Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d046967_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:9:113422355:113423101:1 gene:Zm00001d046967 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CCAAT-HAP5-transcription factor 57 description:Nuclear transcription factor Y subunit C-2
Sequence

ATGGAACCATCCCCTCAGCCTATGGGTGTCGCTGCCGGTGGGTCACAAGTGTATCCTGCC
TCTGCCTATCCGCCTGCAGCAACAGTAGCTCCTGCTTCTGTTGTATCTGCTGGTTTACAG
TCAGGGCAGCCATTCCCAGCCAATCCTGGTCATATGAGTGCTCAGCACCAGATTGTCTAC
CAACAAGCTCAACAATTCCACCAACAGCTCCAGCAGCAACAACAACAGCAGCTTCAGCAG
TTCTGGGTTGAACGCATGACTGAAATTGAGGCGACGACTGATTTCAAGAACCACAACTTG
CCACTTGCGAGGATAAAGAAGATCATGAAGGCCGATGAAGATGTTCGCATGATCTCAGCT
GAAGCTCCTGTAGTCTTTGCAAAAGCTTGTGAGATATTCATACTGGAGCTGACACTTAGG
TCGTGGATGCACACTGAGGAGAACAAGCGCCGCACCTTGCAAAAGAATGACATTGCAGCA
GCGATCACTAGGACTGACATTTATGACTTCTTGGTCGACATTGTTCCCAGGGATGAGATG
AAGGAGGACGGAATTGGGCTTCCTAGGGCTGGTCTGCCACCCATGGGAGCCCCAGCTGAT
GCATATCCATACTACTACATGCCACAGCAGCAGGTGCCTGGTTCTGGAATGGTTTATGGT
GCCCAGCAAGGGCACCCAGTGACTTATTTGTGGCAGGAGCCTCAGCAACAGCAGGAGCAA
GCTCCTGAAGAGCAGCAATCTGCATGA

Peptide Sequence

PEP ID

Zm00001d046967_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:9:113422355:113423101:1 gene:Zm00001d046967 transcript:Zm00001d046967_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CCAAT-HAP5-transcription factor 57 description:Nuclear transcription factor Y subunit C-2
Sequence

MEPSPQPMGVAAGGSQVYPASAYPPAATVAPASVVSAGLQSGQPFPANPGHMSAQHQIVY
QQAQQFHQQLQQQQQQQLQQFWVERMTEIEATTDFKNHNLPLARIKKIMKADEDVRMISA
EAPVVFAKACEIFILELTLRSWMHTEENKRRTLQKNDIAAAITRTDIYDFLVDIVPRDEM
KEDGIGLPRAGLPPMGAPADAYPYYYMPQQQVPGSGMVYGAQQGHPVTYLWQEPQQQQEQ
APEEQQSA

Transcript Sequence

Transcript ID

Zm00001d046967_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:113422355:113423101:1 gene:Zm00001d046967 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CCAAT-HAP5-transcription factor 57 description:Nuclear transcription factor Y subunit C-2
Sequence

ATGGAACCATCCCCTCAGCCTATGGGTGTCGCTGCCGGTGGGTCACAAGTGTATCCTGCC
TCTGCCTATCCGCCTGCAGCAACAGTAGCTCCTGCTTCTGTTGTATCTGCTGGTTTACAG
TCAGGGCAGCCATTCCCAGCCAATCCTGGTCATATGAGTGCTCAGCACCAGATTGTCTAC
CAACAAGCTCAACAATTCCACCAACAGCTCCAGCAGCAACAACAACAGCAGCTTCAGCAG
TTCTGGGTTGAACGCATGACTGAAATTGAGGCGACGACTGATTTCAAGAACCACAACTTG
CCACTTGCGAGGATAAAGAAGATCATGAAGGCCGATGAAGATGTTCGCATGATCTCAGCT
GAAGCTCCTGTAGTCTTTGCAAAAGCTTGTGAGATATTCATACTGGAGCTGACACTTAGG
TCGTGGATGCACACTGAGGAGAACAAGCGCCGCACCTTGCAAAAGAATGACATTGCAGCA
GCGATCACTAGGACTGACATTTATGACTTCTTGGTCGACATTGTTCCCAGGGATGAGATG
AAGGAGGACGGAATTGGGCTTCCTAGGGCTGGTCTGCCACCCATGGGAGCCCCAGCTGAT
GCATATCCATACTACTACATGCCACAGCAGCAGGTGCCTGGTTCTGGAATGGTTTATGGT
GCCCAGCAAGGGCACCCAGTGACTTATTTGTGGCAGGAGCCTCAGCAACAGCAGGAGCAA
GCTCCTGAAGAGCAGCAATCTGCATGA