Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d046855_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:9:108417554:108419212:1 gene:Zm00001d046855 gene_biotype:protein_coding transcript_biotype:protein_coding description:GDP-L-fucose synthase 1

Sequence

ATGGGCACCGTCACTGCCGCAGATCCGCACCCGTCCTTCCTCGCCGACAAGGACGCCAAG
GTCTTCGTCGCCGGCCACCGGGGCCTCGTCGGCTCCGCCATCGTGCGCCGCCTCCTCTCG
CTAGGCTTCACCTCCGTCGTCGTCCGCACCCACGCCGAGCTCGACCTGACTCGCCAGGCG
GACGTCGAGGCCTTCTTCGCCGCAGAACGCCCGCGCTACGTGGTCCTCGCCGCCGCCAAG
GTCGGCGGAATCCACGCCAACTCCACCTTCCCCGCCGACTTCATCGCCGCCAACCTCCAG
ATCCAGACCAACGTCGTCGACGCCGCGCTGCGCTGCGGCTCCGTCCGCAAGCTCCTCTTC
CTCGGCTCCTCCTGCATCTACCCCAAGTTCGCGCCGCAGCCCATCACGGAGGGCGCGCTC
CTCTCCGGCCCGCTCGAGCCCACCAACGAGTGGTACGCCGTCGCCAAGATCGCCGGCATC
AAGATGTGCCAGGCCTACCGCATCCAGCACGGCCTCGACGCCGTCTCTGCCATGCCCACC
AACCTGTATGGCCCGCACGACAACTTCCACCCGGAGAACTCGCACGTCCTGCCCGCGCTC
ATCCGTCGCTTCCACGAGGCCAAGGCTACTAACGCCCCCGAGGTCGTCGTCTGGGGATCA
GGCTCGCCTCTGCGCGAGTTCCTGCACGTCGATGATCTCGCCGACGCCGTCATCTTCCTG
ATGGATCACTACTCCGGCATGGAGCATGTCAATGTGGGGAGTGGGAGTGAGGTCACCATC
AAGGAGCTCGCCGAACTAGTCAAGGAGGTGGTCGGCTTCCAGGGGAACCTGGTGTGGGAC
TCCAGCAAGCCGGACGGCACACCCAGGAAGCTCATGGATAGCTCCAAGATACAGGGGATG
GGGTGGAAGCCCAAGATCGCCCTCAAGGAAGGCCTCGTGGAAACCTACAAATGGTACGTC
GAGAATGTCATCTCGAACAAGAAGTAG

Peptide Sequence

PEP ID

Zm00001d046855_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:9:108417554:108419212:1 gene:Zm00001d046855 transcript:Zm00001d046855_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:GDP-L-fucose synthase 1

Sequence

MGTVTAADPHPSFLADKDAKVFVAGHRGLVGSAIVRRLLSLGFTSVVVRTHAELDLTRQA
DVEAFFAAERPRYVVLAAAKVGGIHANSTFPADFIAANLQIQTNVVDAALRCGSVRKLLF
LGSSCIYPKFAPQPITEGALLSGPLEPTNEWYAVAKIAGIKMCQAYRIQHGLDAVSAMPT
NLYGPHDNFHPENSHVLPALIRRFHEAKATNAPEVVVWGSGSPLREFLHVDDLADAVIFL
MDHYSGMEHVNVGSGSEVTIKELAELVKEVVGFQGNLVWDSSKPDGTPRKLMDSSKIQGM
GWKPKIALKEGLVETYKWYVENVISNKK

Transcript Sequence

Transcript ID

Zm00001d046855_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:108417554:108419212:1 gene:Zm00001d046855 gene_biotype:protein_coding transcript_biotype:protein_coding description:GDP-L-fucose synthase 1

Sequence

CCCAATTCCCCGTCCAGCGAGGCAGCGGCGACTGCAATTCTCATCCGAACCCGATCATCT
CCGGCCGCCGCTCCCTCCGGACCCTCCGTCGACATGGGCACCGTCACTGCCGCAGATCCG
CACCCGTCCTTCCTCGCCGACAAGGACGCCAAGGTCTTCGTCGCCGGCCACCGGGGCCTC
GTCGGCTCCGCCATCGTGCGCCGCCTCCTCTCGCTAGGCTTCACCTCCGTCGTCGTCCGC
ACCCACGCCGAGCTCGACCTGACTCGCCAGGCGGACGTCGAGGCCTTCTTCGCCGCAGAA
CGCCCGCGCTACGTGGTCCTCGCCGCCGCCAAGGTCGGCGGAATCCACGCCAACTCCACC
TTCCCCGCCGACTTCATCGCCGCCAACCTCCAGATCCAGACCAACGTCGTCGACGCCGCG
CTGCGCTGCGGCTCCGTCCGCAAGCTCCTCTTCCTCGGCTCCTCCTGCATCTACCCCAAG
TTCGCGCCGCAGCCCATCACGGAGGGCGCGCTCCTCTCCGGCCCGCTCGAGCCCACCAAC
GAGTGGTACGCCGTCGCCAAGATCGCCGGCATCAAGATGTGCCAGGCCTACCGCATCCAG
CACGGCCTCGACGCCGTCTCTGCCATGCCCACCAACCTGTATGGCCCGCACGACAACTTC
CACCCGGAGAACTCGCACGTCCTGCCCGCGCTCATCCGTCGCTTCCACGAGGCCAAGGCT
ACTAACGCCCCCGAGGTCGTCGTCTGGGGATCAGGCTCGCCTCTGCGCGAGTTCCTGCAC
GTCGATGATCTCGCCGACGCCGTCATCTTCCTGATGGATCACTACTCCGGCATGGAGCAT
GTCAATGTGGGGAGTGGGAGTGAGGTCACCATCAAGGAGCTCGCCGAACTAGTCAAGGAG
GTGGTCGGCTTCCAGGGGAACCTGGTGTGGGACTCCAGCAAGCCGGACGGCACACCCAGG
AAGCTCATGGATAGCTCCAAGATACAGGGGATGGGGTGGAAGCCCAAGATCGCCCTCAAG
GAAGGCCTCGTGGAAACCTACAAATGGTACGTCGAGAATGTCATCTCGAACAAGAAGTAG
GGCCGTGACATGCCAGTGGTGCTGTCTTGCTCTCCGTTGCTGCTTCCACAAGGTGGTTGG
ATATCTGATCATACGGTTATCAGTTTTAAGTTAACCCACATAGAAGAGGCTTGTTATGTT
ATGTGTTGCCTCACCTGAATAATCTGTGGGTCAAGTTAGTATACTGCTACAAGCATAATT
GATCTGGAACACTTTTTGTTGAATAGAGGAAGTTTAATGACCAAGATGATGATGGATTGA
TGTTCTTGGTCTAGAAACAACTGCTTGCTGACCAAGCTCTGTTTGATTTCTGAGATACCA
CAATGTGTTCAGAAACATCCATTGCTTCATTTCCTTTAGTTTGTACTCTACTGATCACAT
TGAGAGGAACATCTGATCAAAGAAGATGTTGCTTTCAACTGATTGTAATGCTATGATTTG
GATCCAAGAGTTCAAAAGGCCAATTAGTATGCGACTGTTTTTGTATTTGGGTAACCACTG
TTTGAGTAGGCACTTCT