Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d046959_T004
CDS Infomation

cds chromosome:B73_RefGen_v4:9:113101111:113106466:-1 gene:Zm00001d046959 gene_biotype:protein_coding transcript_biotype:protein_coding description:Thioredoxin O1 mitochondrial
Sequence

ATGGCTCGCCGACTCTGCCGTCTCCCTCGCCTCTTTCCCCTCGTCTCGTCTGCATCCGCC
TCCGCCGCCCCAAGACCTCATCACCTCCCCTTCGCCGTGAACCCTAACCCCGCGCCCCTC
GCCCCCTCCTTCTCGTCGTCATCGCCGCCCGCTTTTCCGGGCCCCCATCGCCTCTTCTCT
TCCACGAGTGGTTCAAGCATGGTGGTCGTGGGCTCCGCGGACTCCTTCAACAGCATCTTT
TCCAAGGTGCAAGATGAAAAGCTACCAGCTGTCTTTTACTACACGGCGGTGTGGTGTGGA
CCATGTAGGGCGATCGCACCTTTAGTATCAAAGCTGAGCAGCCAGTATCCCAAGATACCG
GTGTACAAAGTTGACATTGAATTGGTAAGTCTGCAAATTTAG

Peptide Sequence

PEP ID

Zm00001d046959_P004
PEP Infomation

pep chromosome:B73_RefGen_v4:9:113101111:113106466:-1 gene:Zm00001d046959 transcript:Zm00001d046959_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:Thioredoxin O1 mitochondrial
Sequence

MARRLCRLPRLFPLVSSASASAAPRPHHLPFAVNPNPAPLAPSFSSSSPPAFPGPHRLFS
STSGSSMVVVGSADSFNSIFSKVQDEKLPAVFYYTAVWCGPCRAIAPLVSKLSSQYPKIP
VYKVDIELVSLQI

Transcript Sequence

Transcript ID

Zm00001d046959_T004
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:113101111:113106466:-1 gene:Zm00001d046959 gene_biotype:protein_coding transcript_biotype:protein_coding description:Thioredoxin O1 mitochondrial
Sequence

