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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d047048_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:9:116616211:116616862:-1 gene:Zm00001d047048 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative transcription elongation factor SPT5 homolog 1
Sequence

ATGAATGGCGACATGGCTAGCTTGTCCACTCTGCTTGCAAACAGGAAAAAAGGACACTTT
ATGAAGGGTGATGCCGTCATTGTTATTAAAGGCGATTTGAAAAATCTAGAGGGTTGGGTT
GAGAAAGTAGAGGATGAAACCGTTCACATCAGGCCAAAAATATCTGATCTCCCGAAAACA
TTAGCCTTCAATGAAAAGGAGCTTTGCAAATATTTCAAGCCTGGTGACCATGTCAAGGTG
ATCTTAGGAGTTCAAGAAGGCGCTACTGGCATGGTTGTTAAAGTGGAAGGGCATGTCTTG
ATCATTTTGTCTGACACAACTAAAGAACATATCCGTGTGTTTGTTGATCATGTCGTTGAA
AGCTCTGAAATTACCACAGGAATCACCAGAATAGGTGATTATGAACTGCATGATCTTGTC
CTACTCTGTTCTAAAATGTAG

Peptide Sequence

PEP ID

Zm00001d047048_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:9:116616211:116616862:-1 gene:Zm00001d047048 transcript:Zm00001d047048_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative transcription elongation factor SPT5 homolog 1
Sequence

MNGDMASLSTLLANRKKGHFMKGDAVIVIKGDLKNLEGWVEKVEDETVHIRPKISDLPKT
LAFNEKELCKYFKPGDHVKVILGVQEGATGMVVKVEGHVLIILSDTTKEHIRVFVDHVVE
SSEITTGITRIGDYELHDLVLLCSKM

Transcript Sequence

Transcript ID

Zm00001d047048_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:116616211:116616862:-1 gene:Zm00001d047048 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative transcription elongation factor SPT5 homolog 1
Sequence

ATGAATGGCGACATGGCTAGCTTGTCCACTCTGCTTGCAAACAGGAAAAAAGGACACTTT
ATGAAGGGTGATGCCGTCATTGTTATTAAAGGCGATTTGAAAAATCTAGAGGGTTGGGTT
GAGAAAGTAGAGGATGAAACCGTTCACATCAGGCCAAAAATATCTGATCTCCCGAAAACA
TTAGCCTTCAATGAAAAGGAGCTTTGCAAATATTTCAAGCCTGGTGACCATGTCAAGGTG
ATCTTAGGAGTTCAAGAAGGCGCTACTGGCATGGTTGTTAAAGTGGAAGGGCATGTCTTG
ATCATTTTGTCTGACACAACTAAAGAACATATCCGTGTGTTTGTTGATCATGTCGTTGAA
AGCTCTGAAATTACCACAGGAATCACCAGAATAGGTGATTATGAACTGCATGATCTTGTC
CTACTCTGTTCTAAAATGTAGTAGCTGTTGTTAGATGAGCTATGCAAGATG