Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d046971_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:9:113591821:113595110:-1 gene:Zm00001d046971 gene_biotype:protein_coding transcript_biotype:protein_coding description:Filamentation temperature-sensitive H 2A isoform 1%3B Filamentation temperature-sensitive H 2A isoform 2%3B Filamentation temperature-sensitive H 2A isoform 3
Sequence	ATGGCACCACCATCCATGTGTCTTGCGGCAAAGGGGGTGCTTCCCTTCTCGGCACTTATT TCAAGTGGTGTTACACAAAGGCCAGTGTCAGTGACCGCTTCCTTGGAGCACAAAACCAGC GATGCTAGAAGGAAGTTCCTAAAACTTGCGCTTGGGAATATCGGAGTTGGACTGCCCACC TTGTTGGGTGTTAAGAAAGCTCTCGCTGATGAGCAAGGAATCTCGTCCTCGAGGATGTCT TATTCAAGGTTCCTTGAGTATCTTGACAAGGGTAGAGTGAAGAAGGTTGATTTATTTGAG AATGGGACAATTGCTATCGTGGAGGCCATTTCTCCTGAGCTTGGCAACCGCGTGCAGAGA GTCCGTGTGCAGCTTCCTGGTCTAAGCCAGGAGCTTCTTCAGAAGTTGAGGGAAAAGAAC ATCGATTTTGCTGCTCACAGCAACCAGGAGGACTCTGGTTCTCTTCTGTTCAACCTTATT GGAAATTTGGCATTCCCACTTATTCTTATCGGTGGTCTATTTTTACTGTCAAGAAGGGCA CAAGGTGGCCTTGGTGGACCCAATGGCCCTGGTTTTCCCCTTGCAATGAGAACACCTGGG TTCAGTGGAGCAGACTTGGCAAACCTTCTGAATGAAGCAGCCATTCTGGCTGGACGGCGG GGGAGGACAGCAATTTCTTCAAAAGAGATAGATGATTCTATTGACAGAATTGTGGCTGGT ATGGAAGGGACTGTGATGACAGACGGGAAGAGCAAAAGTCTTGTTGCTTACCATGAAGTC GGGCATGCAATTTGCGGAACTTTGACACCTGGCCATGATCCTGTCCAAAAGGTTACCTTA ATCCCAAGGGGTCAAGCTCGTGGTCTTACATGGTTTATCCCGATGGATGACCCAACACTC ATCTCCAGGCAGCAACTTTTTGCCAGAATTGTTGGCGGCCTTGGTGGTAGAGCTGCTGAG GAGGTGATATTTGGAGAGCCTGAGGTGACCACTGGAGCTGCTGGTGACTTGCAGCAAATT ACTGGCTTAGCCAAGCAGATGGTGGTAACGTTCGGTATGTCTGAAATTGGTCCATGGTCT CTGATGGAGGGTGGGGCACAGAGTGGGGACGTCATCATGCGAATGATGGCAAGGAACTCC ATGTCAGAGAAGCTTGCGGAGGACATTGATTCGGCAGTGAAGCAGTTGTCAGATGAGGCC TACGAGATCGCATTGAGGCACATTAGAAACAACAGGGAGGCCATCGACAAAATCGTTGAG GTGCTCATTGAGAAGGAGACACTGGCCGGAGACGAGTTCCGGGCGATTCTTTCTGAGTTT GTGGAGATCCCTGTAGAGAACCGGGTTCCCCCAGCCACACCGGCGGCCGCCCTCCCTGCC TAA

Peptide Sequence

PEP ID	Zm00001d046971_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:9:113591821:113595110:-1 gene:Zm00001d046971 transcript:Zm00001d046971_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Filamentation temperature-sensitive H 2A isoform 1%3B Filamentation temperature-sensitive H 2A isoform 2%3B Filamentation temperature-sensitive H 2A isoform 3
Sequence	MAPPSMCLAAKGVLPFSALISSGVTQRPVSVTASLEHKTSDARRKFLKLALGNIGVGLPT LLGVKKALADEQGISSSRMSYSRFLEYLDKGRVKKVDLFENGTIAIVEAISPELGNRVQR VRVQLPGLSQELLQKLREKNIDFAAHSNQEDSGSLLFNLIGNLAFPLILIGGLFLLSRRA QGGLGGPNGPGFPLAMRTPGFSGADLANLLNEAAILAGRRGRTAISSKEIDDSIDRIVAG MEGTVMTDGKSKSLVAYHEVGHAICGTLTPGHDPVQKVTLIPRGQARGLTWFIPMDDPTL ISRQQLFARIVGGLGGRAAEEVIFGEPEVTTGAAGDLQQITGLAKQMVVTFGMSEIGPWS LMEGGAQSGDVIMRMMARNSMSEKLAEDIDSAVKQLSDEAYEIALRHIRNNREAIDKIVE VLIEKETLAGDEFRAILSEFVEIPVENRVPPATPAAALPA

