Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d047044_T016
CDS Infomation	cds chromosome:B73_RefGen_v4:9:116549237:116554018:1 gene:Zm00001d047044 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING/FYVE/PHD zinc finger superfamily protein
Sequence	ATGCGAGTGAAGTTGGAAAAAGTTCCAGTTGGTGAATGGTTTTGTGAAGAATGCCAGCTT AAGGAAGATCAGAACAATACAAGTAACTATGGTATCTCGGTGGTTAATGTGACAGAAGGA AAGAACCAAAGGACAGAAAGTCGAAGCAAGCCTAAGACATTGCAAATTGTTGTGCCTGAT TTTGATGCTCTGGAAGTCACACACAGCGCATTGACAGCTGATCGGTGTGATGGTAACAGT AAAAGGTTGCATTTAGCTTCGACTGATACACAAACACGGCAACTAAAGGATACCACCCCA GCTGCTCAAAGGTTGGATGTGAAGAACAAAAAATCATTAAGTGTTACAAACCGTAACAAA CTGCAAGTTCTTACATCTGATTTAGACACACGACCACACAATTATGGAACATCAACATCT GGAGTCTATACCAATAAAAGTCAAAGTTCAGAATTTTTGTTAAACCACAAAAAGCTGCGA GTTTCTACTGACATGCAGTCGCCACTCTCAAGCGAAGGCCTACGGAGTCCACCAATATCA TGCAAGAGACATGCAGAGAGTATGTCGTCCCCTAAGCCTAGGATCGTCAAGGCGGGTACC CTTGGAAAACAAGATGTCATCTCTCGTGCGAACTCATTTAAGAAATCTAACAAGGGAGGT TTAAGTTCAGTTGATAATATTCCAGTGAGAACTACCCAGGCTGTCAAAAGTTCTGACTCT CAGACATTGTCACGGTCATATTCCTTGGGGAACATGGTGAATGCTAAAGCTCCAGTTCCT TCACCAAGAGGCTTTTTATCCAAGCAGCTATCCTTCAACAGCACCAACAACGGACCAAAG GTCAAACAGTTGGCTGATGGGGTGTCTAGCAAGTTAAGACCTGCAGAACATTCCCCAAGA GATCCTAGAGATAAGAAATCCATCAAAAAGATTGTACAATCAGGATCCTTCAAACACGAG GGTTCAGATTCCATAGTTGCTGGATCATCAAAAAAAAAGCAAACATTTCATTTGTCTCAA GATGAAAAACCAGGAGTACTGAAGGTAATAAAGGAAAATAATTTAACAGAAAGAAGGGCT TCATTTAGCTTGAAAAAACGAAACATTCCTTCATCTCCAAGGCCTGACAGCTGTATGAAG TCAGGGGAAAGAAAAAATGATCAGGATATTTCAAGGTCTGGAACAAGCATACTTAAAAGT AGCAAAAAACCTGGATATGCTGAAAAGAAGCAGAACAATGATTTGTCCAGAAGTGATAAT GGCAAGGAAGATGTTACCGTGCATCCAAAAACAATGGAAGTTTCTGGTAAAGATGCTTAC GTAGTGAAGACATCTGATCCACCAGTTCAACCCCAATGTGCCAAAAAGGATAGACCAAAT GATGTTGAGGATGACGATTTACTCATTTCAGTGAATAATGTTAACATAGCGCCAAATGAG CATGCCGAGGTGGTTCCCACAACATTTGCTGCCATGACTTATGAATCAGATTTGCAAGAT GTTCCAAGAGAAAGCACCTCTGATGATTCAGCTCCAAAAGTGGTATGTTGCCAACAAAAG CTTTTGGAAAACACAGGAGATGATTCTGGTAAAATCGTAGAGGTGGTTCAAGATTCAGGA