Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d046910_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:9:110061249:110076116:-1 gene:Zm00001d046910 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGTCATCCGCCGTGAGGGGCGACACCCCTCGCCGGCCGTCGGCGTTTGCCGGGGCC
TCGCCGCCTCCTCCCCCGCCCCCGCCGCCGAGGGGTTGGCTCGCGGGTCTCGTCTCCGGC
GCCGGCCGGATCCTCGCCGCCGTGCTCGGGCCCGAGCCCTCCTCTTCCGGCTCCGGCTCC
ATTGCCTCATCTGCAGCGTCGGACGGGGACTCGCCGTCGGCCTCGTACTCGCCGGCATGG
TTCCCGCCTCCTGGCCCGCACGGCGAGGGTTGCAATGACGCCACCGATAACAATGATTCC
CCAGTCTTTCCCCTGAGTAATAATCAGTCAAATCAGGGTAAAAAGGAGACTGCTCTAAAA
GACTACACGGGGTCCCTAGCAATTATCTCTGAGATTGAACCAAAGGATGCCATAATGCAA
TTGCTTATGCAGGAAACCTATTCAAGGTCCGAGTGCAGCAAGTTTATAAAGATAATTCAA
GAGCGGGTTTTAGATTCAGATTCAGGTGATATAGATGCTGGTGGGTTTGCTCTCACTAGT
GCTCGGAAGGCTAGCAGACTAGCCGTAGATGGGTACTCTTCATTTAGTCCACATGAATCC
TCACCTGCAACTTCTAGTCTTCAAATGCATGGCTGTGATAATAGTGCTGCTGTGGGCACA
ATTCCAAAATTAACTCATACCAACCAAAGCCCTTTCATCAACAATGCTAAGAACATAAAC
CCAGTTCTCAAACGAAATTACTCTGTTAGAGAGGATCCATATGGGGAGATTCGAAGAGTG
AGACCAAAGATCAATGGAAATTCATGGGACATTTCAAAATTCAAGCAAGTTGATATTATT
CGAAATCATCCAGCTGCAAATTCACGTGAAGAGCTCACTGCCAGGAATCCAAATGCTTCC
AGAGATGGAAAGAAACTATTAAAGGATATTATGGGAGCCAGCAATTTAACATACCCTAAC
TTTATTTCAAAAGCTGAAACCGCTGATGAAACATCAGATGTCCCCGATAAACCTTCAGCT
GTAACCCCACAACAACATGATTCCAGCTTCCCGCAAGCTGGTAAGAAACAAAAAGGTTTT
GCTGCTACAACACTTAATCAGTGTTCTAATGAGGACCTGAAGAAAGGCTTTGCTTTGAAG
GTGGAGCCTTTGAATGCATTTATTCCTTTCGAGCAGCAGATGATGGACCTATCTCACAGG
AAGCAAGAGAATGCTGCCTGTGACGATTCATGCTCTCTCTCAAAACTAATGTTGAAGGAG
GATATTGAGGCTGCACCCAGGTTAAAATTCCTTCGAAAGTTAAAAATAAAGGATTCTGTA
AACGTGTCTTTCAGCCTGCCGACGGGCATTCAAGTACAGAATGGCTCCAAGAACCGCAGG
AGGAGGCAGCCCAACGTACAGAAGACCACGGCGACTCCAACAAGGTCGCCTGCAAGGGGT
CAGCGTCGAAAGAACAACGATGCCATGGTCAAATCGGAGATGGGCTTGATTGAGCAGAGT
AAACTTGTGCTGACGGAACAAGAGCCAGAGCTGGGAGACGTTCCGGTGAAGAGACCCGTT
GGGAGGCCCAGGAAGGCGAGGTAG

Peptide Sequence

PEP ID

Zm00001d046910_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:9:110061249:110076116:-1 gene:Zm00001d046910 transcript:Zm00001d046910_T001 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MESSAVRGDTPRRPSAFAGASPPPPPPPPPRGWLAGLVSGAGRILAAVLGPEPSSSGSGS
IASSAASDGDSPSASYSPAWFPPPGPHGEGCNDATDNNDSPVFPLSNNQSNQGKKETALK
DYTGSLAIISEIEPKDAIMQLLMQETYSRSECSKFIKIIQERVLDSDSGDIDAGGFALTS
ARKASRLAVDGYSSFSPHESSPATSSLQMHGCDNSAAVGTIPKLTHTNQSPFINNAKNIN
PVLKRNYSVREDPYGEIRRVRPKINGNSWDISKFKQVDIIRNHPAANSREELTARNPNAS
RDGKKLLKDIMGASNLTYPNFISKAETADETSDVPDKPSAVTPQQHDSSFPQAGKKQKGF
AATTLNQCSNEDLKKGFALKVEPLNAFIPFEQQMMDLSHRKQENAACDDSCSLSKLMLKE
DIEAAPRLKFLRKLKIKDSVNVSFSLPTGIQVQNGSKNRRRRQPNVQKTTATPTRSPARG
QRRKNNDAMVKSEMGLIEQSKLVLTEQEPELGDVPVKRPVGRPRKAR