Transcript Sequence

Transcript ID	Zm00001d046971_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:113591821:113595110:-1 gene:Zm00001d046971 gene_biotype:protein_coding transcript_biotype:protein_coding description:Filamentation temperature-sensitive H 2A isoform 1%3B Filamentation temperature-sensitive H 2A isoform 2%3B Filamentation temperature-sensitive H 2A isoform 3
Sequence	ATGGCACCACCATCCATGTGTCTTGCGGCAAAGGGGGTGCTTCCCTTCTCGGCACTTATT TCAAGTGGTGTTACACAAAGGCCAGTGTCAGTGACCGCTTCCTTGGAGCACAAAACCAGC GATGCTAGAAGGAAGTTCCTAAAACTTGCGCTTGGGAATATCGGAGTTGGACTGCCCACC TTGTTGGGTGTTAAGAAAGCTCTCGCTGATGAGCAAGGAATCTCGTCCTCGAGGATGTCT TATTCAAGGTTCCTTGAGTATCTTGACAAGGGTAGAGTGAAGAAGGTTGATTTATTTGAG AATGGGACAATTGCTATCGTGGAGGCCATTTCTCCTGAGCTTGGCAACCGCGTGCAGAGA GTCCGTGTGCAGCTTCCTGGTCTAAGCCAGGAGCTTCTTCAGAAGTTGAGGGAAAAGAAC ATCGATTTTGCTGCTCACAGCAACCAGGAGGACTCTGGTTCTCTTCTGTTCAACCTTATT GGAAATTTGGCATTCCCACTTATTCTTATCGGTGGTCTATTTTTACTGTCAAGAAGGGCA CAAGGTGGCCTTGGTGGACCCAATGGCCCTGGTTTTCCCCTTGCAATGAGAACACCTGGG TTCAGTGGAGCAGACTTGGCAAACCTTCTGAATGAAGCAGCCATTCTGGCTGGACGGCGG GGGAGGACAGCAATTTCTTCAAAAGAGATAGATGATTCTATTGACAGAATTGTGGCTGGT ATGGAAGGGACTGTGATGACAGACGGGAAGAGCAAAAGTCTTGTTGCTTACCATGAAGTC GGGCATGCAATTTGCGGAACTTTGACACCTGGCCATGATCCTGTCCAAAAGGTTACCTTA ATCCCAAGGGGTCAAGCTCGTGGTCTTACATGGTTTATCCCGATGGATGACCCAACACTC ATCTCCAGGCAGCAACTTTTTGCCAGAATTGTTGGCGGCCTTGGTGGTAGAGCTGCTGAG GAGGTGATATTTGGAGAGCCTGAGGTGACCACTGGAGCTGCTGGTGACTTGCAGCAAATT ACTGGCTTAGCCAAGCAGATGGTGGTAACGTTCGGTATGTCTGAAATTGGTCCATGGTCT CTGATGGAGGGTGGGGCACAGAGTGGGGACGTCATCATGCGAATGATGGCAAGGAACTCC ATGTCAGAGAAGCTTGCGGAGGACATTGATTCGGCAGTGAAGCAGTTGTCAGATGAGGCC TACGAGATCGCATTGAGGCACATTAGAAACAACAGGGAGGCCATCGACAAAATCGTTGAG GTGCTCATTGAGAAGGAGACACTGGCCGGAGACGAGTTCCGGGCGATTCTTTCTGAGTTT GTGGAGATCCCTGTAGAGAACCGGGTTCCCCCAGCCACACCGGCGGCCGCCCTCCCTGCC TAAAGTCAAGTCTTGTAGGGGGTGAAATTTGTTGTTGTAAGATGTTCATATTTTGGATTC TTGGTGTACACTAATTCTACTTCACCTGCCGGGTTTTTGGTAGACGACATGTAACTTGCT CATGGTGAACTATAGTAAAATGTAATTAGCTTAAAAGGCCTGGCGCAACATTTTCGGTTT CTAGCTTCTGGCGAGTGAATTCTCTTGCTCGTAGATTAACGAGAAAATTGCACGGTTCCT ACTT