Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d046889_T008
CDS Infomation	cds chromosome:B73_RefGen_v4:9:108888332:108896721:-1 gene:Zm00001d046889 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein STRUBBELIG-RECEPTOR FAMILY 1
Sequence	ATGCAGCGGGCTCCGGAGCGCCGCCGCGGCGCCGGGCCGCTCCTGCTGCTGGCGCTGCTC GTCGCATTGGCGGCCGCGCCCAGACTCGTGCGCGCGGTCACCGACGCTACCGACGTCTCT GCCATAAACGGACTGTACATGTCACTGGGATCACCACTTCTACCTGGATGGACTGGAAAT GGTGGAGACCCGTGCGGTGAGAGCTGGCAGGGTGTTGTGTGTACCGGCTCTTCCATAACT GGAATAACCATGAATGCTGCAAACTTGGGAGGACAGTTGGGAAGTTTAGGAAACTTCACT GCCATCACCAGCTTAGAGCTTAACAACAATAATATTGGTGGAACCATACCGGAGGACCTA CCTGTTACATTGCAGAGTCTTTTCCTCTCTGCTAATCAACTTACTGGAAGCATCCCAAGT TCACTGTCAAAACTCGAAAACTTAACAGCCATGTCAGTCAACGGCAACCATCTAAATGGA GACCTACCAGACACTTTTGATTCACTCAATAGACTTGTAAATTTGGATATTTCTTCGAAC AACTTGAGTGGTGTGTTACCATCTTCAATGAAAAACCTGGCATCTTTGACTTCATTGCAC ATGCAAGATAATCAACTGTCTGGGACCCTTAACGTTTTGCAGGATCTCCCACTGAAAGAC TTGAACATAGAGAATAATCTTTTTTCTGGACCGGTGCCTGCGAGTTTGCTTAACATACCA AACTTCAAAAAGGACGGGAATCCATTCAATACCAGCATCGTCCCATCTGCATCTCCGCCT TCAACAGGACCAGCTCCAACACCAGCAGCATCAAAACCAGCTCCAACACCAGCACCCACC ACTTCAAATTCAACGCCCCCAGCACCAGCACCCTCATTTCCTTCAAGATCTCCTCCCCCG CCTAAAACAACCTCAAACTCTTCTGAAGGATCAACTACCCGAGATAGCACTTCACCATCT AAGAAACACAGTACATCAACCCTCAAGATTGTTGGCTTTGTTCTTGCCGGAGTAGTGCTG TTTATTATCATAGTCCTCCTAGTATTATTTTGTCTATCCAAGTACCAAGAGAGACGGTCG AGATATGATCATAACAGAAGTCAGCAGGCAAGGGTGCATCATAGGGTTGAACCGCAAATC AAGCCACCTCCAGTGCAACAAAGCAATGATCTTAAAAAAGGTTCAGGTGAGGTACTTGAT AGAAGGGGCCATGAACTAAGTTCATCAACGGCAGCTCTCGCAAAGAAATCTCCTGAAAAC CAAAAGGAGCATGTAATTAATTTTGATCGAACAGATTCAGATCTGTTTCCTGTTTCTCTA CCACCACCACCTCCTCCACCTCCATTACCCCCAATTGAAAGAGTTATTGCAAATCCCATT GTTCCACCAGAAAAGCGATATAGTCCTCCACCAAAGACAAGTAGCTCTACTTCTGCCACA TCATTCTCTATTGCATCTCTTCAGCAATATACAAATAGCTTCAGAGAGGAGAATGTGATA AGAGAGAGTAGATTAGGAAAGGTTTACCTAGCAGAGCTTCCTGATGGCAAGTTATTGGAG GTTTTGAAGATTGACAATGCTAATGGAAGAATATCAGTAGATGACTTCCTAGAAGAGGTT GAATGTATCTTAGATATCAAGCATCCTAACATTCTTGAGTTAGTCGGATACTGTGCTGAA TATGGGCAGAGGTTACTTGTGTACAATCACTTTAGCAGAACGACACTAGATGACACACTT CATGATGGAGAGGATACTGAAAGTGCACTGTCATGGAATGCCCGCCTCCAGGTTGCTCTT GGTTCTGGAAAAGCCTTAGAGTATCTCCATGCTAGCTTCCAACCTCCAATTGTGCACCAG AATTTTGAACCAGCTAATGTGCTCCTTGACAAAAAGTTCTCAGTGTGTGTTGCTGAATGT GGACTGGCAGAATTGATGCCACCAAGTTCAGTCACTCAGGTAAGCTATAATATTGTGTTT CATGTTTCTAGAACGACTAAAACGGGGATAATGCAATCATGGTTCTATTTAGTATTTACA TCTTTTCGCCATGTCCAGTCTGTTTGA

