Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d046838_T005
CDS Infomation

cds chromosome:B73_RefGen_v4:9:108226648:108229952:1 gene:Zm00001d046838 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative receptor-like protein kinase family protein

Sequence

ATGATGGCTACTTTGGGGAGGAAGAAGCGGCAAGCCGCAACAACCTTCATCGTGCTTTGC
ATCTTGTCATCCTTCTACATCTGCAAAGCGCAGTTCACGCCTGCGGACAGCTACCTTGTT
GACTGTGGGTCCTCCAAGAGCACAATGGTTGGCCAGAGGACCTTCACAGCGGATGGCGCA
TCTCCGGTGAAGGTGTCCACCTCCCAGGATATACTTGCGGGCACCTCAGCAAACGGGGTG
GCCTCTTTTGATAACTCGGCGCTGTACCAGACTGCCCGGATCTTCACCGGGCCATCATCC
TACACTTTCCCTATCCAGAAGCAGGGCCGGCATTTCGTCCGGTTTTACTTCTTCCCCTTC
ACCTACCAGAGCTATGATCTTTCACTTGCCAAATTTACTGTGTCCACCCAAGATGTTCTC
CTGCTTAGTGACTTCCAGCAACCAGACAAGACCGCACCCTTGTTCAAGGAATACTCACTG
AATATCACCCGCGACACGCTCGTGATTTCCTTCAAGCCGTCAAATGGAATTGCATTTGTC
AACGCAATTGAGGTGGTCTCTGTCCCAGATGATCTCATCACCGATGATGCACAAATGGTC
AACCCTGTCCAGCAGTACAGTGGTTTGTCTACACAGCCACTGGAGACAGTATATCGGGTT
AACATGGGTGGTCCGAAGGTCACTCCTGACAATGATACCCTCTCGAGGACCTGGGTGACT
GATCTAAAGTACTTGTTGAACCCATCTGTGACCAAACAGGTTAATTATGGCAAGCGTGTC
AACTATAAGAAGGGTGGAGGTGGAGCTACTCAGCTGTCAGCCCCTGATATTGTCTATGGC
ACAGCTACAGAGTTGGCAGCGACAAATACATCCAATGCTCTTTTCAACATGACATGGCAG
TTTGATGTGGATGCTGGCTTCAGCTATTTGGTAAGGTTTCACTTCTGTGATATTGTCAGC
AAGGCACTTAACCAGCTCTACTTCAATGCATATGTTGGAGGCTTTTATGCACAGAATAAT
CTTGATCTGTCAGCAATGTCTGATAGTCAGTTAGCTACACCTATATATATAGATGTGGTT
CTTTCATCTAATGATGCATCCAGCAAACTTAGCATCAGCATTGGCCCATCGGTCTTGAAC
AATGTATTGCCCGACGGGATTCTGAATGGGCTTGAGGTTATGAAGATAAGTACCGGAGGT
TCTGCTTTCACTGTCGGGTCTGGCAGTGGAAACAAAAAATGGGGTGTGATTCTTGGCGCA
GCCCTCGGAGGTGTTGGACTGTTTATAATTGTTGTTGTTCTTGTACTTCTTTGCCGGAGG
AAAAAGACCCTGGAAAAGCAGCATTCAAAGACCTGGATGCCTTTCTCTATCAATGGGCTC
ACCTCTCTCAGCACAGGAAGCAGAACGTCTTATGGTACTACTCTCACATCAGGGCTGAAT
GGAAGCTATGGATACCGTTTTGCCTTCAGTGTGCTCCAAGAAGCAACAAACAATTTCGAC
GAGAACTGGGTCATTGGAGTTGGAGGCTTTGGAAAGGTCTACAAGGGGGTGATGAGGGAT
GAGAGCAAGGTTGCAGTGAAGCGTGGAAACCCAAAGTCTCAGCAAGGTCTCAACGAGTTC
CGTACAGAGATTGAGCTCCTCTCACGTCTGCGCCACCGCCATTTGGTGTCTCTGATTGGG
TACTGTGATGAAAGGAACGAAATGATCCTGGTCTACGAGTACATGGAGAAAGGCACTCTC
AAGAGCCATCTCTATGGCTCCGATAACCCCTCGCTCAATTGGAAGCAGAGGCTGGAGGTT
TGCATCGGAGCAGCAAGGGGGTTGCACTACCTTCACACTGGATCTGCGAAGGCCATCATC
CATCGTGATGTCAAGTCCGCAAACATCTTGCTCGACGAGAACCTCCTCGCCAAGGTCGCT
GACTTTGGGCTATCCAAGACTGGGCCTGAGCTCGACCAAACTCATGTCAGCACTGCAGTG
AAGGGCAGCTTCGGGTACCTCGATCCTGAATATTTCCGGAGGCAGCAGCTGACCGAGAAG
TCGGATGTCTACTCTTTCGGTGTTGTTTTGCTTGAGGTTCTTTGTGCAAGGCCAGTGATC
GACCCCACGCTGCCGAGGGAGATGGTGAACCTGGCCGAGTGGGGGATGAAGTGGCAGAAG
AGAGGAGAGCTGCACCAGATCATCGATCAGAGGATCTCGGGCACAATCAGGCCGGACTCT
CTGAGGAAGTTTGGCGAGACCGTGGAGAAGTGCCTGGCAGACTACGGCGTGGAGCGGCCG
TCGATGGGAGACGTCCTCTGGAACCTGGAGTACGTTCTGCAGCTTCAGGACGCCGATTCG
ACGGTCTCGGATGTGAACAGCATGAACCGTATCGTGGAACTCCCGTCACAGGTCCAGAAC
GTCGGGGCCCTCGAGAGCATCAGCGTGACGATGGCAGAAGCCGGAGCGTCAAACGAGCCT
GACCACGACCTCTCCGATGTGTCCATGAGCCGCGTCTTCTCTCAGCTGATCAAGGCCGAG
GGGAGGTAA