GATATATTGTCTGTGACTCCACATGGTCTTCAGATGGCACACAATCTATACCCCCCTGAC AATAAATTGCATAAACCAGATTTGAAGAAGGAAGCTTTTGCTGATCAATCTTCCGCTCTT GGGAATTGTTTAAAAGATTTTGTTATTCCAGAGCAGTCTTACATCTGGCAGGGTGGGTTT GAGGTTTCAGGACATGGAAACTCCCCTGAAATGTTCGATGGGTTTCAAGCTTACTTGTCT ACTTGCGCCTCATCCAAAGTACGTGAAGTAGGTGAACAATTACCTGACAAAATTCAGCTA GCAGAAGTCCCACGGCATTCCTCATGGCCACTGCAATTTAATGAAGTAAATCCAACTGAA GATAATATTGCTCTTTTTTTCTTTGCTAAAGATGTTGAAAGTTATGAAAGGGCATATGGA AAACTCTTGGATAACATGCTTCTTGGTGATTTGTCTCTTAAAGCAAATATTGGTGGCACT GAACTTCTCATTTTCCCATCCGATAAATTGCCAGAGAGGATTCAACGTTGGAATGGTTTA CCTTTCTTTTGGGGCATTTTTTATGCCCGGAAAGCAAGTAGTCCACTAGAGCTTCCTACA AATAATTGTCCATTAGAACAAATCAATGAACCTGTTATCCAGCATGATATTGGTTCGCCT AAGGCACATCAGCCTTTGGGTATAGATTTGAATGAGTGCCCTAATGATTATATATCTGAT CTGTCTCTTTCACTTGGATCAGAGAGTGAGAAGTCTGGTGCATCTTTAGATCGTAATATT GTATTAGAGTCCAAACGTGAGGATAGAAGTCTGAATGCAAGTGAAATACATCATGAAGAA ACTGCAGGCACAAGACAAATTATACCGGGGCATCCTTCTGTTGCTTCCTGTGGAACTAAT CTTCCCACAATCTCAACAGGAGGTCATGACATGATTCAGGATTATCTGGCTGCTGCTAAA GGTAGCACAGGAACACCAGGTGGAAACAAAATGGAGAAAACAGATCAGAATGAAACTCTG TTCCGTTTTTCGCAGCAACTAGGTGCAACTAGATCAATCTCACATGAGATAGAACTTAAT AAACATGGTCTTTTGCCCTCGCACTGTCATTTGAGTGGATCAAAGATATGTGATGATCAA ACCAAATCAACTCCAAATTCAGATATGGGTCCTTTGGATTTTGACATCACCAACAAAAGG CAGAAGACTTATGGGAAACACTCTTGCATTTTTGGAGATGCAATGACACCTATGAAATGC TTGTCCAAGATACATCCCTTACCGGCTGGACAGGATAATCCATGCGATGTTTTACAGCAT TGTCATCGGGGCCCTTCAGATCCTGCCTCTCTTAAAAAACCTTTACCTGATCATTTCATC CACGTTCTTTCATCTGACGACGAAGATTCCCCAGAACCTAGTACTAGCTTAAATAAGGCA TCATCGAAGGCAGATGAGGGCTCCTCCATTTTATGCTCACTTTCCCTATCCATGGTGGCA ACGAAGCGTAATCTTTCTGGTTCAGATATTGTAGATGATGAACCACTGTCTCTCTCTCTT GGGCTCCCTAGTGTTGTCGGTGGGAGAGCAGATCAGGAGATGAAGCAATTCCTGCCGGAG AAGCCAGGCATAAACACTTAA

Peptide Sequence

PEP ID	Zm00001d047044_P016
PEP Infomation	pep chromosome:B73_RefGen_v4:9:116549237:116554018:1 gene:Zm00001d047044 transcript:Zm00001d047044_T016 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING/FYVE/PHD zinc finger superfamily protein
