Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d047059_T012
CDS Infomation

cds chromosome:B73_RefGen_v4:9:116854218:116856596:-1 gene:Zm00001d047059 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tobamovirus multiplication protein 2A
Sequence

ATGGTTGGTTACGGGATCTACCTGCTCGTCGAGTGGATGAAGATATCCGAGGACGGCATC
GGCGGGGCTTCGACGGCGGAGGTGCTCGTCTCTGGCCGGCCGTTGTTGGGGGCTGTCATT
CTCGGTGACAGCTTCCTCGACAATCTACCCAAAGCATGGTTTATTTATTTGTTTATTTGT
GTTGGCACCATCGTCATCTTGGTGTCTCTGTTTGGCTGCATTGGAGCAGGGACAAGAAAC
ACCTGCTGTTTGTGTTTCTATGCTTTCTTGGTCATATTGTTGATCCTTGCTGAAGCTGCA
GCTGCTGCATTCATTTTCTTTGACCATGGCTGGAAAGATGTAATTCCAGTGGACAAAACA
CATAACTTTGATGTTATGTATGACTTTCTGAAGGAAAACTGGGAGATTGCAAGATGGGTC
GCTCTGGGCGTTGTTGTTTTTGAGGCAGTGCTCTTGCTGTTAGCTCTGGCTGTCAGGGCA
ATGAACAAACCTGCTGAGTATGACAGTGATGACGAAATTATAGCAATTGGCCGAAGCCCT
ACCATCCGGCAGCCACTGATCCATACCCAAAATGTTCCTGCCACTGGTGTTCCTGTCCCA
ACACTTGATCAACGTGCAAGTAGAAATGATGCCTGGAGCCAAAGGATGCGAGAGAAGTAT
GGTCTGGACACGAGCCAGTTCACATACAACCCTTCAGACCCAAGCAGGTACCAGCAAAAT
GGCACGCCACGGGCTGAAGAAAGGAGTCGATGCACTATAATGTGA

Peptide Sequence

PEP ID

Zm00001d047059_P012
PEP Infomation

pep chromosome:B73_RefGen_v4:9:116854218:116856596:-1 gene:Zm00001d047059 transcript:Zm00001d047059_T012 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tobamovirus multiplication protein 2A
Sequence

MVGYGIYLLVEWMKISEDGIGGASTAEVLVSGRPLLGAVILGDSFLDNLPKAWFIYLFIC
VGTIVILVSLFGCIGAGTRNTCCLCFYAFLVILLILAEAAAAAFIFFDHGWKDVIPVDKT
HNFDVMYDFLKENWEIARWVALGVVVFEAVLLLLALAVRAMNKPAEYDSDDEIIAIGRSP
TIRQPLIHTQNVPATGVPVPTLDQRASRNDAWSQRMREKYGLDTSQFTYNPSDPSRYQQN
GTPRAEERSRCTIM

Transcript Sequence

Transcript ID

Zm00001d047059_T012
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:116854218:116856596:-1 gene:Zm00001d047059 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tobamovirus multiplication protein 2A
Sequence

GGGCTTCTTCGAGTGCCTGCTCAGGCTGCTCAACTTCATCCTCACCGTCGCCGGCCTCGC
TATGGTTGGTTACGGGATCTACCTGCTCGTCGAGTGGATGAAGATATCCGAGGACGGCAT
CGGCGGGGCTTCGACGGCGGAGGTGCTCGTCTCTGGCCGGCCGTTGTTGGGGGCTGTCAT
TCTCGGTGACAGCTTCCTCGACAATCTACCCAAAGCATGGTTTATTTATTTGTTTATTTG
TGTTGGCACCATCGTCATCTTGGTGTCTCTGTTTGGCTGCATTGGAGCAGGGACAAGAAA
CACCTGCTGTTTGTGTTTCTATGCTTTCTTGGTCATATTGTTGATCCTTGCTGAAGCTGC
AGCTGCTGCATTCATTTTCTTTGACCATGGCTGGAAAGATGTAATTCCAGTGGACAAAAC
ACATAACTTTGATGTTATGTATGACTTTCTGAAGGAAAACTGGGAGATTGCAAGATGGGT
CGCTCTGGGCGTTGTTGTTTTTGAGGCAGTGCTCTTGCTGTTAGCTCTGGCTGTCAGGGC
AATGAACAAACCTGCTGAGTATGACAGTGATGACGAAATTATAGCAATTGGCCGAAGCCC
TACCATCCGGCAGCCACTGATCCATACCCAAAATGTTCCTGCCACTGGTGTTCCTGTCCC
AACACTTGATCAACGTGCAAGTAGAAATGATGCCTGGAGCCAAAGGATGCGAGAGAAGTA
TGGTCTGGACACGAGCCAGTTCACATACAACCCTTCAGACCCAAGCAGGTACCAGCAAAA
TGGCACGCCACGGGCTGAAGAAAGGAGTCGATGCACTATAATGTGAAGAATTCTTCATGA
GGTCCTACGAGATAATAGACTTTCTTGAAGGGGCTACTGTAGTTTGGTGTTACCAGTGTT
GTTCAGACTTTACACAGCGGTGTGTGGAATAGAAGAATCCCGACCATATTTTTTGTCACG
CTCGATATGACTTCTCAGCAAATGCTCTATGCACCTAATT