Transcript Sequence

Transcript ID

Zm00001d046910_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:110061249:110076116:-1 gene:Zm00001d046910 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GCACGCGCCTCCTCTCATGGAGTCATCCGCCGTGAGGGGCGACACCCCTCGCCGGCCGTC
GGCGTTTGCCGGGGCCTCGCCGCCTCCTCCCCCGCCCCCGCCGCCGAGGGGTTGGCTCGC
GGGTCTCGTCTCCGGCGCCGGCCGGATCCTCGCCGCCGTGCTCGGGCCCGAGCCCTCCTC
TTCCGGCTCCGGCTCCATTGCCTCATCTGCAGCGTCGGACGGGGACTCGCCGTCGGCCTC
GTACTCGCCGGCATGGTTCCCGCCTCCTGGCCCGCACGGCGAGGGTTGCAATGACGCCAC
CGATAACAATGATTCCCCAGTCTTTCCCCTGAGTAATAATCAGTCAAATCAGGGTAAAAA
GGAGACTGCTCTAAAAGACTACACGGGGTCCCTAGCAATTATCTCTGAGATTGAACCAAA
GGATGCCATAATGCAATTGCTTATGCAGGAAACCTATTCAAGGTCCGAGTGCAGCAAGTT
TATAAAGATAATTCAAGAGCGGGTTTTAGATTCAGATTCAGGTGATATAGATGCTGGTGG
GTTTGCTCTCACTAGTGCTCGGAAGGCTAGCAGACTAGCCGTAGATGGGTACTCTTCATT
TAGTCCACATGAATCCTCACCTGCAACTTCTAGTCTTCAAATGCATGGCTGTGATAATAG
TGCTGCTGTGGGCACAATTCCAAAATTAACTCATACCAACCAAAGCCCTTTCATCAACAA
TGCTAAGAACATAAACCCAGTTCTCAAACGAAATTACTCTGTTAGAGAGGATCCATATGG
GGAGATTCGAAGAGTGAGACCAAAGATCAATGGAAATTCATGGGACATTTCAAAATTCAA
GCAAGTTGATATTATTCGAAATCATCCAGCTGCAAATTCACGTGAAGAGCTCACTGCCAG
GAATCCAAATGCTTCCAGAGATGGAAAGAAACTATTAAAGGATATTATGGGAGCCAGCAA
TTTAACATACCCTAACTTTATTTCAAAAGCTGAAACCGCTGATGAAACATCAGATGTCCC
CGATAAACCTTCAGCTGTAACCCCACAACAACATGATTCCAGCTTCCCGCAAGCTGGTAA
GAAACAAAAAGGTTTTGCTGCTACAACACTTAATCAGTGTTCTAATGAGGACCTGAAGAA
AGGCTTTGCTTTGAAGGTGGAGCCTTTGAATGCATTTATTCCTTTCGAGCAGCAGATGAT
GGACCTATCTCACAGGAAGCAAGAGAATGCTGCCTGTGACGATTCATGCTCTCTCTCAAA
ACTAATGTTGAAGGAGGATATTGAGGCTGCACCCAGGTTAAAATTCCTTCGAAAGTTAAA
AATAAAGGATTCTGTAAACGTGTCTTTCAGCCTGCCGACGGGCATTCAAGTACAGAATGG
CTCCAAGAACCGCAGGAGGAGGCAGCCCAACGTACAGAAGACCACGGCGACTCCAACAAG
GTCGCCTGCAAGGGGTCAGCGTCGAAAGAACAACGATGCCATGGTCAAATCGGAGATGGG
CTTGATTGAGCAGAGTAAACTTGTGCTGACGGAACAAGAGCCAGAGCTGGGAGACGTTCC
GGTGAAGAGACCCGTTGGGAGGCCCAGGAAGGCGAGGTAG