Sequence	MRVKLEKVPVGEWFCEECQLKEDQNNTSNYGISVVNVTEGKNQRTESRSKPKTLQIVVPD FDALEVTHSALTADRCDGNSKRLHLASTDTQTRQLKDTTPAAQRLDVKNKKSLSVTNRNK LQVLTSDLDTRPHNYGTSTSGVYTNKSQSSEFLLNHKKLRVSTDMQSPLSSEGLRSPPIS CKRHAESMSSPKPRIVKAGTLGKQDVISRANSFKKSNKGGLSSVDNIPVRTTQAVKSSDS QTLSRSYSLGNMVNAKAPVPSPRGFLSKQLSFNSTNNGPKVKQLADGVSSKLRPAEHSPR DPRDKKSIKKIVQSGSFKHEGSDSIVAGSSKKKQTFHLSQDEKPGVLKVIKENNLTERRA SFSLKKRNIPSSPRPDSCMKSGERKNDQDISRSGTSILKSSKKPGYAEKKQNNDLSRSDN GKEDVTVHPKTMEVSGKDAYVVKTSDPPVQPQCAKKDRPNDVEDDDLLISVNNVNIAPNE HAEVVPTTFAAMTYESDLQDVPRESTSDDSAPKVVCCQQKLLENTGDDSGKIVEVVQDSG DILSVTPHGLQMAHNLYPPDNKLHKPDLKKEAFADQSSALGNCLKDFVIPEQSYIWQGGF EVSGHGNSPEMFDGFQAYLSTCASSKVREVGEQLPDKIQLAEVPRHSSWPLQFNEVNPTE DNIALFFFAKDVESYERAYGKLLDNMLLGDLSLKANIGGTELLIFPSDKLPERIQRWNGL PFFWGIFYARKASSPLELPTNNCPLEQINEPVIQHDIGSPKAHQPLGIDLNECPNDYISD LSLSLGSESEKSGASLDRNIVLESKREDRSLNASEIHHEETAGTRQIIPGHPSVASCGTN LPTISTGGHDMIQDYLAAAKGSTGTPGGNKMEKTDQNETLFRFSQQLGATRSISHEIELN KHGLLPSHCHLSGSKICDDQTKSTPNSDMGPLDFDITNKRQKTYGKHSCIFGDAMTPMKC LSKIHPLPAGQDNPCDVLQHCHRGPSDPASLKKPLPDHFIHVLSSDDEDSPEPSTSLNKA SSKADEGSSILCSLSLSMVATKRNLSGSDIVDDEPLSLSLGLPSVVGGRADQEMKQFLPE KPGINT

Transcript Sequence

Transcript ID	Zm00001d047044_T016
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:116549237:116554018:1 gene:Zm00001d047044 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING/FYVE/PHD zinc finger superfamily protein
Sequence	GCACCAGATGCCTTGAGGGAGCAGAGCATATGTAAGTTACATTCTGTGATAGTTTTGTTT CTAGCATTTGTCGGAAGTTGGAACTTTCATAGGTTCTGTCCAGTATTTTGTTCGACTAAG AAGTCATTAATTTAGCAGTGGAAGTCATATTGATTATACTTACCGGCAAATTTTATAGTT CATACATTCTTTGATCCCAAATGAGTCAAGCTAGGTTTCTCCCAAGTGCACCAAATATAA GTTCATGATAACTCCAACGCACATTTTTGCCTCATTCTTCCATGTCTACTACTAAAATGT ACACTAATCAATGCAATACACTTCTCACTCAATTCTAGCAATGATTAATGGATAATATCT TCATTGCACCCCTCACCTTAATATCTGTGCCCAAGTCCAATACTCGAAATGGGCTTCTAT TTGGGATCGGGGGAGTACAGACAAGGCACTTTAATTTAATTTGGACTTTTAGCTACACTA