Peptide Sequence

PEP ID	Zm00001d046889_P008
PEP Infomation	pep chromosome:B73_RefGen_v4:9:108888332:108896721:-1 gene:Zm00001d046889 transcript:Zm00001d046889_T008 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein STRUBBELIG-RECEPTOR FAMILY 1
Sequence	MQRAPERRRGAGPLLLLALLVALAAAPRLVRAVTDATDVSAINGLYMSLGSPLLPGWTGN GGDPCGESWQGVVCTGSSITGITMNAANLGGQLGSLGNFTAITSLELNNNNIGGTIPEDL PVTLQSLFLSANQLTGSIPSSLSKLENLTAMSVNGNHLNGDLPDTFDSLNRLVNLDISSN NLSGVLPSSMKNLASLTSLHMQDNQLSGTLNVLQDLPLKDLNIENNLFSGPVPASLLNIP NFKKDGNPFNTSIVPSASPPSTGPAPTPAASKPAPTPAPTTSNSTPPAPAPSFPSRSPPP PKTTSNSSEGSTTRDSTSPSKKHSTSTLKIVGFVLAGVVLFIIIVLLVLFCLSKYQERRS RYDHNRSQQARVHHRVEPQIKPPPVQQSNDLKKGSGEVLDRRGHELSSSTAALAKKSPEN QKEHVINFDRTDSDLFPVSLPPPPPPPPLPPIERVIANPIVPPEKRYSPPPKTSSSTSAT SFSIASLQQYTNSFREENVIRESRLGKVYLAELPDGKLLEVLKIDNANGRISVDDFLEEV ECILDIKHPNILELVGYCAEYGQRLLVYNHFSRTTLDDTLHDGEDTESALSWNARLQVAL GSGKALEYLHASFQPPIVHQNFEPANVLLDKKFSVCVAECGLAELMPPSSVTQVSYNIVF HVSRTTKTGIMQSWFYLVFTSFRHVQSV

Transcript Sequence

Transcript ID	Zm00001d046889_T008
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:108888332:108896721:-1 gene:Zm00001d046889 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein STRUBBELIG-RECEPTOR FAMILY 1
Sequence	CAGTTGCGTCGCTGCTCATCCCAGACTCCCAGCCCCAGTCCCGTACCCCAACCATCTCCT CTGTCTCCGCCTCGTCGCTTCCGCCCACTCTTCCTCGCCGCTGCCTCACGGCCCCATTGC TCCGAGCGCGGCGCCGGTCGCGATCCGACCGGGGGTGCGCGGCGCCGAATGGTGTGATCG ACCCCGTCGGGAATTGGGATCGAGGTCATGCAGCGGGCTCCGGAGCGCCGCCGCGGCGCC GGGCCGCTCCTGCTGCTGGCGCTGCTCGTCGCATTGGCGGCCGCGCCCAGACTCGTGCGC GCGGTCACCGACGCTACCGACGTCTCTGCCATAAACGGACTGTACATGTCACTGGGATCA CCACTTCTACCTGGATGGACTGGAAATGGTGGAGACCCGTGCGGTGAGAGCTGGCAGGGT GTTGTGTGTACCGGCTCTTCCATAACTGGAATAACCATGAATGCTGCAAACTTGGGAGGA CAGTTGGGAAGTTTAGGAAACTTCACTGCCATCACCAGCTTAGAGCTTAACAACAATAAT ATTGGTGGAACCATACCGGAGGACCTACCTGTTACATTGCAGAGTCTTTTCCTCTCTGCT AATCAACTTACTGGAAGCATCCCAAGTTCACTGTCAAAACTCGAAAACTTAACAGCCATG TCAGTCAACGGCAACCATCTAAATGGAGACCTACCAGACACTTTTGATTCACTCAATAGA CTTGTAAATTTGGATATTTCTTCGAACAACTTGAGTGGTGTGTTACCATCTTCAATGAAA