Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d046919_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:9:110691826:110696403:1 gene:Zm00001d046919 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chloride channel protein CLC-b
Sequence	ATGGAGGAAGAGCAGAGCCCAAGGCTGGGCCGGGATCCGGCGACCGAGCCCAGTCCTGCG CCGGAATGGCCGGATTCGGACAGCAAGAACGACGACAGTGCGAACGACCCGGAGGACCCT GCCGGCGGCAGCGGCAGCGGCAGCGGCAACGGCATCAGCTCCTTGGAGCAGCCGCTGCTC AAGCGGAGCACCACCCTGACGGCCAGCCACCTGGCCATCGTCGGCGCCAAGGTCTCCCAC ATCGAGAGCCTCGACTACGAGATCATCGAGAACGACCTGTTCAAGCACGACTGGCGGAGC CGCTCCAACGTCGAGGTGCTTCAGTACATCTTCCTCAAGTGGGCCATGGCGTTCCTCGTC GGCCTCCTCACCGGCGTCATCGCGTCCCTCATCAACCTCGCCATCGAGAACATCTCCGGC CTCAAGATGCTCCAGATGGTCAACCTCGTCCGCGGGAAGCGCTACTGGGCGGGCTTCCTC TACTTCGCCGGCGTCAACTTCGCGCTCACCTTCGTCGCCGCGGTGCTCTGCGTCGTCTTC GCCCCCACCGCCGCTGGCCCTGGCATCCCCGAGATCAAGGCTTATCTCAACGGCGTCGAC ACGCCCAACATGTTCGGCGCGCCGCAGCTCATCGTCAAGATCATCGGCAGCATCGGCGCC GTGTCGTCGGGGATGGATCTCGGCAAGGAGGGCCCGCTGGTGCACATCGGCGCGTGCCTG GCCAACCTGCTCAGCCAGGGCGGCGAGGGCCGGTGGCGCCTGCGCTGGCGGTGGCTGCGC TACTTCAACAACGACCGCGACCGCCGGGACCTGATCACGTGCGGCGCGTCGTCCGGGGTG TGCGCGGCGTTCCGCGCGCCCGTCGGCGGCGTGCTGTTCGCGCTGGAGGAGGTGGCGACG TGGTGGCGCAGCGCGCTGCTTTGGCGCACCTTCTTCAGCACGGCCACCGTCGTGGTGGTG CTGCGCGGCTTCATCGAGGTGTGCAGGGACGGGCGCTGCGGCATGTTCGGCGAGGGCGGG CTCATCCTCTTCGACGTCAGTGACGTCACCGTCCGCTACCACGTCGGCGACCTCCTCCCC GTCACGCTCGTCGGCGTCCTCGGCGGGGTCCTGGGGGCACTCTACAACCACGTCCTCCAC CAGGTGCTCCGGCTGTACAACCTGATCAACGCCAAGGGCCGGCTGGCGAAGCTGGCGCTC GCCCTCGCGGTGTCCGTGTTCACGTCGGCGGGGCTGTACCTCCTGCCGTTCGCTGTGCCG TGCACGCCGTGCGACCCGGCGTTCGGCGACGCGTGCCCGACGGTGGGCAAGTCCGGCAAC TTCAAGCAGTTCAACTGCCCCACCGGCTACTACAACGACCTGGCGTCGCTGCTCCACGCC ACCAACGTGGACGCCACGCGCAACATCTTCTCCACGGGCACCGCCGGCGAATTCAGGCTC GACTCGCTGCTCATCTTCTTCGGCATCTACTGCGTGCTGGGGCTCTTCACCTTCGGCATC GCTGTGCCGTCGGGGCTCTTCCTGCCCATCATCCTCATGGGCTCCGCCTACGGCCGCATC CTGGCGCTCGTGCTCGCGCGCTTCGTGAGGATCGACCACGGCCTCTACGCCGTGCTCGGC GCCGCCGCGCTCATGTCGGGCTCCATGAGGATGACCGTCTCGCTGTGCGTCATCTTCCTC GAGCTCACCAACAACCTCCTCCTGCTCCCCATCACCATGTTCGTGCTGCTCATCGCCAAG ACGGTGGGCGACGCTTTCAACCCCAGCATCTACGAGATCATCCTCGACCTCAAGGGCCTG