTCATCAACCTGGCGCAACTGCAC
AAGCGGCCGGCGACGGGCCTCCGGCTCGACTTGGACGAGGGCTCGGAGCACGTGCCGTGC
ACGTCCTCGGCCTCGGCGTCGTGTCTCCTCCTCTCCGAAGAGCTCGCCGCGCAGCGCGAC
CAGCACAAGGACGAGATGGAACGGCTGATCCAGGAGCACGCGGAGAGGCTCCGGCGCGCG
CTGGCCGACACCCGGCGGCGGCACTACCGTTCGCTCGTCGGCGCGGCCGAGGCGGCTGCT
GCTCGGCGGATAAGGGAGAAGGAGTCGGAGGCCTGGGAGGCCGCGCGGCGCCGCGCCGAC
CTGGAGGATCGGGTCGCGCGGCTGAGGGCGGAGGCGGCGGCGTGGCAGGCAAAGGAGCTC
GCGGACCAGTCCACGGCCGCGGCGCTCCACGCGCAGCTGCAGCAGGCGAGGGGCAAGGCC
ACCGACGCCGAGGAAGGGGGCAACGCGGCGGACGACGCCGGGTCGTGCTTCGTCGACCCG
GACAGGGTGGTGGAGATCGCCCCGCCGCCGGCCAGGCCGTGCCGGGCGTGCAGGCGGCGG
TCGGCCTCCGTCGTGCTGCTCCCTTGCCGCCACCTCTGCGTCTGCGCCGAGTGCGAGCCC
GCCGTCCCCGCCGCCCCCTTTGCCGCCGCAGCTGTCGCCGCTGCCTGCCCCGTGTGCCGT
GGCGCGGTCACCGGCACGGTGCAAGTGTTCGTCTCGTAG

Peptide Sequence

PEP ID

Zm00001d047069_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:9:117204892:117206444:1 gene:Zm00001d047069 transcript:Zm00001d047069_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative RING zinc finger domain superfamily protein

Sequence

MAVQAHYHHHHHHHHRESPFLVSGGAPEGSRLAAAMELHQAQKEATTAQQHAPPDFSHGG
CGGGKKRQREADPVSRQLLSLQQQQPQAQGPKFINLAQLHKRPATGLRLDLDEGSEHVPC
TSSASASCLLLSEELAAQRDQHKDEMERLIQEHAERLRRALADTRRRHYRSLVGAAEAAA
ARRIREKESEAWEAARRRADLEDRVARLRAEAAAWQAKELADQSTAAALHAQLQQARGKA
TDAEEGGNAADDAGSCFVDPDRVVEIAPPPARPCRACRRRSASVVLLPCRHLCVCAECEP
AVPAAPFAAAAVAAACPVCRGAVTGTVQVFVS

Transcript Sequence

Transcript ID

Zm00001d047069_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:117204892:117206444:1 gene:Zm00001d047069 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative RING zinc finger domain superfamily protein

Sequence

GTTCGCGTTGCCCGCGACTCTCTCCGTCCTCCTACTCTCACACGCTTGGCGCGCGCGTGC
TTCCACACGTCCGTCGCCTCGCCTGGCTGATTGGTTTGGGACCTGGCTCCAGCAATGGCG
GTGCAGGCGCATTATCACCACCACCACCACCACCACCACCGCGAGTCCCCTTTCCTCGTC
AGCGGCGGCGCGCCGGAGGGCAGCCGGTTGGCGGCGGCGATGGAGCTGCATCAGGCGCAG
AAGGAGGCTACTACGGCGCAGCAGCACGCTCCGCCCGACTTCTCGCATGGAGGTTGCGGC
GGCGGGAAGAAGCGGCAGCGCGAGGCGGACCCCGTGTCCCGGCAGCTCTTGTCGTTGCAG
CAGCAGCAACCACAGGCGCAGGGGCCCAAGTTCATCAACCTGGCGCAACTGCACAAGCGG
CCGGCGACGGGCCTCCGGCTCGACTTGGACGAGGGCTCGGAGCACGTGCCGTGCACGTCC
TCGGCCTCGGCGTCGTGTCTCCTCCTCTCCGAAGAGCTCGCCGCGCAGCGCGACCAGCAC
AAGGACGAGATGGAACGGCTGATCCAGGAGCACGCGGAGAGGCTCCGGCGCGCGCTGGCC
GACACCCGGCGGCGGCACTACCGTTCGCTCGTCGGCGCGGCCGAGGCGGCTGCTGCTCGG
CGGATAAGGGAGAAGGAGTCGGAGGCCTGGGAGGCCGCGCGGCGCCGCGCCGACCTGGAG
GATCGGGTCGCGCGGCTGAGGGCGGAGGCGGCGGCGTGGCAGGCAAAGGAGCTCGCGGAC
CAGTCCACGGCCGCGGCGCTCCACGCGCAGCTGCAGCAGGCGAGGGGCAAGGCCACCGAC
GCCGAGGAAGGGGGCAACGCGGCGGACGACGCCGGGTCGTGCTTCGTCGACCCGGACAGG
GTGGTGGAGATCGCCCCGCCGCCGGCCAGGCCGTGCCGGGCGTGCAGGCGGCGGTCGGCC
TCCGTCGTGCTGCTCCCTTGCCGCCACCTCTGCGTCTGCGCCGAGTGCGAGCCCGCCGTC
CCCGCCGCCCCCTTTGCCGCCGCAGCTGTCGCCGCTGCCTGCCCCGTGTGCCGTGGCGCG
GTCACCGGCACGGTGCAAGTGTTCGTCTCGTAGCGGGAGGGAAAGGTTAAAAAAAATGGT
GCTCCTGCCAAAAGGAATGGCAGGTGAAAATGGGGAATGAACGATGGCAAATTGTGTAGT
GGAGTGGAGCGCATTACTTTTTA