AACCTGGCATCTTTGACTTCATTGCACATGCAAGATAATCAACTGTCTGGGACCCTTAAC GTTTTGCAGGATCTCCCACTGAAAGACTTGAACATAGAGAATAATCTTTTTTCTGGACCG GTGCCTGCGAGTTTGCTTAACATACCAAACTTCAAAAAGGACGGGAATCCATTCAATACC AGCATCGTCCCATCTGCATCTCCGCCTTCAACAGGACCAGCTCCAACACCAGCAGCATCA AAACCAGCTCCAACACCAGCACCCACCACTTCAAATTCAACGCCCCCAGCACCAGCACCC TCATTTCCTTCAAGATCTCCTCCCCCGCCTAAAACAACCTCAAACTCTTCTGAAGGATCA ACTACCCGAGATAGCACTTCACCATCTAAGAAACACAGTACATCAACCCTCAAGATTGTT GGCTTTGTTCTTGCCGGAGTAGTGCTGTTTATTATCATAGTCCTCCTAGTATTATTTTGT CTATCCAAGTACCAAGAGAGACGGTCGAGATATGATCATAACAGAAGTCAGCAGGCAAGG GTGCATCATAGGGTTGAACCGCAAATCAAGCCACCTCCAGTGCAACAAAGCAATGATCTT AAAAAAGGTTCAGGTGAGGTACTTGATAGAAGGGGCCATGAACTAAGTTCATCAACGGCA GCTCTCGCAAAGAAATCTCCTGAAAACCAAAAGGAGCATGTAATTAATTTTGATCGAACA GATTCAGATCTGTTTCCTGTTTCTCTACCACCACCACCTCCTCCACCTCCATTACCCCCA ATTGAAAGAGTTATTGCAAATCCCATTGTTCCACCAGAAAAGCGATATAGTCCTCCACCA AAGACAAGTAGCTCTACTTCTGCCACATCATTCTCTATTGCATCTCTTCAGCAATATACA AATAGCTTCAGAGAGGAGAATGTGATAAGAGAGAGTAGATTAGGAAAGGTTTACCTAGCA GAGCTTCCTGATGGCAAGTTATTGGAGGTTTTGAAGATTGACAATGCTAATGGAAGAATA TCAGTAGATGACTTCCTAGAAGAGGTTGAATGTATCTTAGATATCAAGCATCCTAACATT CTTGAGTTAGTCGGATACTGTGCTGAATATGGGCAGAGGTTACTTGTGTACAATCACTTT AGCAGAACGACACTAGATGACACACTTCATGATGGAGAGGATACTGAAAGTGCACTGTCA TGGAATGCCCGCCTCCAGGTTGCTCTTGGTTCTGGAAAAGCCTTAGAGTATCTCCATGCT AGCTTCCAACCTCCAATTGTGCACCAGAATTTTGAACCAGCTAATGTGCTCCTTGACAAA AAGTTCTCAGTGTGTGTTGCTGAATGTGGACTGGCAGAATTGATGCCACCAAGTTCAGTC ACTCAGGTAAGCTATAATATTGTGTTTCATGTTTCTAGAACGACTAAAACGGGGATAATG CAATCATGGTTCTATTTAGTATTTACATCTTTTCGCCATGTCCAGTCTGTTTGAATTGCT CACATTACTATGGTTGAAATATCTCAAGCTTTGAATATCATCGTGAATCCTTGATTCATA GGTGTTAATGATCAACACTTTTATGAGGCTTAACATTTACTTGTTCACTGTAGGATAGTT TCTGTTGACAAGCCAGGGATTTCCCATGTTGTAAATTGTAATCAACTTAACTACTGCAAT TGCCTATTGCCACATTTCTATCTTCTCAATGTTTTTCAATAAGTACATTTAATCCTTTAG CTATTCTGTTGTTCATAGCAAGCTAATATGCTTTACTGATGGTGGGTGCAAAGGCCCTGT GGAACCTCCAGTGCTAGGTCTAGTGGCTGTGACTGCAGTAGATCTTAATCAAAAGGCTAA CCCCATTGTAGATTTGGCATGTAATTAAATCGCTTTCTGTTAATGCAATGACACACAATG TTTTTGAGTGTTCGAGGAAAAAATATTTGAAAGGCCTGGAACAGAGTAACTGAATGTTGA TGGCAAAAAATCATGTAATATATGCAAATAAGGTCTGTACAACGGGGATGATGGAATGGT GATAATAAATCCACTACTCCAGCAACTCCTTGTAGCTCAGTTGAGTAACTATATCCTCAC TGACATAGTTCTATGTCAGCTTGTGACTCATCTTGTTACAAAATGCTACATACCCCTTTG