CCGTTCCTTGAGCCCAAGCCGGAAACGTGGATGAAGGACCTCGCAGTCGGCGAGCTCGCG GCCGCCAAGCCGCGGGTCGTCACGCTGCAGGTGATCGAGAAGGTGTCCACCGTCGTGGAG GTGCTGAGGTCCACGCCGCACAACGGGTTCCCCGTGCTGGACTGGCCGCGGCCAGGCGTA TCGGAGCTCCACGGGCTGGTGCTCCGGTCCCACCTGATGGCCGTGCTCAAGAAGCGGTGG TTCCTGACGGACAAGAGGAGGACGGAGGAATGGGAGGCCCGTGAGAGGTTCTCGTCGACG GAGCTCGCGGAGAAGTCCGGGAGTATCGACGAGGTGGCGGTGCAGCTGACGCCGGAGGAG CTGGACATGTACATTGACCTCCACCCGTTCACCAACACCACGCCGTACACCGTCGTGGAG ACCATGTCGGTGGCCAAGGCCGTGGTGCTCTTCCGCACCTGCGCGCTCCGGCACATGCTT ATCATCCCAAAGTTCCAAGGGCCTGAGATAGCTCCAATCGTGGGGATCCTAACGAGGCAG GACCTGAGGGCACACAACATCCTTGGTGCATTCCCTCATTTGGCAAACAAAAGGAAAGTA CACTAA

Peptide Sequence

PEP ID	Zm00001d046919_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:9:110691826:110696403:1 gene:Zm00001d046919 transcript:Zm00001d046919_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chloride channel protein CLC-b
Sequence	MEEEQSPRLGRDPATEPSPAPEWPDSDSKNDDSANDPEDPAGGSGSGSGNGISSLEQPLL KRSTTLTASHLAIVGAKVSHIESLDYEIIENDLFKHDWRSRSNVEVLQYIFLKWAMAFLV GLLTGVIASLINLAIENISGLKMLQMVNLVRGKRYWAGFLYFAGVNFALTFVAAVLCVVF APTAAGPGIPEIKAYLNGVDTPNMFGAPQLIVKIIGSIGAVSSGMDLGKEGPLVHIGACL ANLLSQGGEGRWRLRWRWLRYFNNDRDRRDLITCGASSGVCAAFRAPVGGVLFALEEVAT WWRSALLWRTFFSTATVVVVLRGFIEVCRDGRCGMFGEGGLILFDVSDVTVRYHVGDLLP VTLVGVLGGVLGALYNHVLHQVLRLYNLINAKGRLAKLALALAVSVFTSAGLYLLPFAVP CTPCDPAFGDACPTVGKSGNFKQFNCPTGYYNDLASLLHATNVDATRNIFSTGTAGEFRL DSLLIFFGIYCVLGLFTFGIAVPSGLFLPIILMGSAYGRILALVLARFVRIDHGLYAVLG AAALMSGSMRMTVSLCVIFLELTNNLLLLPITMFVLLIAKTVGDAFNPSIYEIILDLKGL PFLEPKPETWMKDLAVGELAAAKPRVVTLQVIEKVSTVVEVLRSTPHNGFPVLDWPRPGV SELHGLVLRSHLMAVLKKRWFLTDKRRTEEWEARERFSSTELAEKSGSIDEVAVQLTPEE LDMYIDLHPFTNTTPYTVVETMSVAKAVVLFRTCALRHMLIIPKFQGPEIAPIVGILTRQ DLRAHNILGAFPHLANKRKVH

Transcript Sequence

Transcript ID	Zm00001d046919_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:110691826:110696403:1 gene:Zm00001d046919 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chloride channel protein CLC-b