ATAATCTGCTCAGGTAGTAACCTACCATTGTGGCAAACCATTAACTCTTGTACAGAAGTT AATTTCCTTCAGCTGTGGTGTTACATAATTTTTTTAGGTCCATCAGTGTTTACTTGTCGA ATGAAACAAAAACATTGTTTGTTATTCAGATTAGTCTAGTACTTGTATCATAACTTTTAG GATCACTATTTGTAAGGTAAAATGCATACGCAACATCCATATTTCACATGGACATATTAG TGTTAACTGTTAATTTATTTTTACAAGTTACTGCATGCGAGTGAAGTTGGAAAAAGTTCC AGTTGGTGAATGGTTTTGTGAAGAATGCCAGCTTAAGGAAGATCAGAACAATACAAGTAA CTATGGTATCTCGGTGGTTAATGTGACAGAAGGAAAGAACCAAAGGACAGAAAGTCGAAG CAAGCCTAAGACATTGCAAATTGTTGTGCCTGATTTTGATGCTCTGGAAGTCACACACAG CGCATTGACAGCTGATCGGTGTGATGGTAACAGTAAAAGGTTGCATTTAGCTTCGACTGA TACACAAACACGGCAACTAAAGGATACCACCCCAGCTGCTCAAAGGTTGGATGTGAAGAA CAAAAAATCATTAAGTGTTACAAACCGTAACAAACTGCAAGTTCTTACATCTGATTTAGA CACACGACCACACAATTATGGAACATCAACATCTGGAGTCTATACCAATAAAAGTCAAAG TTCAGAATTTTTGTTAAACCACAAAAAGCTGCGAGTTTCTACTGACATGCAGTCGCCACT CTCAAGCGAAGGCCTACGGAGTCCACCAATATCATGCAAGAGACATGCAGAGAGTATGTC GTCCCCTAAGCCTAGGATCGTCAAGGCGGGTACCCTTGGAAAACAAGATGTCATCTCTCG TGCGAACTCATTTAAGAAATCTAACAAGGGAGGTTTAAGTTCAGTTGATAATATTCCAGT GAGAACTACCCAGGCTGTCAAAAGTTCTGACTCTCAGACATTGTCACGGTCATATTCCTT GGGGAACATGGTGAATGCTAAAGCTCCAGTTCCTTCACCAAGAGGCTTTTTATCCAAGCA GCTATCCTTCAACAGCACCAACAACGGACCAAAGGTCAAACAGTTGGCTGATGGGGTGTC TAGCAAGTTAAGACCTGCAGAACATTCCCCAAGAGATCCTAGAGATAAGAAATCCATCAA AAAGATTGTACAATCAGGATCCTTCAAACACGAGGGTTCAGATTCCATAGTTGCTGGATC ATCAAAAAAAAAGCAAACATTTCATTTGTCTCAAGATGAAAAACCAGGAGTACTGAAGGT AATAAAGGAAAATAATTTAACAGAAAGAAGGGCTTCATTTAGCTTGAAAAAACGAAACAT TCCTTCATCTCCAAGGCCTGACAGCTGTATGAAGTCAGGGGAAAGAAAAAATGATCAGGA TATTTCAAGGTCTGGAACAAGCATACTTAAAAGTAGCAAAAAACCTGGATATGCTGAAAA GAAGCAGAACAATGATTTGTCCAGAAGTGATAATGGCAAGGAAGATGTTACCGTGCATCC AAAAACAATGGAAGTTTCTGGTAAAGATGCTTACGTAGTGAAGACATCTGATCCACCAGT TCAACCCCAATGTGCCAAAAAGGATAGACCAAATGATGTTGAGGATGACGATTTACTCAT TTCAGTGAATAATGTTAACATAGCGCCAAATGAGCATGCCGAGGTGGTTCCCACAACATT TGCTGCCATGACTTATGAATCAGATTTGCAAGATGTTCCAAGAGAAAGCACCTCTGATGA TTCAGCTCCAAAAGTGGTATGTTGCCAACAAAAGCTTTTGGAAAACACAGGAGATGATTC TGGTAAAATCGTAGAGGTGGTTCAAGATTCAGGAGATATATTGTCTGTGACTCCACATGG