Peptide Sequence

PEP ID

Zm00001d046838_P005
PEP Infomation

pep chromosome:B73_RefGen_v4:9:108226648:108229952:1 gene:Zm00001d046838 transcript:Zm00001d046838_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative receptor-like protein kinase family protein

Sequence

MMATLGRKKRQAATTFIVLCILSSFYICKAQFTPADSYLVDCGSSKSTMVGQRTFTADGA
SPVKVSTSQDILAGTSANGVASFDNSALYQTARIFTGPSSYTFPIQKQGRHFVRFYFFPF
TYQSYDLSLAKFTVSTQDVLLLSDFQQPDKTAPLFKEYSLNITRDTLVISFKPSNGIAFV
NAIEVVSVPDDLITDDAQMVNPVQQYSGLSTQPLETVYRVNMGGPKVTPDNDTLSRTWVT
DLKYLLNPSVTKQVNYGKRVNYKKGGGGATQLSAPDIVYGTATELAATNTSNALFNMTWQ
FDVDAGFSYLVRFHFCDIVSKALNQLYFNAYVGGFYAQNNLDLSAMSDSQLATPIYIDVV
LSSNDASSKLSISIGPSVLNNVLPDGILNGLEVMKISTGGSAFTVGSGSGNKKWGVILGA
ALGGVGLFIIVVVLVLLCRRKKTLEKQHSKTWMPFSINGLTSLSTGSRTSYGTTLTSGLN
GSYGYRFAFSVLQEATNNFDENWVIGVGGFGKVYKGVMRDESKVAVKRGNPKSQQGLNEF
RTEIELLSRLRHRHLVSLIGYCDERNEMILVYEYMEKGTLKSHLYGSDNPSLNWKQRLEV
CIGAARGLHYLHTGSAKAIIHRDVKSANILLDENLLAKVADFGLSKTGPELDQTHVSTAV
KGSFGYLDPEYFRRQQLTEKSDVYSFGVVLLEVLCARPVIDPTLPREMVNLAEWGMKWQK
RGELHQIIDQRISGTIRPDSLRKFGETVEKCLADYGVERPSMGDVLWNLEYVLQLQDADS
TVSDVNSMNRIVELPSQVQNVGALESISVTMAEAGASNEPDHDLSDVSMSRVFSQLIKAE
GR

Transcript Sequence

Transcript ID

Zm00001d046838_T005
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:108226648:108229952:1 gene:Zm00001d046838 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative receptor-like protein kinase family protein