Sequence	ATCCAATTGCTTGCTTCAGACTTCAGAGGCTAGAGGCAATAGTTCTCTCTCCCGGTCCCG GGGAAAGCCATGGAGGAAGAGCAGAGCCCAAGGCTGGGCCGGGATCCGGCGACCGAGCCC AGTCCTGCGCCGGAATGGCCGGATTCGGACAGCAAGAACGACGACAGTGCGAACGACCCG GAGGACCCTGCCGGCGGCAGCGGCAGCGGCAGCGGCAACGGCATCAGCTCCTTGGAGCAG CCGCTGCTCAAGCGGAGCACCACCCTGACGGCCAGCCACCTGGCCATCGTCGGCGCCAAG GTCTCCCACATCGAGAGCCTCGACTACGAGATCATCGAGAACGACCTGTTCAAGCACGAC TGGCGGAGCCGCTCCAACGTCGAGGTGCTTCAGTACATCTTCCTCAAGTGGGCCATGGCG TTCCTCGTCGGCCTCCTCACCGGCGTCATCGCGTCCCTCATCAACCTCGCCATCGAGAAC ATCTCCGGCCTCAAGATGCTCCAGATGGTCAACCTCGTCCGCGGGAAGCGCTACTGGGCG GGCTTCCTCTACTTCGCCGGCGTCAACTTCGCGCTCACCTTCGTCGCCGCGGTGCTCTGC GTCGTCTTCGCCCCCACCGCCGCTGGCCCTGGCATCCCCGAGATCAAGGCTTATCTCAAC GGCGTCGACACGCCCAACATGTTCGGCGCGCCGCAGCTCATCGTCAAGATCATCGGCAGC ATCGGCGCCGTGTCGTCGGGGATGGATCTCGGCAAGGAGGGCCCGCTGGTGCACATCGGC GCGTGCCTGGCCAACCTGCTCAGCCAGGGCGGCGAGGGCCGGTGGCGCCTGCGCTGGCGG TGGCTGCGCTACTTCAACAACGACCGCGACCGCCGGGACCTGATCACGTGCGGCGCGTCG TCCGGGGTGTGCGCGGCGTTCCGCGCGCCCGTCGGCGGCGTGCTGTTCGCGCTGGAGGAG GTGGCGACGTGGTGGCGCAGCGCGCTGCTTTGGCGCACCTTCTTCAGCACGGCCACCGTC GTGGTGGTGCTGCGCGGCTTCATCGAGGTGTGCAGGGACGGGCGCTGCGGCATGTTCGGC GAGGGCGGGCTCATCCTCTTCGACGTCAGTGACGTCACCGTCCGCTACCACGTCGGCGAC CTCCTCCCCGTCACGCTCGTCGGCGTCCTCGGCGGGGTCCTGGGGGCACTCTACAACCAC GTCCTCCACCAGGTGCTCCGGCTGTACAACCTGATCAACGCCAAGGGCCGGCTGGCGAAG CTGGCGCTCGCCCTCGCGGTGTCCGTGTTCACGTCGGCGGGGCTGTACCTCCTGCCGTTC GCTGTGCCGTGCACGCCGTGCGACCCGGCGTTCGGCGACGCGTGCCCGACGGTGGGCAAG TCCGGCAACTTCAAGCAGTTCAACTGCCCCACCGGCTACTACAACGACCTGGCGTCGCTG CTCCACGCCACCAACGTGGACGCCACGCGCAACATCTTCTCCACGGGCACCGCCGGCGAA TTCAGGCTCGACTCGCTGCTCATCTTCTTCGGCATCTACTGCGTGCTGGGGCTCTTCACC TTCGGCATCGCTGTGCCGTCGGGGCTCTTCCTGCCCATCATCCTCATGGGCTCCGCCTAC GGCCGCATCCTGGCGCTCGTGCTCGCGCGCTTCGTGAGGATCGACCACGGCCTCTACGCC GTGCTCGGCGCCGCCGCGCTCATGTCGGGCTCCATGAGGATGACCGTCTCGCTGTGCGTC ATCTTCCTCGAGCTCACCAACAACCTCCTCCTGCTCCCCATCACCATGTTCGTGCTGCTC ATCGCCAAGACGGTGGGCGACGCTTTCAACCCCAGCATCTACGAGATCATCCTCGACCTC AAGGGCCTGCCGTTCCTTGAGCCCAAGCCGGAAACGTGGATGAAGGACCTCGCAGTCGGC GAGCTCGCGGCCGCCAAGCCGCGGGTCGTCACGCTGCAGGTGATCGAGAAGGTGTCCACC GTCGTGGAGGTGCTGAGGTCCACGCCGCACAACGGGTTCCCCGTGCTGGACTGGCCGCGG CCAGGCGTATCGGAGCTCCACGGGCTGGTGCTCCGGTCCCACCTGATGGCCGTGCTCAAG AAGCGGTGGTTCCTGACGGACAAGAGGAGGACGGAGGAATGGGAGGCCCGTGAGAGGTTC