TCTTCAGATGGCACACAATCTATACCCCCCTGACAATAAATTGCATAAACCAGATTTGAA GAAGGAAGCTTTTGCTGATCAATCTTCCGCTCTTGGGAATTGTTTAAAAGATTTTGTTAT TCCAGAGCAGTCTTACATCTGGCAGGGTGGGTTTGAGGTTTCAGGACATGGAAACTCCCC TGAAATGTTCGATGGGTTTCAAGCTTACTTGTCTACTTGCGCCTCATCCAAAGTACGTGA AGTAGGTGAACAATTACCTGACAAAATTCAGCTAGCAGAAGTCCCACGGCATTCCTCATG GCCACTGCAATTTAATGAAGTAAATCCAACTGAAGATAATATTGCTCTTTTTTTCTTTGC TAAAGATGTTGAAAGTTATGAAAGGGCATATGGAAAACTCTTGGATAACATGCTTCTTGG TGATTTGTCTCTTAAAGCAAATATTGGTGGCACTGAACTTCTCATTTTCCCATCCGATAA ATTGCCAGAGAGGATTCAACGTTGGAATGGTTTACCTTTCTTTTGGGGCATTTTTTATGC CCGGAAAGCAAGTAGTCCACTAGAGCTTCCTACAAATAATTGTCCATTAGAACAAATCAA TGAACCTGTTATCCAGCATGATATTGGTTCGCCTAAGGCACATCAGCCTTTGGGTATAGA TTTGAATGAGTGCCCTAATGATTATATATCTGATCTGTCTCTTTCACTTGGATCAGAGAG TGAGAAGTCTGGTGCATCTTTAGATCGTAATATTGTATTAGAGTCCAAACGTGAGGATAG AAGTCTGAATGCAAGTGAAATACATCATGAAGAAACTGCAGGCACAAGACAAATTATACC GGGGCATCCTTCTGTTGCTTCCTGTGGAACTAATCTTCCCACAATCTCAACAGGAGGTCA TGACATGATTCAGGATTATCTGGCTGCTGCTAAAGGTAGCACAGGAACACCAGGTGGAAA CAAAATGGAGAAAACAGATCAGAATGAAACTCTGTTCCGTTTTTCGCAGCAACTAGGTGC AACTAGATCAATCTCACATGAGATAGAACTTAATAAACATGGTCTTTTGCCCTCGCACTG TCATTTGAGTGGATCAAAGATATGTGATGATCAAACCAAATCAACTCCAAATTCAGATAT GGGTCCTTTGGATTTTGACATCACCAACAAAAGGCAGAAGACTTATGGGAAACACTCTTG CATTTTTGGAGATGCAATGACACCTATGAAATGCTTGTCCAAGATACATCCCTTACCGGC TGGACAGGATAATCCATGCGATGTTTTACAGCATTGTCATCGGGGCCCTTCAGATCCTGC CTCTCTTAAAAAACCTTTACCTGATCATTTCATCCACGTTCTTTCATCTGACGACGAAGA TTCCCCAGAACCTAGTACTAGCTTAAATAAGGCATCATCGAAGGCAGATGAGGGCTCCTC CATTTTATGCTCACTTTCCCTATCCATGGTGGCAACGAAGCGTAATCTTTCTGGTTCAGA TATTGTAGATGATGAACCACTGTCTCTCTCTCTTGGGCTCCCTAGTGTTGTCGGTGGGAG AGCAGATCAGGAGATGAAGCAATTCCTGCCGGAGAAGCCAGGCATAAACACTTAATGCCC CTTTAGATTTGCGAGTGTACAGTTTTGTGCAGCTGTATGGAGTTTAGACAGGGTAGAAGT ATGGTATAGCTGTTAAATTATGAATATTTTTCATTTTTTTCTCTCTCACTGTTATATGCA TCTGCTGCCGTTGTTAGTGATAATGGTGTGATGATGTTACTATCTGCCATATCTATGAGA TATATGGTGTTAGTTTCTTGAGATATTATGGGTATGACATAAAAGGATAGATC