ATTCTGCAGTATGGCTCGCCGACTCTGCCGTCTCCCTCGCCTCTTTCCCCTCGTCTCGTC
TGCATCCGCCTCCGCCGCCCCAAGACCTCATCACCTCCCCTTCGCCGTGAACCCTAACCC
CGCGCCCCTCGCCCCCTCCTTCTCGTCGTCATCGCCGCCCGCTTTTCCGGGCCCCCATCG
CCTCTTCTCTTCCACGAGTGGTTCAAGCATGGTGGTCGTGGGCTCCGCGGACTCCTTCAA
CAGCATCTTTTCCAAGGTGCAAGATGAAAAGCTACCAGCTGTCTTTTACTACACGGCGGT
GTGGTGTGGACCATGTAGGGCGATCGCACCTTTAGTATCAAAGCTGAGCAGCCAGTATCC
CAAGATACCGGTGTACAAAGTTGACATTGAATTGGTAAGTCTGCAAATTTAGATTTCACT
GCTACTGCGATATGCTAGAAATTGGCTGTTAAGTGTTAGCCGTGGTGAGGTTTCTGAAGC
AGTGAAGAACACAAACGTAAGTTCACTAACTGGAAGAACACAAACGCGAGTGTGTGTACT
GAGAGCTTGTGCTGTGCAATGCCTTGCAGCTGTTCTGGTTTTTTCTCCTATATTATGCAA
TGCAGTGACTAAACATGCTACAAAGCTGGAGGTAATGGTGATCATGTCCCATGCAGTGGA
GTGTCACCATGGCGCGCACGATGCCCAGTCTTCCTGGTCGTGCGCACGCAAGACTTGCTC
AATGGCTTGAGCATCTAGGAATGGATAAACATGCCTAAGTCTATCAGGGTGCCTAAGTCT
ATCGGGATCTGGGGTTTATGCAACATTAAGTAAGCACTAACGTATGGGAATATTAGTATG
CAAAGTCGCAGTTTGCTGCTTCTTCATCACCGCCACATTTACCACTAGTCCACTATACCA
GTTTTAAGATCTCTGCTATACAGTCATAATTGCAGACTGGTGTGGTATTGTTTCCGATGC
TTAACCAGTTAACCTCTAACTATTGGTTCTGACTAACCGATTCAGGTTACATACTGCCTT
TCTAGCATCACAAATTTAAATTCAGGTGAAATCTGTGCAAAATTAGATTTAATGTTGTTA
CTACATTACTGAAGTTGTTCACAACCAGGTTGCCTGTTATGCTATGAAGCATGTATACGG
AAATGCATATTGGTATCGAGCGGATACAGATACACAGATGTTTTAGCATTTCTTAAATAA
ATAAATAACTGTGCAAAATAAAATTCTAAAACCAGGAGCAGCCTAGAAGGAAACAAGAAA
CATTGAAATTGCCACCGTTTGCAGTTTTGATCACCAGTTACTAGTACAGACCTTCAAATG
AATTGCTTATGATGGAGATGGACAGATGGAGGATGAACCACCACCGGTGATCAGCAGCCG
CCAGGCAGATCTGAAGAGGAGGGGGCGAGAGGGAAGCCAGCCGCCAGTGCAAGGAACTGA
AGAGTCGTGTGCTACGTGAAGGGTTTAGAGGGGGGCGGGGTTGCCGTTTTCATATGCCTT
ATAGTCAGGCCGAAAATAGGCAGCCCAAATAAAACTAAACTAATTCTGGTCGTTGTCTTT
TCCAAGTCGGATGACTAATCAATAATCATGATTACAAGCTGATTAGTCAGACGATTGGAC
GACTAGTAGCCCTAATCGTTACTTCCAGTCCGACTTGGCCGATTTAATCATGATCGAACG
ACTTTTTTCTCTCTCAACGTACAGGAGAGCTGCGCATCATTATATTAAGAAGAAATAAGA
AGGTCCAAAATGGACCCAGATACAAGAATTCCCTCCTAAAGAAGTCTAAAGCAAAGGGTC
TCTAGATTTTTGTCAAGTTCTACCGGCAAGAAAGGAGAGACCCTTAGCTTCAGCCATTTC
TCACGACTTGTAACCAATTGTGCGAAATTAGATTTTGTTATGTTTGATCAATGTTGTTAC
TACATTACTGAAGTTGTTTAGAACCAGGCTGCCTGTTATGCTATGAAGCATGGATACCGA
TATCGGTATTGAGCGCATACATATACACATATGTGACATTTTCCCCAAAGCCCGATAGGT
AGATATGTTGTAGCATTCCTTTTTTTGAACATAATGGCAGGAGCTCTGCCTTTCATTTAA
GAAGAATAATAGAATTGGCCCAGTTTTAAGGAAAATCGGGCCTGAAACCTACAGAGGACG
TGATTGGTTGTTGGTTGCTGATGTGCTTGGCGTGAGCCAGCCTAGGTCGGTAGAGAAGGC
CGCGCGCTCGCGTCTCCGCCCATGCAGGGTTATGGGTCGTTTCCTACCTAGGCTGCGTCC
GCCTGTGCAGGCTACGCCGATTAAGTACAGGTAACCAATCATGGTTTCAAGCGTGGTCAA