GTTTGAACTTGGAAGCGACTAAATTGTGGTTTATGTAAATACTCTATCTCATAAAATAAG ACATGCATGTTTTTTTTTAAAAAAAGTCAATGTTTTAAAACTTTTTGACTAATAATTCAG CTAAAACACATATTTTTAGTTTATGTATTTTATATTTGGTTTGGTGAAGTGTTTGCAATA GGGATCATAAAGACAAGAAGGGCATTAATAGTGCCATTATTTTAGGGGCATGGTGTTTGT GGTTACAATGTAACCGGGGTAGTCTTTCATGGTGATCCTCCTTCCATCAGCAAGGTGCAA AGAAGTTTCTTGGATGAAATGGCGTGTTGTGTTCTAGCTAGAGCCAAACATCTCGGAAGT TTAGGCTTAGATGAAGCCCTTAGTGTGGTCGGGTAAAGGGTGTATTTGGTTTGGCTTTTG GCTTTGGCTTTTGCCCCATAAAAGCCAAAAGCCAACCAAAGAGTTGGATCCAAGAAGCAG CTTTTTCTAAAAGCCGACTTTCTCGTAGTGCAAAACTGAAAGCACCCCTGGACCTGCTTT TAGTGGCTTTTGGATGGAACTGTGAAAACATATATCGAAGAACTTTTAACGACTTTTAGT GGTTTCCACCAAACGATTTTTAGCTTTTTAACAGCACACAGCCTACAACAGCTTTTTCCA CAGCTCACAGCTCACAGTAACTTTTTTCACAGCTACAGCCCAACCAAACAGACCCAAAGT AGCAAAAAGGGCATCTAGCCTAGTAGTTAAGGGCTTCCAACTAGCACCTCCAAGTCCTAG GTTCGATCCCCCTCGGGGGCGAATTTTCAGACTTGGTTAAAAAAATCTCCTCATTGTGCC CCATCTGCTCTCGGATTACGATGTCCTGTGCGCCACCCTCCGGTTGGGCCGTTGCAGAGT GGAAAGTTGACGCCGACCCGCTAGTGATGGGGCGACATTGTTCGGGGATTTTCTCGGCCG GGATCATTGTTTCGGTCTCTTTTTAATATAATATCGGGAAACCAGTCTTTCCCTCCCCGG CCGATTTGTGGTCGGGTCAAGTACCTAGGTTGTTTTTTAGCTTTAAGTGTGTGAGTTATC TTGGGGGTTCCTGCGTTGCAGATTTCTCCCTTCTTGTAGGATGTGATGTTCTCTTCTCTC TAATATATTATGATGCGCAACTCTTCTGCGCGTTTCGAGCGTTTTATATTTATTGATGGT ATATTTTAAAAGAAATAAATGGTCAGAGTTCTGCTCTAAAGACCGTGCCAAAAAAGTATG TCTTATTTTATGGGATGGAGGGAGTATGTTGATTACCTTATCGGCTCAAGGTCGATGCTT ATGCTTTCCTAGGCTCATCACAAATGATGGCTTCGTTTGTTTTATGTTGCTAGGTGTGAC AAAATGCATCTTCTTGTGTTGAAGGGCAGAAATTGCAAGTTGACTAGCTCTTGTTTATTC ATTGCAGCTGTCAGGTCGGATGCGTGCATTACTGAACTACGAAGCACCTGAGTTGCAGGA TTCTGGGGTCGTTTCAGAAAGGGGTGATGTATACAGCTTTGGTGTAGTGATGCTGGAACT TCTTACTGGGCGTAAACCATATGACAGTTCACGCCCGCGTCATGAGCAACATCTTGTTAG ATGGGCCAGTTCTCAGCTTCATGACATAGAATCCCTGTCCAAGATGGTGGACCCATCTAT ACGTGGACAATGTTCTGAGAAAGCATTGTCACGTTTCGCTGACATAATCAGCCGCTGTAT CCAGCAGCAGCCAGAATTCAGGCCACCAATGTCTGAAATTGTACAAGACCTAGCTAGACT TGTAAATGCCACCGGTGAGGAATCAGAGTAACCCCCAAAAAAAGCATGGAGCCATGGAAG GCATACAATACAAACGTCGCGACCAAGTTACGTGCTGTACAATTTTTTTGGGAAGATAAT TGTCTTGCTTGGTCTGGGGAGAATACTGTGAAGATGTATTTTCCTCAGAGAGCATTGCAC ACTAATGTCAGATTGGAATTTCATTTAGACCTGGCTGGGGAGTGGAGGTGCAGCCATCTG TGCACCTGATTGTTGATCAAATCCATGTAATATTTTTGCAGACATGATATTATATATAGC GACAGTGGCGGAGCCTCCGCCAAGCGC