TCGTCGACGGAGCTCGCGGAGAAGTCCGGGAGTATCGACGAGGTGGCGGTGCAGCTGACG CCGGAGGAGCTGGACATGTACATTGACCTCCACCCGTTCACCAACACCACGCCGTACACC GTCGTGGAGACCATGTCGGTGGCCAAGGCCGTGGTGCTCTTCCGCACCTGCGCGCTCCGG CACATGCTTATCATCCCAAAGTTCCAAGGGCCTGAGATAGCTCCAATCGTGGGGATCCTA ACGAGGCAGGACCTGAGGGCACACAACATCCTTGGTGCATTCCCTCATTTGGCAAACAAA AGGAAAGTACACTAAGCTCTGTCGCGCCATTTTTGGTAAATTTAATGTTCTCTGCATCCA AAGAAAAAGGTCCAGCTGTTTTGTTTCCCCATGTTCTATTTTTCTCTGTAAGTAGATTGA GGATTTAATTTCTTGTCTCATGAGATTGTGTGAATAATAGCTTCCCATGTAAAATCACAT CTTCACCTTCACTTTTCTGCTCGCACTTCGATCCTTGTAATCAAAAGGGGCAAACAAAAC AACTACGAAATATACATTTTTTGGGAGATGTTTCGAATTGCTATTACTTGATTATTTTGC TTCGTTCTACATTATAAGAGATAACAGTGTTTAGTCGCAATTTGCTAAAGGTTCAGGCAC AGACTCACAGTCAATTTGGTGGGTCAACCAGAAAGACAACTCTTGAGTTAACGACACAGC GCATAGACCAGCAAATTCCAAAAGATTTTCGAATTCATCCAACTGTAAATACTGAACTTT ACTGGTTTAAAGCGGACCCCTGCCTTTGTTTTGGCCTTTTGCGTAAGCCAGCATGGATTG TGGACCGGGACCGCTAGGCGCTAGGGATGCAATAATGCTTGTTTTGTTTATTTCAACTAA TAATGTGTGCAGAATGACGTAACAAAAAACTAAACTTAGCCGTGAAACCGGTTTTGTATT TGGGACGTTCTATACATACCATACAATGACGCACACCTCTAGCTCGAAAAATGTACAGAA TAACATTTTTGTAGGGCTAGTTTGGATAACCTGTTCCCACAGGGATCCTCGTCCAATCCG CGGCGCGGGGAGGCGAGGCCTGTTTAGACCCTGACCTCCCATGCCACACCCTGTCTAAGG TGCAGCAGCCGATTTAGCCGCCACAACTGCGGTGCCGGAAGTGTGGCGCGGCGTGGGGAC AGCGGCGGTGATCCAAACAGGCCCTTTCTTCCCTAACTATTCTATGCTCCTGTGTGGATG TATTACGGGTCAATTTTAAGTAGTAAGGGAATTACTTCCCATATATCTTATTTAAATGAT ATTTTTTTATTGCTATCCTGGTAAATGACAGATTTTAAGGGGATTTGAGTTTTCAAACTA GCTAGCTCTAAGACTTTTTGCGAATGGACTTTGCTATAACCGTTAGAAGAAAATCGCACT TTTTATCTTGGAGCTAAATAGCGTATTTGGTTTGAGAAATGAACTATTCTACCATCTTCT TGCTTGTTTTTGGTTTATGAAATAAAATGAGTTAATTTATCGTCATCTTATTCCTCACAA GTTAATAAATAGTATCATCTAAATGCACCATGACATCTAAGAAATGGATGAATCAGACAA CTTTAAAAAAGCTATAATTCGAAGTTTTATACTTTTAGCATGTCTAACATACAATTCTCT GATATGCCGACACAACAATTTTCTCCAGTATTCTATTTGTCATGGTAAATGTCCTAATCT CTTCTATACCACACGGATGCAACTTTTTACCATTCTATGCCATCACCAGTAGCATAGAAG GGTAAGAAAATTAAAGGTGTAATCTCTTATATGCCACTAAGGATTAGAATATTTGCGATG ATAAATAAGGTACCGAACAAAATTGCAATGTTGTACAGAGAATTATCTTGTTCTTCTATT AGGTGAACCTACTACCAACTAAAATTACAAAAGACCCTACCTTGTAGCCATTTAGTTTTC ATGGTCTTGGTGTGGAGTGTGGACCGCTCCAAACAAGACATGAAACGGTCTTTTGGAGAT TGCAGACATCTTATCAGTTCTTCT