AGCACGCGCCGGGCCTGGTCGTGCCCGCTCGGGCAACCAATCACACCCAGAGTGCACAAG
CAGCTCAAACAACGATAATCTCCCGCCCCCCAACTACCACCACCACCACACAGACACCCC
CATCCAGAGTCAACGTTGCCGAGCTCAACACAAGGGACAAGCAACTTCGACTCCTCAAGA
CGGGCCGCACATGGCCAAGGGAACACGACGACGCCTACATCGAAACACTAGCACAGAAGG
AGGAAGACCATAGTGCGTCGTGGTTGCCAAGCCTCAACACACATTTCTTAAATAAATAAA
TAACTGCATATTAAAATGCTAAAACTAGGAGCAGGCTAGAAGGAAACAATAAACATTGAA
ATTGCCACCAGTTGCAGTTTTGCTCTTTTACAACTTAAGTACAGGACAATTACCGATATA
TAAGCCACATGTCTCTATTTTGGAAGTGGAGAATTCGGCCACTATTATTAATGGATATTG
TTGATGTGTATAACTTGATTGCCTACTTTCTCGTAACATTTTAAGCTTTTGGGTTGAATT
GGTTGGTGCATGCAACTTAACATGGTATCAAAGCCAGAGGTCTCAAGTTTGAATCCTGGC
AGAGGCTTTATTTGTGCCTTTGTCCCCTTATTTCCACGTTTGCGCCTTTCTCTCTGGCTG
TACGTGAGCGGGGGTGTTGAATTGTATAAGTGGAAGTGGATTGCCTACCTTCTCCTAACA
GCTTAATCTTTTAGGTTGATTTGGTTGATGCATGCAACTTAACATACATGACATCGAGAG
GGAGGGATGGCAGGCCACAGTAGCTATTGCTGCTGTTTGGAGCTTGTGTGGAGAGCATGG
GGAGAGGTAAAACGAGGGAGATGGTGGAGGGACTGATCGTAGGTTCACCTTGGTTGCCCT
GTGGAGCATGGAGTTAATGACCATTGCACCCAGTGAAGAACACATGGAGCTTGGCCGAGT
CTTCGCTGGCTCACCATCAAGAAGTGATACAGCCTGCAAATTGCAGGTGGTGGGTTGTAG
CACTCTCGCAGACTAGAGGGCGGGGATCGATACATGCACGTCTCTGGTACATCCGCTAGG
GCAACAGCAAGGAAGGCATACTGGGACTGGGCAGTATCCGAAATCAGGGTGTCATGTATC
GGAAGTCATTTTTTATTTTTTATTTTTCATATGGTGTTGATAGCTAAAGGGGCTCTAGCC
TAGTGGCTAAGGGCTTCCGAGTAGCACCTTCAATTCATGGGTTCTATCCCCCTCATGGGC
GAATTTTCAGGCTTGGTTAAAAAAATCCCCTCGTTGTGCCTCATCCGCTCTCGGGTTACG
ATGTCCTGTGCGCCACCTTCCGGTTGGGCCATTAGAGAGTGGACGGTTGACGCTGGCCCG
TTAGTGATGGGGGTCAGGGTTCAGGGATTTTCTCAGCCGGGACCATTGTTCCGGTCTCTT
CTTAATATAATACCGGGAGGACGGTCTTCCCTCCTCGGCCGAGTTTTCATATGGCGTGGA
TTTGTGTCCACCGCATAACCAAAGTGTATATGTATCGGATCATATGGGATACGGCCTCCC
CCTTAAATATACTTAGTTGTTATGTAGATGACAATTGTTTATTAGGTTTTGGACTAGAAC
CATGTCTATAGTGGTTGTTTTCACATCAAAATGAATATTTTTTTAATACAATGTAAACTG
AAGTTCCATTGGTTTCCAGGAGACCAGGACAGAACTCATGCATTATAATAAAACAAACAA
CATATTTGAAACTGTCAATTTATTCTTACTTTGATCTTGCTTGTTGTGCTATTTATATTG
TTGATAATGTTTTTTTATTTATTGTATTCGCTTTGCATTGCAGGAAGGACTGGGAAACAA
ACTCCGTGATCTAAACATATGTTCAGTGCCGACGTTCCACTTCTATCACAAGGGGCAGAG
AATTAGTGAAATCGTGGGTGCTGATGCAAAGAAAATTGAAGCTACCATGGAAAGTCTCCA
CAAGCAGCAGTAGAAGTTTCAGAGCAGAGCCTCAACCTCACACCAATGGAATGGTTTAAT
CTACCTCGCATGAGAAGTGTTGCGCACTTTTGGATTCGTGTTTTTCTTTACGTGTCACAC
CGTGTGAACGCCAGCGTTTCGTCATCAGATGCTTGTGATTCGTGCCGGCTTGTTTCATGT
GAAGACATCAGATGCTTGTGTTTCGTGCCGGCTTGTTTTGAGTTTTGGGTCTTGAGCTTC
GGCGACTCTGTCCAGAGCTGCGGATGTTTCTCATGCTTGGAATGAGTGAGATGGGTTGAA
AATGGC