Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d046915_T006
CDS Infomation

cds chromosome:B73_RefGen_v4:9:110362604:110367052:1 gene:Zm00001d046915 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative AMP-dependent synthetase and ligase superfamily protein

Sequence

ATGACCGAGGCGGGGCCCGTGCTGGCCATGTGCCTGGCCTTCGCCAAGGAGCCGTTCGAG
GTCAAGTCCGGCTCCTGTGGCACCGTCGTCAGGAACGCGGAGCTGAAGATCGTCGACCCA
GACACCAGCGCGTCGCTGGGACGGAACCAGCCAGGCGAGATATGCATCCGCGGCGAACAA
ATCATGAAAGGTTATCTGAATGATCCAGAGGCGACAAAGAACACCATTGATAAGGACGGA
TGGCTGCACACCGGGGACATTGGTTATGTGGACGATGACGACGAGATCTTCATCGTTGAC
AGGCTGAAGGAGATAATCAAATACAAGGGCTTCCAAGTACCTCCTGCGGAGCTTGAAGCC
CTTCTCATCACACATCCTGAAATCAAGGATGCCGCTGTTGTCTCGATGAAAGATGAAGTC
GCCGGCGAAGTCCCGGTGGCATTCATTATACGCAGTGAAGGCTCTGAGATCAGTGAGAAC
GAGATCAAGCAGTTTGTTGCAAAGGAGGTCGTGTTCTACAAGAGGATCAACAGAGTTTTC
TTCACGGATTCTATCCCGAAGAATCCCTCCGGCAAGATTCTTAGGAAGGACCTGAGAGCG
CGGCTTGCCGCGGGCATCCCAAGCAGTGACAACACACAGTCCAAAAGTTGA

Peptide Sequence

PEP ID

Zm00001d046915_P006
PEP Infomation

pep chromosome:B73_RefGen_v4:9:110362604:110367052:1 gene:Zm00001d046915 transcript:Zm00001d046915_T006 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative AMP-dependent synthetase and ligase superfamily protein

Sequence

MTEAGPVLAMCLAFAKEPFEVKSGSCGTVVRNAELKIVDPDTSASLGRNQPGEICIRGEQ
IMKGYLNDPEATKNTIDKDGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEA
LLITHPEIKDAAVVSMKDEVAGEVPVAFIIRSEGSEISENEIKQFVAKEVVFYKRINRVF
FTDSIPKNPSGKILRKDLRARLAAGIPSSDNTQSKS

Transcript Sequence

Transcript ID

Zm00001d046915_T006
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:110362604:110367052:1 gene:Zm00001d046915 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative AMP-dependent synthetase and ligase superfamily protein

Sequence

GTGGTGAAAGGTCGGTGCGCACGGCAAGCCCATGATTCCGGTTGCCGTCTCGCTAAGAAA
GCATTTCGTTCAACCACTTGTTCCGGTCTTTTCCTCCCAGACTCTGGGTGGGCGAGTCCC
ACCACGGATGCCGGTGCACCTACATCGTTGTACTTGTACAAGACCGAGACGATAGGTTTT
GTCTGTTGAAACGGGAATGTGATGTTTACGAATAACCTCTGTTCGTTTCCACCAGGGGTA
CGGGATGACCGAGGCGGGGCCCGTGCTGGCCATGTGCCTGGCCTTCGCCAAGGAGCCGTT
CGAGGTCAAGTCCGGCTCCTGTGGCACCGTCGTCAGGAACGCGGAGCTGAAGATCGTCGA
CCCAGACACCAGCGCGTCGCTGGGACGGAACCAGCCAGGCGAGATATGCATCCGCGGCGA
ACAAATCATGAAAGGTTATCTGAATGATCCAGAGGCGACAAAGAACACCATTGATAAGGA
CGGATGGCTGCACACCGGGGACATTGGTTATGTGGACGATGACGACGAGATCTTCATCGT
TGACAGGCTGAAGGAGATAATCAAATACAAGGGCTTCCAAGTACCTCCTGCGGAGCTTGA
AGCCCTTCTCATCACACATCCTGAAATCAAGGATGCCGCTGTTGTCTCGATGAAAGATGA
AGTCGCCGGCGAAGTCCCGGTGGCATTCATTATACGCAGTGAAGGCTCTGAGATCAGTGA
GAACGAGATCAAGCAGTTTGTTGCAAAGGAGGTCGTGTTCTACAAGAGGATCAACAGAGT
TTTCTTCACGGATTCTATCCCGAAGAATCCCTCCGGCAAGATTCTTAGGAAGGACCTGAG
AGCGCGGCTTGCCGCGGGCATCCCAAGCAGTGACAACACACAGTCCAAAAGTTGATACGT
ACTTTCGTACTATTCTTTTCTAGCTGTGCCAAAAATCATGCTGTGCTCTATTCATGAGAT
GGCAATGGTATACACAAAACGCCAAGCGGTCGTTATCGATTCTTCTAGATGGGCAAGGGT
AAGGTATACTTCGTTTGTGTCCGACATATTATGTATTTGTATCATGTATAGATACGTTTT
GTTGACAACAAGTGCTAATTATAATGTATACCATGTTTGGGAACCTATTGTTCTTGTTAA
TAAAGAGTCGACCCCTGTCC