Sequence

CGGCATTCTCTCTCTCTGTCTCTGGTGCCGACGACCGCGCGGCCGACCCCGCCCTACGCC
AGGTGCTCAGGTCTCCATCTTCGGGACCTTCGCCGGCGACGAGCACCCGCCCAGGTCAAC
ATCATGATGGCTACTTTGGGGAGGAAGAAGCGGCAAGCCGCAACAACCTTCATCGTGCTT
TGCATCTTGTCATCCTTCTACATCTGCAAAGCGCAGTTCACGCCTGCGGACAGCTACCTT
GTTGACTGTGGGTCCTCCAAGAGCACAATGGTTGGCCAGAGGACCTTCACAGCGGATGGC
GCATCTCCGGTGAAGGTGTCCACCTCCCAGGATATACTTGCGGGCACCTCAGCAAACGGG
GTGGCCTCTTTTGATAACTCGGCGCTGTACCAGACTGCCCGGATCTTCACCGGGCCATCA
TCCTACACTTTCCCTATCCAGAAGCAGGGCCGGCATTTCGTCCGGTTTTACTTCTTCCCC
TTCACCTACCAGAGCTATGATCTTTCACTTGCCAAATTTACTGTGTCCACCCAAGATGTT
CTCCTGCTTAGTGACTTCCAGCAACCAGACAAGACCGCACCCTTGTTCAAGGAATACTCA
CTGAATATCACCCGCGACACGCTCGTGATTTCCTTCAAGCCGTCAAATGGAATTGCATTT
GTCAACGCAATTGAGGTGGTCTCTGTCCCAGATGATCTCATCACCGATGATGCACAAATG
GTCAACCCTGTCCAGCAGTACAGTGGTTTGTCTACACAGCCACTGGAGACAGTATATCGG
GTTAACATGGGTGGTCCGAAGGTCACTCCTGACAATGATACCCTCTCGAGGACCTGGGTG
ACTGATCTAAAGTACTTGTTGAACCCATCTGTGACCAAACAGGTTAATTATGGCAAGCGT
GTCAACTATAAGAAGGGTGGAGGTGGAGCTACTCAGCTGTCAGCCCCTGATATTGTCTAT
GGCACAGCTACAGAGTTGGCAGCGACAAATACATCCAATGCTCTTTTCAACATGACATGG
CAGTTTGATGTGGATGCTGGCTTCAGCTATTTGGTAAGGTTTCACTTCTGTGATATTGTC
AGCAAGGCACTTAACCAGCTCTACTTCAATGCATATGTTGGAGGCTTTTATGCACAGAAT
AATCTTGATCTGTCAGCAATGTCTGATAGTCAGTTAGCTACACCTATATATATAGATGTG
GTTCTTTCATCTAATGATGCATCCAGCAAACTTAGCATCAGCATTGGCCCATCGGTCTTG
AACAATGTATTGCCCGACGGGATTCTGAATGGGCTTGAGGTTATGAAGATAAGTACCGGA
GGTTCTGCTTTCACTGTCGGGTCTGGCAGTGGAAACAAAAAATGGGGTGTGATTCTTGGC
GCAGCCCTCGGAGGTGTTGGACTGTTTATAATTGTTGTTGTTCTTGTACTTCTTTGCCGG
AGGAAAAAGACCCTGGAAAAGCAGCATTCAAAGACCTGGATGCCTTTCTCTATCAATGGG
CTCACCTCTCTCAGCACAGGAAGCAGAACGTCTTATGGTACTACTCTCACATCAGGGCTG
AATGGAAGCTATGGATACCGTTTTGCCTTCAGTGTGCTCCAAGAAGCAACAAACAATTTC
GACGAGAACTGGGTCATTGGAGTTGGAGGCTTTGGAAAGGTCTACAAGGGGGTGATGAGG
GATGAGAGCAAGGTTGCAGTGAAGCGTGGAAACCCAAAGTCTCAGCAAGGTCTCAACGAG
TTCCGTACAGAGATTGAGCTCCTCTCACGTCTGCGCCACCGCCATTTGGTGTCTCTGATT
GGGTACTGTGATGAAAGGAACGAAATGATCCTGGTCTACGAGTACATGGAGAAAGGCACT
CTCAAGAGCCATCTCTATGGCTCCGATAACCCCTCGCTCAATTGGAAGCAGAGGCTGGAG
GTTTGCATCGGAGCAGCAAGGGGGTTGCACTACCTTCACACTGGATCTGCGAAGGCCATC
ATCCATCGTGATGTCAAGTCCGCAAACATCTTGCTCGACGAGAACCTCCTCGCCAAGGTC
GCTGACTTTGGGCTATCCAAGACTGGGCCTGAGCTCGACCAAACTCATGTCAGCACTGCA
GTGAAGGGCAGCTTCGGGTACCTCGATCCTGAATATTTCCGGAGGCAGCAGCTGACCGAG
AAGTCGGATGTCTACTCTTTCGGTGTTGTTTTGCTTGAGGTTCTTTGTGCAAGGCCAGTG
ATCGACCCCACGCTGCCGAGGGAGATGGTGAACCTGGCCGAGTGGGGGATGAAGTGGCAG
AAGAGAGGAGAGCTGCACCAGATCATCGATCAGAGGATCTCGGGCACAATCAGGCCGGAC
TCTCTGAGGAAGTTTGGCGAGACCGTGGAGAAGTGCCTGGCAGACTACGGCGTGGAGCGG
CCGTCGATGGGAGACGTCCTCTGGAACCTGGAGTACGTTCTGCAGCTTCAGGACGCCGAT
TCGACGGTCTCGGATGTGAACAGCATGAACCGTATCGTGGAACTCCCGTCACAGGTCCAG
AACGTCGGGGCCCTCGAGAGCATCAGCGTGACGATGGCAGAAGCCGGAGCGTCAAACGAG
CCTGACCACGACCTCTCCGATGTGTCCATGAGCCGCGTCTTCTCTCAGCTGATCAAGGCC
GAGGGGAGGTAAATGTGCGTGACGCAGCCTGTAGGGTGTGGGTGGTGGGGAGGAAGCCTT
CAAAGTCATCTCTTGCTGAAGTTTACGTGAGAGAGATCATGTGTGATTTTTTTTCTTCTT
TTCGTCTACAAATGTACTACTGAAGTGAACTATGGTTTCGAGTTACAGTTTTAGCCATTG
TGAGCCTGTGCGGCTACAAATTTC